Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0257421 Helianthus annuus HOM05D007471 ORTHO05D009481 4.7e-129 464.5 236 100.0
Lsat_1_v5_gn_9_102921 Lactuca sativa HOM05D007471 ORTHO05D009481 2.3e-91 339.3 238 72.3
ECA240G3131 Erigeron canadensis HOM05D001349 ORTHO05D001980 4.5e-79 298.5 238 66.4
Lj8A138T38 Lonicera japonica HOM05D007471 ORTHO05D009481 9.4e-69 264.2 245 57.1
Dinv05327 Davidia involucrata HOM05D007471 ORTHO05D009481 2.3e-67 259.6 244 55.7
CSS0003771 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 2.0e-66 256.5 245 54.3
TAR626G0037 Trochodendron aralioides HOM05D007471 ORTHO05D009481 1.3e-65 253.8 245 53.9
Actinidia12353 Actinidia chinensis HOM05D007471 ORTHO05D009481 1.5e-63 246.9 244 51.2
QL04p066931 Quercus lobata HOM05D007471 ORTHO05D009481 1.7e-62 243.4 244 51.2
Cpa.g.sc136.59 Carica papaya HOM05D007471 ORTHO05D009481 7.2e-61 238.0 243 50.6
Hma1.2p1_0599F.1_g186930 Hydrangea macrophylla HOM05D007471 ORTHO05D009481 2.7e-60 236.1 243 51.0
Lj6g0025127 Lotus japonicus HOM05D007471 ORTHO05D009481 1.4e-59 233.8 244 51.2
Rhsim06G0179200 Rhododendron simsii HOM05D000358 ORTHO05D001562 5.2e-59 231.9 243 50.2
Manes.12G067200 Manihot esculenta HOM05D007471 ORTHO05D009481 1.7e-57 226.9 245 49.0
MD17G1122600 Malus domestica HOM05D007471 ORTHO05D009481 2.8e-57 226.1 242 47.1
MSTRG.6626 Avicennia marina HOM05D007471 ORTHO05D009481 3.7e-57 225.7 241 51.5
TWI36G0936 Tripterygium wilfordii HOM05D007471 ORTHO05D009481 3.7e-57 225.7 243 48.6
MD17G1121200 Malus domestica HOM05D007471 ORTHO05D009481 6.3e-57 224.9 242 47.9
Migut.M00062 Erythranthe guttata HOM05D007471 ORTHO05D009481 1.4e-56 223.8 244 49.6
Psat1g019920 Pisum sativum HOM05D007471 ORTHO05D009481 1.8e-56 223.4 245 49.8
Cc05_g01930 Coffea canephora HOM05D007471 ORTHO05D009481 4.1e-56 222.2 246 48.0
RcHm_v2.0_Chr2g0155251 Rosa chinensis HOM05D007471 ORTHO05D009481 4.1e-56 222.2 242 48.3
Lalb_Chr10g0094201 Lupinus albus HOM05D007471 ORTHO05D009481 9.1e-56 221.1 244 48.8
Nn1g07565 Nelumbo nucifera HOM05D007471 ORTHO05D009481 2.6e-55 219.5 245 48.2
Sc21g0000400 Simmondsia chinensis HOM05D007471 ORTHO05D009481 3.5e-55 219.2 247 47.8
GSVIVG01030129001 Vitis vinifera HOM05D007471 ORTHO05D009481 5.9e-55 218.4 239 49.0
Nitab4.5_0003086g0070 Nicotiana tabacum HOM05D007471 ORTHO05D009481 7.7e-55 218.0 244 48.0
Haze_12583 Corylus avellana HOM05D007471 ORTHO05D009481 1.3e-54 217.2 243 49.4
Ciclev10016450m.g Citrus clementina HOM05D007471 ORTHO05D009481 1.7e-54 216.9 246 49.6
FAN09G1454 Fragaria x ananassa HOM05D007471 ORTHO05D009481 3.8e-54 215.7 242 48.3
Peaxi162Scf00359g00320 Petunia axillaris HOM05D007471 ORTHO05D009481 5.0e-54 215.3 242 45.9
Eucgr.K01386 Eucalyptus grandis HOM05D007471 ORTHO05D009481 6.5e-54 214.9 246 45.5
FvH4_6g40230 Fragaria vesca HOM05D007471 ORTHO05D009481 1.9e-53 213.4 242 47.5
