Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 2.7e-135 485.3 242 100.0
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 3.6e-76 288.9 296 59.5
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 1.1e-61 240.7 157 82.2
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 3.1e-59 232.6 261 50.6
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 2.2e-57 226.5 296 47.6
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 2.3e-54 216.5 269 46.8
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 2.5e-48 196.4 296 42.6
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 1.0e-46 191.0 283 42.0
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 3.9e-46 189.1 295 41.4
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 6.7e-46 188.3 293 42.7
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 2.0e-45 186.8 297 41.4
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 2.5e-45 186.4 296 41.6
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 4.3e-45 185.7 283 42.0
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 7.4e-45 184.9 293 42.0
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 9.7e-45 184.5 296 40.9
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 3.7e-44 182.6 146 63.0
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 3.7e-44 182.6 295 40.7
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 6.3e-44 181.8 143 64.3
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 8.2e-44 181.4 294 39.8
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 8.2e-44 181.4 146 62.3
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 1.1e-43 181.0 147 63.9
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 1.1e-43 181.0 295 40.3
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 6.9e-43 178.3 295 39.3
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 1.2e-42 177.6 295 40.0
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 1.2e-42 177.6 295 40.0
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 1.2e-42 177.6 142 62.7
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 2.0e-42 176.8 147 61.9
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 2.6e-42 176.4 142 62.7
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 3.4e-42 176.0 152 60.5
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 3.4e-42 176.0 147 62.6
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 3.4e-42 176.0 147 62.6
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 7.7e-42 174.9 162 58.6
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 7.7e-42 174.9 152 60.5
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 1.3e-41 174.1 143 63.6
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 2.9e-41 172.9 289 39.4
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 5.0e-41 172.2 142 61.3
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 5.0e-41 172.2 142 62.7
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 5.0e-41 172.2 143 63.6
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 1.1e-40 171.0 141 62.4
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 1.9e-40 170.2 142 62.0
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 2.5e-40 169.9 138 63.0
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 2.5e-40 169.9 144 61.8
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 2.5e-40 169.9 143 62.2
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 3.2e-40 169.5 142 62.0
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 4.2e-40 169.1 143 62.2
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 5.5e-40 168.7 136 63.2
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 7.2e-40 168.3 139 63.3
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 7.2e-40 168.3 143 59.4
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 9.4e-40 167.9 143 58.7
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 1.2e-39 167.5 136 61.8
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.2e-39 167.5 264 39.8
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 1.2e-39 167.5 139 63.3
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 1.6e-39 167.2 143 60.8
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 2.7e-39 166.4 138 59.4
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 3.6e-39 166.0 144 58.3
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 4.7e-39 165.6 138 59.4
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 4.7e-39 165.6 143 58.7
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 4.7e-39 165.6 143 58.7
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 6.1e-39 165.2 169 53.3
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 7.9e-39 164.9 143 58.7
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 7.9e-39 164.9 116 72.4
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 1.0e-38 164.5 143 60.8
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 1.4e-38 164.1 139 61.9
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 1.4e-38 164.1 138 59.4
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 1.8e-38 163.7 158 56.3
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 2.3e-38 163.3 139 61.2
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 2.3e-38 163.3 145 60.0
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 3.0e-38 162.9 136 62.5
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 3.9e-38 162.5 142 59.2
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 3.9e-38 162.5 144 57.6
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 3.9e-38 162.5 158 55.7
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 8.8e-38 161.4 158 55.1
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 1.5e-37 160.6 296 37.8
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 1.5e-37 160.6 136 61.8
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 1.5e-37 160.6 143 58.0
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 2.0e-37 160.2 143 58.0
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 2.6e-37 159.8 139 59.0
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 3.3e-37 159.5 139 60.4
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 4.4e-37 159.1 266 41.0
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 5.7e-37 158.7 151 53.6
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 7.4e-37 158.3 144 57.6
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 9.7e-37 157.9 134 61.2
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 1.3e-36 157.5 136 61.0
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 1.3e-36 157.5 156 53.2
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 1.3e-36 157.5 143 58.7
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 1.7e-36 157.1 138 57.2
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 1.7e-36 157.1 137 56.9
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 2.2e-36 156.8 138 56.5
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 3.7e-36 156.0 146 52.7
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 3.7e-36 156.0 142 55.6
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 8.2e-36 154.8 138 58.0
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 3.1e-35 152.9 163 49.7
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 9.1e-35 151.4 147 52.4
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 1.6e-34 150.6 143 54.5
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 2.6e-34 149.8 142 52.8
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 7.7e-34 148.3 265 43.0
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 1.0e-30 137.9 123 57.7
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 1.1e-29 134.4 122 57.4
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 2.6e-29 133.3 124 56.5
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 2.8e-28 129.8 112 62.5
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 1.7e-25 120.6 139 45.3
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 3.8e-25 119.4 139 46.8
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 4.2e-24 115.9 150 43.3
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 1.6e-23 114.0 278 32.7
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 1.6e-23 114.0 83 62.7
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 2.7e-23 113.2 83 62.7
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 1.0e-22 111.3 152 40.1
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 2.3e-22 110.2 150 42.7
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 5.2e-22 109.0 111 54.1
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 1.3e-17 94.4 105 48.6
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 1.2e-15 87.8 86 58.1
HanXRQChr14g0430621 Helianthus annuus HOM05D044033 ORTHO05D225811 1.3e-09 67.8 34 94.1
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 8.6e-09 65.1 244 26.6
HanXRQChr12g0370281 Helianthus annuus HOM05D006805 ORTHO05D008656 1.0e-06 58.2 27 96.3


User provided reference genes

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