Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0255191 Helianthus annuus HOM05D003867 ORTHO05D004593 1.1e-292 1009.2 493 100.0
ECA232G3717 Erigeron canadensis HOM05D003867 ORTHO05D004593 4.9e-277 957.2 477 97.1
Lsat_1_v5_gn_4_184020 Lactuca sativa HOM05D003867 ORTHO05D004593 6.1e-272 940.3 479 95.6
HanXRQChr15g0486841 Helianthus annuus HOM05D003867 ORTHO05D004593 5.2e-271 937.2 480 95.4
Migut.E00031 Erythranthe guttata HOM05D003867 ORTHO05D004593 4.4e-270 934.1 484 93.4
MD13G1115400 Malus domestica HOM05D003867 ORTHO05D004593 2.2e-269 931.8 480 94.4
Prupe.1G231900 Prunus persica HOM05D003867 ORTHO05D004593 2.2e-269 931.8 480 94.4
COL.COLO4_12823 Corchorus olitorius HOM05D003867 ORTHO05D004593 2.9e-269 931.4 480 92.7
FvH4_4g24110 Fragaria vesca HOM05D003867 ORTHO05D004593 3.7e-269 931.0 480 94.2
DCAR_007011 Daucus carota HOM05D003867 ORTHO05D004593 8.3e-269 929.9 484 92.8
RcHm_v2.0_Chr4g0430891 Rosa chinensis HOM05D003867 ORTHO05D004593 8.3e-269 929.9 480 94.2
DCAR_031187 Daucus carota HOM05D003867 ORTHO05D004593 1.4e-268 929.1 483 93.6
Gohir.A12G147700 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.2e-267 926.0 480 91.9
CSS0021164 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 2.0e-267 925.2 480 92.3
Gohir.D12G152000 Gossypium hirsutum HOM05D003867 ORTHO05D004593 2.0e-267 925.2 480 92.7
Gorai.008G164400 Gossypium raimondii HOM05D003867 ORTHO05D004593 2.0e-267 925.2 479 93.1
Thecc.02G275800 Theobroma cacao HOM05D003867 ORTHO05D004593 2.0e-267 925.2 480 92.7
Peaxi162Scf00128g01017 Petunia axillaris HOM05D003867 ORTHO05D004593 2.7e-267 924.9 483 92.8
MD16G1115300 Malus domestica HOM05D003867 ORTHO05D004593 3.5e-267 924.5 480 94.2
Gorai.001G109800 Gossypium raimondii HOM05D003867 ORTHO05D004593 4.6e-267 924.1 480 92.5
Duzib268G1394 Durio zibethinus HOM05D003867 ORTHO05D004593 1.3e-266 922.5 480 92.7
Gohir.D07G101900 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.1e-265 919.5 480 92.1
Duzib251G0884 Durio zibethinus HOM05D003867 ORTHO05D004593 3.3e-265 917.9 480 92.1
Duzib248G0225 Durio zibethinus HOM05D003867 ORTHO05D004593 7.3e-265 916.8 480 92.1
Ca_12000_v3 Cicer arietinum L. HOM05D003867 ORTHO05D004593 1.2e-264 916.0 477 92.0
Gohir.A07G097600 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.2e-264 916.0 480 91.0
Medtr1g042300 Medicago truncatula HOM05D003867 ORTHO05D004593 1.2e-264 916.0 477 92.0
Nitab4.5_0000271g0190 Nicotiana tabacum HOM05D003867 ORTHO05D004593 1.2e-264 916.0 483 91.3
Haze_12379 Corylus avellana HOM05D003867 ORTHO05D004593 2.1e-264 915.2 479 92.5
CANSAT64G1093 Cannabis sativa HOM05D003867 ORTHO05D004593 2.8e-264 914.8 477 92.2
