Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0252211 Helianthus annuus HOM05D004173 ORTHO05D004885 2.2e-125 452.2 218 100.0
Lsat_1_v5_gn_9_60020 Lactuca sativa HOM05D004173 ORTHO05D004885 9.6e-60 234.2 256 55.5
Lsat_1_v5_gn_8_11461 Lactuca sativa HOM05D004173 ORTHO05D004885 1.6e-51 206.8 257 49.0
HanXRQChr08g0221561 Helianthus annuus HOM05D004173 ORTHO05D004885 7.6e-49 198.0 241 48.5
Lsat_1_v5_gn_2_126200 Lactuca sativa HOM05D004173 ORTHO05D004885 1.5e-41 173.7 245 44.5
ECA238G3313 Erigeron canadensis HOM05D004173 ORTHO05D004885 2.2e-35 153.3 236 42.4
vmacro09960 Vaccinium macrocarpon HOM05D004173 ORTHO05D004885 5.5e-31 138.7 152 49.3
Actinidia00999 Actinidia chinensis HOM05D004173 ORTHO05D004885 7.2e-31 138.3 160 50.0
Potri.019G058000 Populus trichocarpa HOM05D004173 ORTHO05D004885 2.1e-30 136.7 149 47.0
Ciclev10032642m.g Citrus clementina HOM05D004173 ORTHO05D004885 2.7e-30 136.3 158 48.1
Hma1.2p1_0264F.1_g106180 Hydrangea macrophylla HOM05D004173 ORTHO05D004885 2.7e-30 136.3 251 38.2
Rhsim09G0185800 Rhododendron simsii HOM05D004173 ORTHO05D004885 7.9e-30 134.8 166 47.6
Ah.12g064380 Amaranthus hybridus HOM05D004173 ORTHO05D004885 1.0e-29 134.4 180 45.0
Peaxi162Scf00739g00035 Petunia axillaris HOM05D004173 ORTHO05D004885 1.0e-29 134.4 214 39.7
Migut.F00606 Erythranthe guttata HOM05D004173 ORTHO05D004885 1.4e-29 134.0 152 49.3
Manes.10G001300 Manihot esculenta HOM05D004173 ORTHO05D004885 1.8e-29 133.7 166 45.2
Atru.chr12.182 Acer truncatum HOM05D004173 ORTHO05D004885 3.0e-29 132.9 164 45.7
Dinv34482 Davidia involucrata HOM05D004173 ORTHO05D004885 1.1e-28 131.0 152 49.3
Peaxi162Scf00739g00036 Petunia axillaris HOM05D004173 ORTHO05D004885 1.1e-28 131.0 213 38.5
A10p30940 Brassica napus HOM05D004173 ORTHO05D004885 2.0e-28 130.2 150 46.0
BraA10t45139Z Brassica rapa HOM05D004173 ORTHO05D004885 2.0e-28 130.2 150 46.0
PGSC0003DMG400016638 Solanum tuberosum HOM05D004173 ORTHO05D004885 2.6e-28 129.8 190 42.1
Prupe.2G264000 Prunus persica HOM05D004173 ORTHO05D004885 4.4e-28 129.0 160 45.0
C09p71450 Brassica napus HOM05D004173 ORTHO05D004885 5.7e-28 128.6 150 46.0
BolC9t59908H Brassica oleracea HOM05D004173 ORTHO05D004885 5.7e-28 128.6 150 46.0
Manes.07G143600 Manihot esculenta HOM05D004173 ORTHO05D004885 9.7e-28 127.9 155 45.8
Nitab4.5_0000171g0010 Nicotiana tabacum HOM05D004173 ORTHO05D004885 1.7e-27 127.1 206 41.3
FAN03G3439 Fragaria x ananassa HOM05D004173 ORTHO05D004885 2.2e-27 126.7 159 46.5
RcHm_v2.0_Chr1g0372231 Rosa chinensis HOM05D004173 ORTHO05D004885 2.2e-27 126.7 237 38.8
FvH4_7g25910 Fragaria vesca HOM05D004173 ORTHO05D004885 2.8e-27 126.3 163 44.8
