Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0255811 Helianthus annuus HOM05D000306 ORTHO05D007657 4.3e-115 417.9 199 100.0
HanXRQChr03g0068931 Helianthus annuus HOM05D000306 ORTHO05D007657 6.9e-65 251.1 125 96.8
ECA240G1428 Erigeron canadensis HOM05D000306 ORTHO05D005993 5.0e-63 245.0 125 94.4
Lsat_1_v5_gn_7_54281 Lactuca sativa HOM05D000306 ORTHO05D007657 1.6e-61 240.0 125 92.8
ECA240G0310 Erigeron canadensis HOM05D000306 ORTHO05D007657 3.9e-60 235.3 125 90.4
Hma1.2p1_1423F.1_g282590 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 2.2e-58 229.6 125 87.2
Hma1.2p1_3301F.1_g335020 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 2.2e-58 229.6 125 86.4
Dinv42746 Davidia involucrata HOM05D000306 ORTHO05D007657 1.8e-57 226.5 125 86.4
Dinv43355 Davidia involucrata HOM05D000306 ORTHO05D007657 1.8e-57 226.5 125 86.4
vmacro13107 Vaccinium macrocarpon HOM05D000306 ORTHO05D007657 4.1e-57 225.3 125 85.6
Cc06_g13490 Coffea canephora HOM05D000306 ORTHO05D007657 6.9e-57 224.6 125 83.2
Lj9A687T77 Lonicera japonica HOM05D000306 ORTHO05D007657 1.2e-56 223.8 125 84.8
Nitab4.5_0000244g0290 Nicotiana tabacum HOM05D000306 ORTHO05D007657 2.0e-56 223.0 125 83.2
Nitab4.5_0000937g0030 Nicotiana tabacum HOM05D000306 ORTHO05D007657 2.0e-56 223.0 125 83.2
CSS0004024 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D007657 3.4e-56 222.2 125 84.8
TWI34G1080 Tripterygium wilfordii HOM05D000306 ORTHO05D007657 3.4e-56 222.2 125 82.4
MBI16_g41815_MAGBIO Magnolia biondii HOM05D000306 ORTHO05D007657 4.5e-56 221.9 141 74.5
THA.LOC104803506 Tarenaya hassleriana HOM05D000306 ORTHO05D007657 5.9e-56 221.5 125 81.6
CAN.G584.11 Capsicum annuum HOM05D000306 ORTHO05D007657 7.7e-56 221.1 125 81.6
Peaxi162Scf00050g00633 Petunia axillaris HOM05D000306 ORTHO05D007657 7.7e-56 221.1 125 81.6
Solyc07g006780.3 Solanum lycopersicum HOM05D000306 ORTHO05D007657 7.7e-56 221.1 125 82.4
Sopen07g002880 Solanum pennellii HOM05D000306 ORTHO05D007657 7.7e-56 221.1 125 82.4
PGSC0003DMG400018753 Solanum tuberosum HOM05D000306 ORTHO05D007657 7.7e-56 221.1 125 82.4
CANSAT11G0744 Cannabis sativa HOM05D000306 ORTHO05D007657 1.0e-55 220.7 125 80.8
Atru.chr7.723 Acer truncatum HOM05D000306 ORTHO05D007657 1.3e-55 220.3 125 81.6
Gohir.A05G005700 Gossypium hirsutum HOM05D000306 ORTHO05D007657 1.3e-55 220.3 125 80.8
GSVIVG01029150001 Vitis vinifera HOM05D000306 ORTHO05D007657 1.3e-55 220.3 144 75.0
Gorai.009G006500 Gossypium raimondii HOM05D000306 ORTHO05D007657 1.7e-55 219.9 125 80.8
Potri.018G095700 Populus trichocarpa HOM05D000306 ORTHO05D007657 1.7e-55 219.9 125 81.6
Sabra18G0081600 Salix brachista HOM05D000306 ORTHO05D007657 1.7e-55 219.9 125 80.8
BcaNung00538 Brassica carinata HOM05D000306 ORTHO05D007657 2.9e-55 219.2 125 80.8
MELO3C004085.2 Cucumis melo HOM05D000306 ORTHO05D007657 2.9e-55 219.2 125 80.0
Rhsim01G0007000 Rhododendron simsii HOM05D000306 ORTHO05D007657 2.9e-55 219.2 125 82.4
TAR383G0632 Trochodendron aralioides HOM05D000306 ORTHO05D007657 2.9e-55 219.2 125 81.6
AL7G21840 Arabidopsis lyrata HOM05D000306 ORTHO05D007657 3.8e-55 218.8 125 81.6
Cpa.g.sc95.65 Carica papaya HOM05D000306 ORTHO05D007657 3.8e-55 218.8 125 81.6
Ciclev10007754m.g Citrus clementina HOM05D000306 ORTHO05D007657 3.8e-55 218.8 125 80.8