FAN05G3962 Fragaria x ananassa HOM05D007471 ORTHO05D009481 2.5e-53 213.0 242 46.7
FAN14G4986 Fragaria x ananassa HOM05D007471 ORTHO05D009481 2.5e-53 213.0 242 47.5
PGR044G0015 Punica granatum HOM05D007471 ORTHO05D009481 4.2e-53 212.2 243 44.0
SalBow7G1274 Salvia bowleyana HOM05D007471 ORTHO05D009481 2.1e-52 209.9 244 46.3
THA.LOC104819026 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 2.1e-52 209.9 246 45.5
Sopen07g023700 Solanum pennellii HOM05D007471 ORTHO05D009481 6.1e-52 208.4 244 47.1
Solyc07g045150.3 Solanum lycopersicum HOM05D007471 ORTHO05D009481 8.0e-52 208.0 244 46.7
CARHR082340 Cardamine hirsuta HOM05D007471 ORTHO05D009481 1.8e-51 206.8 245 46.1
Glyma.09G086000 Glycine max HOM05D007471 ORTHO05D009481 1.8e-51 206.8 244 45.1
Ca_02565_v3 Cicer arietinum L. HOM05D007471 ORTHO05D009481 5.2e-51 205.3 215 51.2
PSO210G0038 Papaver somniferum HOM05D007471 ORTHO05D009481 8.8e-51 204.5 245 44.1
PGSC0003DMG402017414 Solanum tuberosum HOM05D007471 ORTHO05D009481 8.8e-51 204.5 244 46.3
AL3G19000 Arabidopsis lyrata HOM05D007471 ORTHO05D009481 1.2e-50 204.1 245 44.5
Sp3g06580 Schrenkiella parvula HOM05D007471 ORTHO05D009481 2.0e-50 203.4 245 44.9
VMungo1309G3041 Vigna mungo HOM05D007471 ORTHO05D009481 2.0e-50 203.4 244 48.0
Glyma.15G195100 Glycine max HOM05D007471 ORTHO05D009481 3.4e-50 202.6 244 44.7
Thhalv10021420m.g Eutrema salsugineum HOM05D007471 ORTHO05D009481 4.8e-49 198.7 245 44.5
Phvul.009G214800 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 1.1e-48 197.6 244 46.7
ATR0751G158 Amborella trichopoda HOM05D007471 ORTHO05D009481 1.8e-48 196.8 244 46.7
BcaB03g14688 Brassica carinata HOM05D007471 ORTHO05D009481 3.1e-48 196.1 245 42.9
AUR62018237 Chenopodium quinoa HOM05D007471 ORTHO05D009481 3.1e-48 196.1 240 43.8
AUR62037766 Chenopodium quinoa HOM05D007471 ORTHO05D009481 3.1e-48 196.1 240 42.9
AT3G07640 Arabidopsis thaliana HOM05D007471 ORTHO05D009481 5.4e-48 195.3 245 43.7
Medtr2g049140 Medicago truncatula HOM05D007471 ORTHO05D009481 1.2e-47 194.1 244 46.3
MELO3C024177.2 Cucumis melo HOM05D007471 ORTHO05D009481 2.0e-47 193.4 249 41.4
vmacro12060 Vaccinium macrocarpon HOM05D007471 ORTHO05D009481 2.7e-47 193.0 188 52.1
PSO210G4841 Papaver somniferum HOM05D007471 ORTHO05D009481 3.5e-47 192.6 247 42.1
MBI14_g27042_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 7.7e-47 191.4 243 42.8
Sed0023252 Sechium edule HOM05D007471 ORTHO05D009481 7.7e-47 191.4 246 41.5
Carub.0003s0722 Capsella rubella HOM05D007471 ORTHO05D009481 2.2e-46 189.9 247 42.9
CAN.G826.3 Capsicum annuum HOM05D007471 ORTHO05D009481 1.1e-45 187.6 244 43.4
CsaV3_7G002330 Cucumis sativus L. HOM05D007471 ORTHO05D009481 1.9e-45 186.8 249 39.8
BcaC01g04271 Brassica carinata HOM05D007471 ORTHO05D009481 4.2e-45 185.7 245 44.1
C03p43000 Brassica napus HOM05D007471 ORTHO05D009481 4.2e-45 185.7 245 44.1