FAN06G1323 Fragaria x ananassa HOM05D004173 ORTHO05D004885 2.8e-27 126.3 163 44.8
MD01G1167600 Malus domestica HOM05D004173 ORTHO05D004885 3.7e-27 125.9 161 44.7
CSS0045557 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 6.3e-27 125.2 232 38.8
Medtr3g093970 Medicago truncatula HOM05D004173 ORTHO05D004885 6.3e-27 125.2 198 41.9
CAN.G24.14 Capsicum annuum HOM05D004173 ORTHO05D004885 8.2e-27 124.8 210 40.0
FAN10G3668 Fragaria x ananassa HOM05D004173 ORTHO05D004885 8.2e-27 124.8 163 44.8
MD07G1233600 Malus domestica HOM05D004173 ORTHO05D004885 8.2e-27 124.8 163 44.8
Psat5g068840 Pisum sativum HOM05D004173 ORTHO05D004885 8.2e-27 124.8 200 39.0
CAN.G100.76 Capsicum annuum HOM05D004173 ORTHO05D004885 1.1e-26 124.4 196 41.3
Duzib114G0418 Durio zibethinus HOM05D004173 ORTHO05D004885 1.1e-26 124.4 154 44.8
Lalb_Chr23g0272201 Lupinus albus HOM05D004173 ORTHO05D004885 1.1e-26 124.4 160 45.0
Manes.07G141000 Manihot esculenta HOM05D004173 ORTHO05D004885 1.1e-26 124.4 155 45.2
Thecc.10G181100 Theobroma cacao HOM05D004173 ORTHO05D004885 1.4e-26 124.0 154 46.1
Lalb_Chr23g0272221 Lupinus albus HOM05D004173 ORTHO05D004885 1.8e-26 123.6 241 35.3
Solyc06g049020.1 Solanum lycopersicum HOM05D004173 ORTHO05D004885 2.4e-26 123.2 154 45.5
Sopen06g015380 Solanum pennellii HOM05D004173 ORTHO05D004885 2.4e-26 123.2 154 45.5
arahy.Tifrunner.gnm1.ann1.7F477P Arachis hypogaea HOM05D004173 ORTHO05D004885 3.1e-26 122.9 208 40.9
Oeu063983.1 Olea europaea HOM05D004173 ORTHO05D004885 4.1e-26 122.5 153 45.1
Sp6g37580 Schrenkiella parvula HOM05D004173 ORTHO05D004885 4.1e-26 122.5 152 44.7
Gohir.D05G280200 Gossypium hirsutum HOM05D004173 ORTHO05D004885 6.9e-26 121.7 153 45.1
SalBow3G3840 Salvia bowleyana HOM05D004173 ORTHO05D004885 6.9e-26 121.7 170 44.1
AUR62024933 Chenopodium quinoa HOM05D004173 ORTHO05D004885 1.5e-25 120.6 154 46.8
Glyma.06G142900 Glycine max HOM05D004173 ORTHO05D004885 1.5e-25 120.6 169 43.8
Phvul.009G044100 Phaseolus vulgaris HOM05D004173 ORTHO05D004885 1.5e-25 120.6 152 46.7
Cfa001210 Carpinus fangiana HOM05D004173 ORTHO05D004885 2.0e-25 120.2 156 41.0
CARHR207980 Cardamine hirsuta HOM05D004173 ORTHO05D004885 4.5e-25 119.0 159 44.0
Nitab4.5_0002279g0040 Nicotiana tabacum HOM05D004173 ORTHO05D004885 4.5e-25 119.0 167 40.1
Gohir.A05G278500 Gossypium hirsutum HOM05D004173 ORTHO05D004885 5.9e-25 118.6 153 43.1
AL6G15090 Arabidopsis lyrata HOM05D004173 ORTHO05D004885 7.7e-25 118.2 163 42.9
VMungo1309G0457 Vigna mungo HOM05D004173 ORTHO05D004885 7.7e-25 118.2 151 45.7
TWI73G0681 Tripterygium wilfordii HOM05D004173 ORTHO05D004885 1.0e-24 117.9 154 42.9