Gohir.D05G006400 Gossypium hirsutum HOM05D000306 ORTHO05D007657 5.0e-55 218.4 125 80.0
Nn2g14416 Nelumbo nucifera HOM05D000306 ORTHO05D007657 5.0e-55 218.4 142 73.2
Oeu042129.1 Olea europaea HOM05D000306 ORTHO05D007657 5.0e-55 218.4 125 80.0
QL02p097271 Quercus lobata HOM05D000306 ORTHO05D007657 5.0e-55 218.4 125 81.6
A03p59750 Brassica napus HOM05D000306 ORTHO05D007657 6.5e-55 218.0 125 80.0
C07p57810 Brassica napus HOM05D000306 ORTHO05D007657 6.5e-55 218.0 125 80.0
BolC7t46241H Brassica oleracea HOM05D000306 ORTHO05D007657 6.5e-55 218.0 125 80.0
Hund00645 Selenicereus undatus HOM05D000306 ORTHO05D007657 6.5e-55 218.0 131 76.3
Eucgr.C00188 Eucalyptus grandis HOM05D000306 ORTHO05D007657 1.4e-54 216.9 125 79.2
CsaV3_2G008000 Cucumis sativus L. HOM05D000306 ORTHO05D007657 1.9e-54 216.5 125 78.4
Thhalv10024769m.g Eutrema salsugineum HOM05D000306 ORTHO05D007657 1.9e-54 216.5 125 80.0
Carub.0007s1029 Capsella rubella HOM05D000306 ORTHO05D007657 2.5e-54 216.1 125 79.2
Nn2g12665 Nelumbo nucifera HOM05D000306 ORTHO05D007657 2.5e-54 216.1 125 80.8
Cfa013520 Carpinus fangiana HOM05D000306 ORTHO05D007657 3.2e-54 215.7 125 81.6
Sc14g0001220 Simmondsia chinensis HOM05D000306 ORTHO05D007657 3.2e-54 215.7 125 79.2
BraA03t15029Z Brassica rapa HOM05D000306 ORTHO05D007657 4.2e-54 215.3 125 79.2
Sp7g28180 Schrenkiella parvula HOM05D000306 ORTHO05D007657 4.2e-54 215.3 125 79.2
FAN12G4153 Fragaria x ananassa HOM05D000306 ORTHO05D007657 5.5e-54 214.9 125 80.0
AUR62039995 Chenopodium quinoa HOM05D000306 ORTHO05D007657 7.2e-54 214.5 125 78.4
AUR62040301 Chenopodium quinoa HOM05D000306 ORTHO05D007657 7.2e-54 214.5 125 78.4
Duzib150G0020 Durio zibethinus HOM05D000306 ORTHO05D007657 7.2e-54 214.5 125 80.0
FAN17G2452 Fragaria x ananassa HOM05D000306 ORTHO05D007657 7.2e-54 214.5 127 79.5
FAN22G1929 Fragaria x ananassa HOM05D000306 ORTHO05D007657 1.2e-53 213.8 125 79.2
Manes.06G026700 Manihot esculenta HOM05D000306 ORTHO05D007657 1.6e-53 213.4 125 82.4
SGA_v2.0_scaffold69G23280 Striga asiatica HOM05D000306 ORTHO05D007657 1.6e-53 213.4 125 77.6
Actinidia17107 Actinidia chinensis HOM05D000306 ORTHO05D007657 2.7e-53 212.6 125 80.0
FvH4_4g09080 Fragaria vesca HOM05D000306 ORTHO05D007657 2.7e-53 212.6 125 79.2
PGR142G2969 Punica granatum HOM05D000306 ORTHO05D007657 2.7e-53 212.6 125 78.4
CiPaw.07G190000 Carya illinoinensis HOM05D000306 ORTHO05D007657 3.6e-53 212.2 125 80.0
RcHm_v2.0_Chr4g0403081 Rosa chinensis HOM05D000306 ORTHO05D007657 3.6e-53 212.2 125 78.4
Migut.J01462 Erythranthe guttata HOM05D000306 ORTHO05D007657 4.7e-53 211.8 125 76.8
Hund00646 Selenicereus undatus HOM05D000306 ORTHO05D007657 7.9e-53 211.1 131 74.0
Aa31LG2G20220 Aethionema arabicum HOM05D000306 ORTHO05D007657 1.4e-52 210.3 125 78.4
PSO063G6265 Papaver somniferum HOM05D000306 ORTHO05D007657 1.4e-52 210.3 125 78.4
Prupe.1G089400 Prunus persica HOM05D000306 ORTHO05D007657 3.0e-52 209.1 125 79.2
Aqoxy7G03118 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 5.2e-52 208.4 125 79.2
Lalb_Chr07g0180291 Lupinus albus HOM05D000306 ORTHO05D007657 5.2e-52 208.4 125 79.2
PSO782G2546 Papaver somniferum HOM05D000306 ORTHO05D007657 5.2e-52 208.4 125 77.6
Zm00001eb069070 Zea mays HOM05D000306 ORTHO05D007657 8.8e-52 207.6 125 78.4
