Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0255201 Helianthus annuus HOM05D007622 ORTHO05D009409 1.6e-58 229.2 110 100.0
Lsat_1_v5_gn_4_184040 Lactuca sativa HOM05D007622 ORTHO05D009409 7.3e-48 193.7 97 91.8
GSVIVG01032401001 Vitis vinifera HOM05D007622 ORTHO05D009409 7.5e-45 183.7 112 79.5
ECA232G2324 Erigeron canadensis HOM05D007622 ORTHO05D009409 1.3e-44 183.0 96 90.6
SGA_v2.0_scaffold195G40817 Striga asiatica HOM05D007622 ORTHO05D009409 1.7e-44 182.6 113 78.8
Oeu013968.1 Olea europaea HOM05D007622 ORTHO05D009409 2.2e-44 182.2 112 78.6
MSTRG.15530 Avicennia marina HOM05D007622 ORTHO05D009409 2.9e-44 181.8 112 78.6
Duzib147G0488 Durio zibethinus HOM05D007622 ORTHO05D009409 2.9e-44 181.8 114 76.3
SalBow1G5210 Salvia bowleyana HOM05D007622 ORTHO05D009409 2.9e-44 181.8 112 77.7
Dinv35108 Davidia involucrata HOM05D007622 ORTHO05D009409 6.4e-44 180.6 95 87.4
Nitab4.5_0003318g0060 Nicotiana tabacum HOM05D007622 ORTHO05D009409 1.1e-43 179.9 113 79.6
QL02p074426 Quercus lobata HOM05D007622 ORTHO05D009409 1.1e-43 179.9 94 87.2
Sc03g0007350 Simmondsia chinensis HOM05D007622 ORTHO05D009409 1.8e-43 179.1 106 79.2
CiPaw.04G028800 Carya illinoinensis HOM05D007622 ORTHO05D009409 2.4e-43 178.7 115 76.5
Potri.017G071300 Populus trichocarpa HOM05D007622 ORTHO05D009409 3.2e-43 178.3 113 76.1
TWI36G0684 Tripterygium wilfordii HOM05D007622 ORTHO05D009409 3.2e-43 178.3 113 77.9
Ah.03g137040 Amaranthus hybridus HOM05D007622 ORTHO05D009409 4.1e-43 177.9 110 76.4
Potri.001G344700 Populus trichocarpa HOM05D007622 ORTHO05D009409 4.1e-43 177.9 113 77.9
Peaxi162Scf00129g01661 Petunia axillaris HOM05D007622 ORTHO05D009409 5.4e-43 177.6 113 78.8
CAN.G473.12 Capsicum annuum HOM05D007622 ORTHO05D009409 9.2e-43 176.8 113 79.6
DCAR_001440 Daucus carota HOM05D007622 ORTHO05D009409 9.2e-43 176.8 112 76.8
PGSC0003DMG400012602 Solanum tuberosum HOM05D007622 ORTHO05D009409 9.2e-43 176.8 113 77.9
Nitab4.5_0001860g0100 Nicotiana tabacum HOM05D007622 ORTHO05D009409 1.6e-42 176.0 113 77.0
Sabra16G0223800 Salix brachista HOM05D007622 ORTHO05D009409 1.6e-42 176.0 113 76.1
CANSAT64G0926 Cannabis sativa HOM05D007622 ORTHO05D009409 2.0e-42 175.6 95 85.3
Prupe.3G292200 Prunus persica HOM05D007622 ORTHO05D009409 2.0e-42 175.6 99 82.8
Solyc02g093350.3 Solanum lycopersicum HOM05D007622 ORTHO05D009409 2.0e-42 175.6 113 77.0
Actinidia16945 Actinidia chinensis HOM05D007622 ORTHO05D009409 3.5e-42 174.9 114 74.6
COL.COLO4_29125 Corchorus olitorius HOM05D000285 ORTHO05D009409 4.6e-42 174.5 97 84.5
Eucgr.J02247 Eucalyptus grandis HOM05D007622 ORTHO05D009409 4.6e-42 174.5 99 81.8
Aqoxy5G03768 Aquilegia oxysepala HOM05D007622 ORTHO05D009409 7.8e-42 173.7 113 73.5
Gohir.D07G230100 Gossypium hirsutum HOM05D007622 ORTHO05D009409 7.8e-42 173.7 114 71.9
Gorai.001G265400 Gossypium raimondii HOM05D007622 ORTHO05D009409 7.8e-42 173.7 114 71.9