Lalb_Chr03g0037281 Lupinus albus HOM05D003867 ORTHO05D004593 2.8e-264 914.8 477 91.8
Solyc02g087240.4 Solanum lycopersicum HOM05D003867 ORTHO05D004593 2.8e-264 914.8 484 91.5
Sopen02g031980 Solanum pennellii HOM05D003867 ORTHO05D004593 2.8e-264 914.8 484 91.5
TPR.G25178 Trifolium pratense HOM05D003867 ORTHO05D004593 2.8e-264 914.8 477 91.8
Hund25446 Selenicereus undatus HOM05D003867 ORTHO05D004593 3.6e-264 914.4 479 91.4
PGSC0003DMG400001292 Solanum tuberosum HOM05D003867 ORTHO05D004593 4.7e-264 914.1 484 91.3
vmacro15114 Vaccinium macrocarpon HOM05D003867 ORTHO05D004593 6.2e-264 913.7 480 90.8
EL10Ac6g13463 Beta vulgaris HOM05D003867 ORTHO05D004593 1.4e-263 912.5 480 92.1
CSS0008021 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 1.4e-263 912.5 480 90.8
Oeu020305.1 Olea europaea HOM05D003867 ORTHO05D004593 1.4e-263 912.5 484 91.1
arahy.Tifrunner.gnm1.ann1.VZW0IR Arachis hypogaea HOM05D003867 ORTHO05D004593 2.3e-263 911.8 479 91.4
Rhsim12G0153900 Rhododendron simsii HOM05D003867 ORTHO05D004593 2.3e-263 911.8 480 90.6
Cpa.g.sc257.6 Carica papaya HOM05D003867 ORTHO05D004593 4.0e-263 911.0 480 91.5
CiPaw.05G113400 Carya illinoinensis HOM05D003867 ORTHO05D004593 4.0e-263 911.0 480 91.2
TWI36G0688 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 4.0e-263 911.0 480 91.7
MSTRG.7988 Avicennia marina HOM05D003867 ORTHO05D004593 8.9e-263 909.8 480 92.1
MELO3C009702.2 Cucumis melo HOM05D003867 ORTHO05D004593 2.0e-262 908.7 480 91.2
Thhalv10013394m.g Eutrema salsugineum HOM05D003867 ORTHO05D004593 2.0e-262 908.7 480 91.5
Lalb_Chr01g0021001 Lupinus albus HOM05D003867 ORTHO05D004593 2.0e-262 908.7 477 91.4
CsaV3_3G039600 Cucumis sativus L. HOM05D003867 ORTHO05D004593 3.4e-262 907.9 480 91.2
Manes.12G014300 Manihot esculenta HOM05D003867 ORTHO05D004593 3.4e-262 907.9 480 90.4
A10p28200 Brassica napus HOM05D003867 ORTHO05D004593 4.4e-262 907.5 480 91.5
Nn4g22382 Nelumbo nucifera HOM05D003867 ORTHO05D004593 4.4e-262 907.5 480 91.5
A03p03890 Brassica napus HOM05D003867 ORTHO05D004593 5.8e-262 907.1 481 91.5
CARHR204460 Cardamine hirsuta HOM05D003867 ORTHO05D004593 5.8e-262 907.1 480 91.5
Carub.0006s0748 Capsella rubella HOM05D003867 ORTHO05D004593 7.5e-262 906.7 480 91.2
Psat6g040120 Pisum sativum HOM05D003867 ORTHO05D004593 7.5e-262 906.7 477 91.0
AT5G08530 Arabidopsis thaliana HOM05D003867 ORTHO05D004593 9.8e-262 906.4 480 91.2
Sed0026140 Sechium edule HOM05D003867 ORTHO05D004593 9.8e-262 906.4 480 90.8
SGA_v2.0_scaffold63G21760 Striga asiatica HOM05D003867 ORTHO05D004593 9.8e-262 906.4 480 91.5
BraA10t44869Z Brassica rapa HOM05D003867 ORTHO05D004593 1.3e-261 906.0 479 91.4