CSS0004770 Camellia sinensis var. sinensis HOM05D007471 ORTHO05D009481 9.4e-45 184.5 169 53.8
Oeu000672.1 Olea europaea HOM05D007471 ORTHO05D009481 1.6e-44 183.7 189 49.7
DCAR_019662 Daucus carota HOM05D007471 ORTHO05D009481 2.1e-44 183.3 190 51.1
A03p35390 Brassica napus HOM05D007471 ORTHO05D009481 2.7e-44 183.0 245 42.0
BraA03t12717Z Brassica rapa HOM05D007471 ORTHO05D009481 2.7e-44 183.0 245 42.0
BolC3t16568H Brassica oleracea HOM05D007471 ORTHO05D009481 4.7e-44 182.2 245 42.9
Aa31LG5G18220 Aethionema arabicum HOM05D007471 ORTHO05D009481 4.0e-43 179.1 268 39.6
Cfa014199 Carpinus fangiana HOM05D005171 ORTHO05D006343 5.2e-43 178.7 248 42.7
Atru.BG.43.p Acer truncatum HOM05D007471 ORTHO05D009481 9.8e-42 174.5 186 50.5
Phvul.009G215100 Phaseolus vulgaris HOM05D007471 ORTHO05D009481 8.3e-41 171.4 240 43.3
Prupe.3G192700 Prunus persica HOM05D007471 ORTHO05D009481 1.1e-40 171.0 172 50.0
Duzib133G1025 Durio zibethinus HOM05D007471 ORTHO05D009481 5.9e-39 165.2 249 41.8
THA.LOC104822442 Tarenaya hassleriana HOM05D007471 ORTHO05D009481 1.0e-38 164.5 248 40.3
Thecc.01G199800 Theobroma cacao HOM05D007471 ORTHO05D009481 1.3e-38 164.1 249 41.0
ClCG02G003070 Citrullus lanatus HOM05D007471 ORTHO05D009481 2.9e-38 162.9 294 33.3
TPR.G20279 Trifolium pratense HOM05D007471 ORTHO05D009481 3.8e-38 162.5 175 49.1
Gohir.D07G199700 Gossypium hirsutum HOM05D007471 ORTHO05D009481 1.3e-33 147.5 251 37.5
Gohir.A07G193500 Gossypium hirsutum HOM05D007471 ORTHO05D009481 2.9e-33 146.4 251 37.1
Gorai.001G223900 Gossypium raimondii HOM05D007471 ORTHO05D009481 2.9e-33 146.4 251 37.5
Os02g0582400 Oryza sativa ssp. japonica HOM05D007471 ORTHO05D009481 3.7e-33 146.0 239 34.7
Zm00001eb245410 Zea mays HOM05D007471 ORTHO05D009481 6.4e-33 145.2 243 35.4
TPR.G28406 Trifolium pratense HOM05D007471 ORTHO05D009481 3.2e-32 142.9 203 41.4
BcaB03g14686 Brassica carinata HOM05D007471 ORTHO05D009481 3.0e-30 136.3 185 41.1
COL.COLO4_19658 Corchorus olitorius HOM05D007471 ORTHO05D009481 7.3e-29 131.7 176 43.8
CDE11G0370 Ceratophyllum demersum HOM05D007471 ORTHO05D009481 1.2e-28 131.0 251 33.5
SGA_v2.0_scaffold73G24486 Striga asiatica HOM05D007471 ORTHO05D009481 1.6e-28 130.6 255 34.5
FAN02G2672 Fragaria x ananassa HOM05D007471 ORTHO05D009481 6.2e-28 128.6 240 34.6
SHI10184 Sapria himalayana HOM05D007471 ORTHO05D009481 1.2e-26 124.4 166 38.0
MBI14_g39587_MAGBIO Magnolia biondii HOM05D007471 ORTHO05D009481 2.4e-24 116.7 236 31.8
SEGI_00651 Sequoiadendron giganteum HOM05D007471 ORTHO05D009481 6.2e-20 102.1 239 28.9
Lsat_1_v5_gn_3_93600 Lactuca sativa HOM05D007471 ORTHO05D233800 3.7e-17 92.8 110 50.9
Peaxi162Scf00289g00310 Petunia axillaris HOM05D007471 ORTHO05D009481 9.5e-13 78.2 96 45.8
ClCG02G003080 Citrullus lanatus HOM05D007471 ORTHO05D009481 5.1e-06 55.8 75 41.3


User provided reference genes

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