Sopen02g037920 Solanum pennellii HOM05D007622 ORTHO05D009409 7.8e-42 173.7 113 76.1
Thecc.04G017800 Theobroma cacao HOM05D007622 ORTHO05D009409 7.8e-42 173.7 114 74.6
CSS0000151 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 1.0e-41 173.3 122 71.3
CSS0044104 Camellia sinensis var. sinensis HOM05D007622 ORTHO05D009409 1.0e-41 173.3 122 71.3
PGR083G1671 Punica granatum HOM05D007622 ORTHO05D009409 1.0e-41 173.3 115 73.9
Cc07_g01640 Coffea canephora HOM05D007622 ORTHO05D009409 1.3e-41 172.9 111 73.0
Gohir.A07G223400 Gossypium hirsutum HOM05D007622 ORTHO05D009409 2.3e-41 172.2 114 70.2
MD17G1026500 Malus domestica HOM05D007622 ORTHO05D009409 2.3e-41 172.2 113 75.2
Nn4g22626 Nelumbo nucifera HOM05D007622 ORTHO05D009409 3.0e-41 171.8 110 73.6
ClCG09G019280 Citrullus lanatus HOM05D007622 ORTHO05D009409 6.6e-41 170.6 115 75.7
Ciclev10017228m.g Citrus clementina HOM05D007622 ORTHO05D009409 8.6e-41 170.2 116 74.1
FvH4_6g51480 Fragaria vesca HOM05D007622 ORTHO05D009409 1.9e-40 169.1 99 78.8
FAN02G2753 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.9e-40 169.1 99 78.8
FAN09G4241 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.9e-40 169.1 99 78.8
FAN14G0072 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.9e-40 169.1 99 78.8
EL10Ac6g14084 Beta vulgaris HOM05D007622 ORTHO05D009409 2.5e-40 168.7 105 77.1
RcHm_v2.0_Chr2g0173121 Rosa chinensis HOM05D007622 ORTHO05D009409 3.3e-40 168.3 99 76.8
CDE02G3805 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 4.3e-40 167.9 115 69.6
MELO3C021583.2 Cucumis melo HOM05D007622 ORTHO05D009409 5.6e-40 167.5 116 75.0
CDE09G0341 Ceratophyllum demersum HOM05D007622 ORTHO05D009409 7.3e-40 167.2 115 68.7
CsaV3_5G027110 Cucumis sativus L. HOM05D007622 ORTHO05D009409 7.3e-40 167.2 95 84.2
PSO111G0004 Papaver somniferum HOM05D007622 ORTHO05D009409 7.3e-40 167.2 112 72.3
Manes.15G151000 Manihot esculenta HOM05D007622 ORTHO05D009409 9.5e-40 166.8 113 77.0
Hund12976 Selenicereus undatus HOM05D007622 ORTHO05D009409 1.2e-39 166.4 112 73.2
THA.LOC104805368 Tarenaya hassleriana HOM05D007622 ORTHO05D009409 1.2e-39 166.4 115 70.4
FAN05G3531 Fragaria x ananassa HOM05D007622 ORTHO05D009409 1.6e-39 166.0 95 80.0
Sp7g01380 Schrenkiella parvula HOM05D007622 ORTHO05D009409 2.1e-39 165.6 112 72.3
Atru.chr6.2402 Acer truncatum HOM05D007622 ORTHO05D009409 2.8e-39 165.2 112 76.8
Sed0017852 Sechium edule HOM05D007622 ORTHO05D009409 4.7e-39 164.5 99 78.8
AT5G40500 Arabidopsis thaliana HOM05D007622 ORTHO05D009409 8.0e-39 163.7 111 73.0
Thhalv10027995m.g Eutrema salsugineum HOM05D007622 ORTHO05D009409 8.0e-39 163.7 100 76.0
arahy.Tifrunner.gnm1.ann1.QKG8XN Arachis hypogaea HOM05D007622 ORTHO05D009409 1.4e-38 162.9 119 68.9
TAR629G2574 Trochodendron aralioides HOM05D007622 ORTHO05D009409 1.4e-38 162.9 95 83.2
Zm00001eb425130 Zea mays HOM05D007622 ORTHO05D009409 1.4e-38 162.9 102 73.5