Peaxi162Scf00449g00825 Petunia axillaris HOM05D003867 ORTHO05D004593 1.3e-261 906.0 478 91.4
Potri.010G057400 Populus trichocarpa HOM05D003867 ORTHO05D004593 1.7e-261 905.6 480 90.6
Sp6g34370 Schrenkiella parvula HOM05D003867 ORTHO05D004593 1.7e-261 905.6 480 91.5
Aa31LG3G18010 Aethionema arabicum HOM05D003867 ORTHO05D004593 2.2e-261 905.2 480 90.6
SGA_v2.0_scaffold347G49568 Striga asiatica HOM05D003867 ORTHO05D004593 2.2e-261 905.2 480 91.2
Hund06074 Selenicereus undatus HOM05D003867 ORTHO05D004593 2.9e-261 904.8 481 90.6
AL6G19230 Arabidopsis lyrata HOM05D003867 ORTHO05D004593 3.7e-261 904.4 480 91.2
MBI11_g06772_MAGBIO Magnolia biondii HOM05D003867 ORTHO05D004593 3.7e-261 904.4 480 90.6
QL03p054504 Quercus lobata HOM05D003867 ORTHO05D004593 3.7e-261 904.4 480 91.0
BolC9t59588H Brassica oleracea HOM05D003867 ORTHO05D004593 4.9e-261 904.0 479 91.2
TAR374G1237 Trochodendron aralioides HOM05D003867 ORTHO05D004593 6.4e-261 903.7 480 90.6
Lj6g0022289 Lotus japonicus HOM05D003867 ORTHO05D004593 8.3e-261 903.3 477 91.6
C03p04400 Brassica napus HOM05D003867 ORTHO05D004593 1.1e-260 902.9 480 91.2
Sabra10G0047900 Salix brachista HOM05D003867 ORTHO05D004593 1.9e-260 902.1 479 90.6
TWI75G1178 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 1.9e-260 902.1 480 89.6
BcaB01g05588 Brassica carinata HOM05D003867 ORTHO05D004593 2.4e-260 901.7 480 90.8
BcaB08g37249 Brassica carinata HOM05D003867 ORTHO05D004593 2.4e-260 901.7 480 91.2
CAN.G206.61 Capsicum annuum HOM05D003867 ORTHO05D004593 2.4e-260 901.7 479 91.0
CDE09G0709 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 3.2e-260 901.4 480 90.2
THA.LOC104819362 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 3.2e-260 901.4 480 91.0
Ah.03g133960 Amaranthus hybridus HOM05D003867 ORTHO05D004593 4.1e-260 901.0 478 91.0
Nn3g16522 Nelumbo nucifera HOM05D003867 ORTHO05D004593 5.4e-260 900.6 480 90.2
Aqoxy3G01483 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 1.2e-259 899.4 480 91.0
C09p68410 Brassica napus HOM05D003867 ORTHO05D004593 1.2e-259 899.4 482 90.9
VMungo0720G1468 Vigna mungo HOM05D003867 ORTHO05D004593 1.6e-259 899.0 486 90.3
ClCG02G006860 Citrullus lanatus HOM05D003867 ORTHO05D004593 2.7e-259 898.3 480 90.4
Glyma.10G005500 Glycine max HOM05D003867 ORTHO05D004593 2.7e-259 898.3 477 90.1
PSO063G4816 Papaver somniferum HOM05D003867 ORTHO05D004593 2.7e-259 898.3 481 90.6
PGR119G1061 Punica granatum HOM05D003867 ORTHO05D004593 3.5e-259 897.9 485 90.1
BolC3t12971H Brassica oleracea HOM05D003867 ORTHO05D004593 4.6e-259 897.5 477 91.2