Gorai.009G293700 Gossypium raimondii HOM05D004173 ORTHO05D004885 1.3e-24 117.5 152 42.8
PGSC0003DMG400011642 Solanum tuberosum HOM05D004173 ORTHO05D004885 1.3e-24 117.5 197 38.6
Duzib128G1795 Durio zibethinus HOM05D004173 ORTHO05D004885 2.9e-24 116.3 154 42.9
TPR.G1732 Trifolium pratense HOM05D004173 ORTHO05D004885 2.9e-24 116.3 163 41.1
A09p49310 Brassica napus HOM05D004173 ORTHO05D004885 3.8e-24 115.9 157 43.9
BraA09t40385Z Brassica rapa HOM05D004173 ORTHO05D004885 3.8e-24 115.9 157 43.9
CANSAT25G2618 Cannabis sativa HOM05D004173 ORTHO05D004885 3.8e-24 115.9 163 40.5
Cpa.g.sc19.59 Carica papaya HOM05D004173 ORTHO05D004885 3.8e-24 115.9 173 41.0
BcaC07g39948 Brassica carinata HOM05D004173 ORTHO05D004885 6.5e-24 115.2 154 44.2
C08p31680 Brassica napus HOM05D004173 ORTHO05D004885 6.5e-24 115.2 154 44.2
Sp5g06150 Schrenkiella parvula HOM05D004173 ORTHO05D004885 6.5e-24 115.2 168 42.3
BcaC07g39950 Brassica carinata HOM05D004173 ORTHO05D004885 8.5e-24 114.8 155 44.5
BolC8t50789H Brassica oleracea HOM05D004173 ORTHO05D004885 8.5e-24 114.8 157 43.9
Lj1g0005357 Lotus japonicus HOM05D004173 ORTHO05D004885 8.5e-24 114.8 187 40.6
CARHR166510 Cardamine hirsuta HOM05D004173 ORTHO05D004885 1.1e-23 114.4 166 42.8
Ca_16866_v3 Cicer arietinum L. HOM05D004173 ORTHO05D004885 1.1e-23 114.4 172 41.9
Ca_29953_v3 Cicer arietinum L. HOM05D004173 ORTHO05D004885 1.1e-23 114.4 172 41.9
THA.LOC104803208 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 1.9e-23 113.6 162 41.4
AL5G37690 Arabidopsis lyrata HOM05D004173 ORTHO05D004885 3.2e-23 112.8 190 38.4
Thhalv10006215m.g Eutrema salsugineum HOM05D004173 ORTHO05D004885 3.2e-23 112.8 159 43.4
Glyma.04G222500 Glycine max HOM05D004173 ORTHO05D004885 3.2e-23 112.8 149 45.6
AT3G56360 Arabidopsis thaliana HOM05D004173 ORTHO05D004885 4.2e-23 112.5 157 43.9
THA.LOC104826832 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 5.5e-23 112.1 155 42.6
Sed0028126 Sechium edule HOM05D004173 ORTHO05D004885 9.4e-23 111.3 175 36.0
THA.LOC104813511 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 9.4e-23 111.3 170 41.8
AT5G05250 Arabidopsis thaliana HOM05D004173 ORTHO05D004885 1.2e-22 110.9 153 41.8
Thhalv10014558m.g Eutrema salsugineum HOM05D004173 ORTHO05D004885 1.2e-22 110.9 154 43.5
QL08p064831 Quercus lobata HOM05D004173 ORTHO05D004885 1.6e-22 110.5 178 36.5
Carub.0006s0418 Capsella rubella HOM05D004173 ORTHO05D004885 2.1e-22 110.2 161 41.0
SGA_v2.0_scaffold60G20889 Striga asiatica HOM05D004173 ORTHO05D004885 2.7e-22 109.8 157 40.8
Sc10g0002990 Simmondsia chinensis HOM05D004173 ORTHO05D004885 3.6e-22 109.4 156 42.9