Lalb_Chr24g0402871 Lupinus albus HOM05D007622 ORTHO05D009409 1.8e-38 162.5 95 78.9
AL7G49320 Arabidopsis lyrata HOM05D007622 ORTHO05D009409 5.2e-38 161.0 97 80.4
BcaB06g27524 Brassica carinata HOM05D007622 ORTHO05D009409 5.2e-38 161.0 101 75.2
A04p13550 Brassica napus HOM05D000285 ORTHO05D009409 5.2e-38 161.0 101 75.2
C04p47330 Brassica napus HOM05D000285 ORTHO05D009409 5.2e-38 161.0 101 75.2
BolC4t26334H Brassica oleracea HOM05D000285 ORTHO05D009409 5.2e-38 161.0 101 75.2
BraA04t17014Z Brassica rapa HOM05D000285 ORTHO05D009409 5.2e-38 161.0 101 75.2
Duzib264G0071 Durio zibethinus HOM05D007622 ORTHO05D009409 5.2e-38 161.0 109 72.5
Migut.H00074 Erythranthe guttata HOM05D007622 ORTHO05D009409 6.8e-38 160.6 108 74.1
Carub.0007s3502 Capsella rubella HOM05D007622 ORTHO05D009409 4.4e-37 157.9 113 69.9
Phvul.008G153900 Phaseolus vulgaris HOM05D007622 ORTHO05D009409 7.5e-37 157.1 94 76.6
Glyma.16G070800 Glycine max HOM05D007622 ORTHO05D009409 9.8e-37 156.8 112 67.0
Glyma.19G060600 Glycine max HOM05D007622 ORTHO05D009409 9.8e-37 156.8 94 76.6
PSO067G0063 Papaver somniferum HOM05D007622 ORTHO05D009409 1.7e-36 156.0 118 68.6
Medtr7g033680 Medicago truncatula HOM05D007622 ORTHO05D009409 1.9e-35 152.5 92 76.1
Os04g0482900 Oryza sativa ssp. japonica HOM05D007622 ORTHO05D009409 5.4e-35 151.0 82 80.5
arahy.Tifrunner.gnm1.ann1.30MLP8 Arachis hypogaea HOM05D007622 ORTHO05D009409 1.2e-34 149.8 129 62.8
Lj1g0022477 Lotus japonicus HOM05D007622 ORTHO05D009409 1.6e-34 149.4 82 81.7
TPR.G1098 Trifolium pratense HOM05D007622 ORTHO05D009409 3.9e-33 144.8 81 81.5
SEGI_15693 Sequoiadendron giganteum HOM05D007622 ORTHO05D009409 8.1e-31 137.1 95 67.4
AagrBONN_evm.TU.Sc2ySwM_117.2472 Anthoceros agrestis HOM05D007622 ORTHO05D009409 2.6e-29 132.1 96 59.4
vmacro18290 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 7.5e-29 130.6 99 68.7
Pp3c12_19400 Physcomitrium patens HOM05D007622 ORTHO05D009409 4.9e-28 127.9 99 59.6
Aa31LG9G1100 Aethionema arabicum HOM05D001812 ORTHO05D001874 2.4e-27 125.6 75 77.3
Rhsim08G0048800 Rhododendron simsii HOM05D007622 ORTHO05D009409 4.6e-26 121.3 83 73.5
SMO367G1081 Selaginella moellendorffii HOM05D007622 ORTHO05D009409 1.7e-25 119.4 93 51.6
TAR371G1070 Trochodendron aralioides HOM05D007622 ORTHO05D009409 9.5e-24 113.6 65 76.9
CBR_g34193 Chara braunii HOM05D007622 ORTHO05D009409 2.1e-23 112.5 96 52.1
MD09G1025400 Malus domestica HOM05D007622 ORTHO05D009409 1.1e-22 110.2 60 86.7
Psat3g166480 Pisum sativum HOM05D007622 ORTHO05D009409 5.2e-22 107.8 64 79.7
Cre12.g498700 Chlamydomonas reinhardtii HOM05D007622 ORTHO05D009409 5.6e-16 87.8 76 50.0
PRCOL_00004665 Prasinoderma coloniale HOM05D007622 ORTHO05D009409 1.9e-11 72.8 92 31.5
vmacro18289 Vaccinium macrocarpon HOM05D007622 ORTHO05D009409 3.5e-10 68.6 48 62.5


User provided reference genes

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