Oeu019042.1 Olea europaea HOM05D003867 ORTHO05D004593 4.6e-259 897.5 480 91.0
Rhsim12G0103900 Rhododendron simsii HOM05D003867 ORTHO05D004593 7.8e-259 896.7 467 91.6
BraA03t09737Z Brassica rapa HOM05D003867 ORTHO05D004593 1.3e-258 896.0 478 90.8
Glyma.02G003300 Glycine max HOM05D003867 ORTHO05D004593 1.3e-258 896.0 477 89.9
PSO782G1516 Papaver somniferum HOM05D003867 ORTHO05D004593 3.9e-258 894.4 481 90.2
Phvul.007G274700 Phaseolus vulgaris HOM05D003867 ORTHO05D004593 6.6e-258 893.6 477 90.8
THA.LOC104818400 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 1.5e-257 892.5 480 90.6
Sc04g0010000 Simmondsia chinensis HOM05D003867 ORTHO05D004593 3.3e-257 891.3 479 89.8
Eucgr.H04659 Eucalyptus grandis HOM05D003867 ORTHO05D004593 1.2e-256 889.4 480 89.6
ATR0564G372 Amborella trichopoda HOM05D003867 ORTHO05D004593 1.8e-255 885.6 477 89.9
ATR0665G595 Amborella trichopoda HOM05D003867 ORTHO05D004593 1.8e-255 885.6 477 89.7
Cc11_g16710 Coffea canephora HOM05D003867 ORTHO05D004593 1.5e-254 882.5 460 92.2
Zm00001eb110430 Zea mays HOM05D003867 ORTHO05D004593 2.0e-254 882.1 454 93.8
Zm00001eb329270 Zea mays HOM05D003867 ORTHO05D004593 3.4e-254 881.3 481 90.4
Os07g0645400 Oryza sativa ssp. japonica HOM05D003867 ORTHO05D004593 7.5e-254 880.2 451 93.8
Ciclev10033600m.g Citrus clementina HOM05D003867 ORTHO05D004593 8.3e-253 876.7 446 93.5
SMO141G0212 Selaginella moellendorffii HOM05D003867 ORTHO05D004593 4.7e-248 860.9 452 91.2
SEGI_02035 Sequoiadendron giganteum HOM05D003867 ORTHO05D004593 1.5e-246 855.9 482 86.7
Pp3c12_4050 Physcomitrium patens HOM05D003867 ORTHO05D004593 4.4e-246 854.4 482 86.9
AagrBONN_evm.TU.Sc2ySwM_117.2067 Anthoceros agrestis HOM05D003867 ORTHO05D004593 1.2e-243 846.3 477 84.3
HanXRQChr15g0475281 Helianthus annuus HOM05D003867 ORTHO05D004593 4.6e-243 844.3 477 83.6
Pp3c4_17990 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.7e-242 842.4 430 92.1
Lsat_1_v5_gn_0_47760 Lactuca sativa HOM05D003867 ORTHO05D004593 2.1e-240 835.5 456 86.6
Mapoly0052s0094 Marchantia polymorpha HOM05D003867 ORTHO05D004593 4.7e-240 834.3 431 90.5
CBR_g4558 Chara braunii HOM05D003867 ORTHO05D004593 2.2e-237 825.5 434 88.7
arahy.Tifrunner.gnm1.ann1.IM3BGM Arachis hypogaea HOM05D003867 ORTHO05D004593 2.3e-234 815.5 401 95.0
CiPaw.06G100100 Carya illinoinensis HOM05D003867 ORTHO05D004593 2.5e-233 812.0 401 94.8
unitig_21.g20878 Utricularia gibba HOM05D003867 ORTHO05D004593 5.6e-233 810.8 401 95.0
AUR62024144 Chenopodium quinoa HOM05D003867 ORTHO05D004593 7.3e-233 810.4 402 94.5
AUR62005586 Chenopodium quinoa HOM05D003867 ORTHO05D004593 2.8e-232 808.5 401 94.5