Glyma.17G065600 Glycine max HOM05D000306 ORTHO05D007657 2.0e-51 206.5 125 77.6
Glyma.13G094600 Glycine max HOM05D000306 ORTHO05D007657 2.6e-51 206.1 125 76.0
CDE04G1293 Ceratophyllum demersum HOM05D000306 ORTHO05D007657 7.4e-51 204.5 125 76.0
SHI02941 Sapria himalayana HOM05D000306 ORTHO05D007657 9.7e-51 204.1 149 65.8
HPP92_013461 Vanilla planifolia HOM05D000306 ORTHO05D007657 2.8e-50 202.6 125 74.4
EL10Ac8g18267 Beta vulgaris HOM05D000306 ORTHO05D007657 4.8e-50 201.8 125 73.6
Phvul.003G148000 Phaseolus vulgaris HOM05D000306 ORTHO05D007657 6.3e-50 201.4 125 76.8
ATR0580G308 Amborella trichopoda HOM05D000306 ORTHO05D007657 8.2e-50 201.1 125 75.2
Sed0007717 Sechium edule HOM05D000306 ORTHO05D007657 1.1e-49 200.7 125 75.2
MD13G1267100 Malus domestica HOM05D000306 ORTHO05D007657 1.8e-49 199.9 125 76.8
Psat4g012000 Pisum sativum HOM05D000306 ORTHO05D007657 1.8e-49 199.9 125 76.8
Ca_21206_v3 Cicer arietinum L. HOM05D000306 ORTHO05D007657 2.4e-49 199.5 125 76.8
ClCG11G012530 Citrullus lanatus HOM05D000306 ORTHO05D007657 4.1e-49 198.7 161 61.5
SEGI_25583 Sequoiadendron giganteum HOM05D000306 ORTHO05D007657 4.1e-49 198.7 138 66.7
Lj4g0000904 Lotus japonicus HOM05D000306 ORTHO05D007657 7.0e-49 198.0 125 76.8
Medtr4g128640 Medicago truncatula HOM05D000306 ORTHO05D007657 4.5e-48 195.3 125 75.2
VMungo1215G2115 Vigna mungo HOM05D000306 ORTHO05D007657 4.5e-48 195.3 125 75.2
Mapoly0003s0282 Marchantia polymorpha HOM05D000306 ORTHO05D007657 3.8e-47 192.2 125 68.8
arahy.Tifrunner.gnm1.ann1.2QW3Q9 Arachis hypogaea HOM05D000306 ORTHO05D007657 9.4e-46 187.6 128 72.7
Haze_22120 Corylus avellana HOM05D000306 ORTHO05D007657 9.4e-46 187.6 125 72.8
arahy.Tifrunner.gnm1.ann1.ID2I7H Arachis hypogaea HOM05D000306 ORTHO05D007657 8.0e-45 184.5 125 72.0
Pp3c23_15560 Physcomitrium patens HOM05D000306 ORTHO05D007657 2.7e-40 169.5 125 64.8
RcHm_v2.0_Chr4g0405011 Rosa chinensis HOM05D000306 ORTHO05D007657 3.2e-38 162.5 125 61.6
TPR.G5313 Trifolium pratense HOM05D000306 ORTHO05D007657 6.8e-36 154.8 100 74.0
Haze_26997 Corylus avellana HOM05D000306 ORTHO05D007657 1.0e-31 141.0 126 54.8
Hma1.2p1_0342F.1_g130620 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 2.3e-28 129.8 106 66.0
Aqoxy3G01525 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 1.2e-21 107.5 60 78.3
CAN.G790.37 Capsicum annuum HOM05D000306 ORTHO05D007657 5.2e-20 102.1 54 81.5
Cfa026537 Carpinus fangiana HOM05D000306 ORTHO05D007657 8.3e-18 94.7 135 36.3
DCAR_020114 Daucus carota HOM05D000306 ORTHO05D007657 4.6e-16 89.0 57 71.9
arahy.Tifrunner.gnm1.ann1.QZT5UT Arachis hypogaea HOM05D000200 ORTHO05D010534 1.4e-12 77.4 88 51.1
AT4G30310 Arabidopsis thaliana HOM05D000306 ORTHO05D007657 2.0e-11 73.6 35 88.6
Thecc.09G168500 Theobroma cacao HOM05D000306 ORTHO05D007657 7.5e-11 71.6 35 88.6
AagrBONN_evm.TU.Sc2ySwM_117.626 Anthoceros agrestis HOM05D000306 ORTHO05D007657 2.3e-07 60.1 35 71.4
Cre12.g543902 Chlamydomonas reinhardtii HOM05D000306 ORTHO05D007657 2.3e-07 60.1 134 29.1
SMO239G0169 Selaginella moellendorffii HOM05D000306 ORTHO05D007657 3.0e-07 59.7 35 71.4
HanXRQChr03g0091791 Helianthus annuus HOM05D005134 ORTHO05D006548 6.6e-07 58.5 26 100.0


User provided reference genes

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