MCO16G634 Micromonas commoda HOM05D003867 ORTHO05D004593 7.1e-228 793.9 433 85.5
CDE02G4050 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 4.3e-225 784.6 480 80.8
Dinv37748 Davidia involucrata HOM05D003867 ORTHO05D004593 3.5e-219 765.0 378 95.8
PRCOL_00003927 Prasinoderma coloniale HOM05D003867 ORTHO05D004593 1.0e-218 763.5 427 82.9
CBR_g30767 Chara braunii HOM05D003867 ORTHO05D004593 3.0e-218 761.9 426 82.4
Cre10.g422600 Chlamydomonas reinhardtii HOM05D003867 ORTHO05D004593 9.6e-217 756.9 433 81.3
Dinv39063 Davidia involucrata HOM05D003867 ORTHO05D004593 6.5e-213 744.2 392 89.8
Actinidia08082 Actinidia chinensis HOM05D003867 ORTHO05D004593 4.3e-209 731.5 393 89.3
Sed0024813 Sechium edule HOM05D003867 ORTHO05D004593 2.5e-204 715.7 474 76.2
SGA_v2.0_scaffold1484G53963 Striga asiatica HOM05D003867 ORTHO05D004593 5.1e-194 681.4 369 89.7
Nn7g37842 Nelumbo nucifera HOM05D003867 ORTHO05D004593 4.2e-188 661.8 346 91.0
FAN17G1814 Fragaria x ananassa HOM05D003867 ORTHO05D004593 4.4e-185 651.7 480 71.0
Haze_26697 Corylus avellana HOM05D003867 ORTHO05D004593 4.5e-182 641.7 395 74.4
FAN12G0392 Fragaria x ananassa HOM05D003867 ORTHO05D004593 8.2e-176 620.9 480 68.8
FAN22G0799 Fragaria x ananassa HOM05D003867 ORTHO05D004593 3.1e-175 619.0 480 68.5
HPP92_000985 Vanilla planifolia HOM05D003867 ORTHO05D004593 1.6e-174 616.7 309 93.9
FAN07G1251 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.3e-173 613.6 480 68.3
unitig_744.g24299 Utricularia gibba HOM05D003867 ORTHO05D004593 2.2e-168 596.3 331 87.9
Nn3g20865 Nelumbo nucifera HOM05D003867 ORTHO05D004593 2.0e-145 520.0 279 88.5
Actinidia20690 Actinidia chinensis HOM05D003867 ORTHO05D004593 3.6e-139 499.2 351 72.1
Haze_26928 Corylus avellana HOM05D003867 ORTHO05D004593 3.0e-125 453.0 284 74.6
TAR629G2520 Trochodendron aralioides HOM05D003867 ORTHO05D004593 1.8e-114 417.2 203 96.6
Aqoxy3G01811 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 1.2e-97 361.3 180 92.2
Actinidia09668 Actinidia chinensis HOM05D003867 ORTHO05D004593 1.2e-94 351.3 222 77.0
TAR629G2231 Trochodendron aralioides HOM05D003867 ORTHO05D004593 3.1e-90 336.7 166 95.2
CSS0023173 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 1.1e-87 328.2 164 93.3
Nitab4.5_0000581g0020 Nicotiana tabacum HOM05D003867 ORTHO05D004593 3.2e-87 326.6 479 43.2
Atru.chr11.2286 Acer truncatum HOM05D003867 ORTHO05D004593 9.1e-74 282.0 146 89.7
Lj6P823T18 Lonicera japonica HOM05D003867 ORTHO05D004593 1.1e-68 265.0 146 87.0
HPP92_000984 Vanilla planifolia HOM05D003867 ORTHO05D004593 2.8e-67 260.4 164 81.1
MD16G1114900 Malus domestica HOM05D003867 ORTHO05D004593 1.3e-64 251.5 127 91.3
unitig_744.g24298 Utricularia gibba HOM05D003867 ORTHO05D004593 6.5e-64 249.2 125 96.0
GSVIVG01020401001 Vitis vinifera HOM05D003867 ORTHO05D004593 5.5e-63 246.1 147 83.7
Aqoxy84s003 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 6.1e-54 216.1 254 44.9
Actinidia09669 Actinidia chinensis HOM05D003867 ORTHO05D004593 1.5e-52 211.5 127 83.5
MD16G1114800 Malus domestica HOM05D003867 ORTHO05D004593 4.8e-51 206.5 100 95.0
Nn8g40622 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.2e-49 201.8 102 93.1
Potri.008G177801 Populus trichocarpa HOM05D003867 ORTHO05D004593 4.3e-39 166.8 108 74.1
BcaC03g13233 Brassica carinata HOM05D003155 ORTHO05D012487 5.8e-36 156.4 102 76.5
C02p03650 Brassica napus HOM05D003867 ORTHO05D004593 3.5e-33 147.1 70 98.6
BolC2t06324H Brassica oleracea HOM05D003867 ORTHO05D004593 3.5e-33 147.1 70 98.6
Duzib128G1406 Durio zibethinus HOM05D003867 ORTHO05D004593 1.5e-28 131.7 197 37.6
BcaC03g13232 Brassica carinata HOM05D003867 ORTHO05D004593 4.9e-27 126.7 62 98.4
FAN03G1235 Fragaria x ananassa HOM05D003867 ORTHO05D004593 4.9e-27 126.7 64 93.8
Nn1g01167 Nelumbo nucifera HOM05D003867 ORTHO05D004593 8.3e-27 125.9 65 92.3
Nn1g01168 Nelumbo nucifera HOM05D003867 ORTHO05D004593 8.3e-27 125.9 65 92.3
FAN15G0422 Fragaria x ananassa HOM05D003867 ORTHO05D004593 5.4e-26 123.2 64 90.6
FAN07G1961 Fragaria x ananassa HOM05D003867 ORTHO05D004593 8.6e-24 115.9 59 91.5
FAN08G0425 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.9e-23 114.8 59 89.8
Pp3c3_8640 Physcomitrium patens HOM05D003867 ORTHO05D004593 6.2e-22 109.8 83 66.3
GSVIVG01013345001 Vitis vinifera HOM05D003867 ORTHO05D004593 3.1e-21 107.5 67 68.7
Atru.chr11.2285 Acer truncatum HOM05D003867 ORTHO05D004593 2.0e-20 104.8 67 71.6
Pp3c13_10840 Physcomitrium patens HOM05D003867 ORTHO05D004593 7.8e-17 92.8 48 89.6
Hund25436 Selenicereus undatus HOM05D000424 ORTHO05D008586 1.5e-15 88.6 168 35.1
FvH4_1g23805 Fragaria vesca HOM05D000280 ORTHO05D000632 7.3e-15 86.3 71 63.4
FvH4_3g23161 Fragaria vesca HOM05D011771 ORTHO05D014214 2.8e-14 84.3 72 62.5
FvH4_3g31747 Fragaria vesca HOM05D011771 ORTHO05D014214 6.2e-14 83.2 72 62.5
FvH4_7g28392 Fragaria vesca HOM05D003867 ORTHO05D196806 4.9e-11 73.6 61 63.9
Nitab4.5_0027010g0010 Nicotiana tabacum HOM05D003867 ORTHO05D004593 1.4e-10 72.0 61 73.8
Nitab4.5_0002184g0100 Nicotiana tabacum HOM05D003867 ORTHO05D004593 2.4e-10 71.2 61 62.3
FvH4_3g22840 Fragaria vesca HOM05D003404 ORTHO05D004052 1.3e-06 58.9 78 46.2
FvH4_4g35091 Fragaria vesca HOM05D001017 ORTHO05D014214 1.3e-06 58.9 78 46.2


User provided reference genes

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