CAN.G203.54 Capsicum annuum HOM05D004173 ORTHO05D004885 4.7e-22 109.0 168 38.1
DCAR_014665 Daucus carota HOM05D004173 ORTHO05D004885 4.7e-22 109.0 181 37.0
Gohir.A13G006500 Gossypium hirsutum HOM05D004173 ORTHO05D004885 4.7e-22 109.0 175 37.1
Gohir.D13G006700 Gossypium hirsutum HOM05D004173 ORTHO05D004885 6.1e-22 108.6 154 40.3
Sopen05g030770 Solanum pennellii HOM05D004173 ORTHO05D004885 6.1e-22 108.6 185 35.7
Gorai.013G006900 Gossypium raimondii HOM05D004173 ORTHO05D004885 7.9e-22 108.2 154 39.6
A04p03290 Brassica napus HOM05D004173 ORTHO05D004885 3.0e-21 106.3 160 41.2
BraA04t16106Z Brassica rapa HOM05D004173 ORTHO05D004885 3.0e-21 106.3 160 41.2
Carub.0005s2314 Capsella rubella HOM05D004173 ORTHO05D004885 3.0e-21 106.3 166 41.0
BolC4t25192H Brassica oleracea HOM05D004173 ORTHO05D004885 5.2e-21 105.5 158 41.8
CsaV3_6G002310 Cucumis sativus L. HOM05D004173 ORTHO05D004885 5.2e-21 105.5 164 37.8
Eucgr.J00114 Eucalyptus grandis HOM05D004173 ORTHO05D004885 8.8e-21 104.8 206 35.0
BcaC02g09832 Brassica carinata HOM05D004173 ORTHO05D004885 1.1e-20 104.4 158 41.1
C04p36060 Brassica napus HOM05D004173 ORTHO05D004885 1.1e-20 104.4 158 41.1
MBI18_g38876_MAGBIO Magnolia biondii HOM05D004173 ORTHO05D004885 1.1e-20 104.4 166 41.6
THA.LOC104824365 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 2.0e-20 103.6 170 40.6
BcaB02g08372 Brassica carinata HOM05D004173 ORTHO05D004885 3.3e-20 102.8 161 42.2
CiPaw.01G306500 Carya illinoinensis HOM05D004173 ORTHO05D004885 3.3e-20 102.8 148 41.2
AUR62030611 Chenopodium quinoa HOM05D004173 ORTHO05D004885 3.3e-20 102.8 140 45.7
MELO3C020007.2 Cucumis melo HOM05D004173 ORTHO05D004885 9.7e-20 101.3 178 34.3
BcaC06g32235 Brassica carinata HOM05D004173 ORTHO05D004885 2.8e-19 99.8 150 40.0
Cc10_g16360 Coffea canephora HOM05D004173 ORTHO05D004885 2.8e-19 99.8 215 34.9
Dinv21845 Davidia involucrata HOM05D004173 ORTHO05D004885 2.8e-19 99.8 195 40.0
Aa31LG10G11250 Aethionema arabicum HOM05D004173 ORTHO05D004885 3.7e-19 99.4 164 37.2
unitig_37.g11910 Utricularia gibba HOM05D004173 ORTHO05D004885 8.2e-19 98.2 145 39.3
Aa31LG11G6110 Aethionema arabicum HOM05D004173 ORTHO05D004885 3.1e-18 96.3 157 37.6
ATR0776G079 Amborella trichopoda HOM05D004173 ORTHO05D004885 3.1e-18 96.3 178 36.0
ECA232G0972 Erigeron canadensis HOM05D000041 ORTHO05D000452 4.1e-18 95.9 151 44.4
PGR044G2104 Punica granatum HOM05D004173 ORTHO05D004885 5.3e-18 95.5 163 39.3
MSTRG.18054 Avicennia marina HOM05D004173 ORTHO05D004885 7.0e-18 95.1 169 39.6
Haze_17356 Corylus avellana HOM05D004173 ORTHO05D004885 9.1e-18 94.7 208 32.7
Oeu025786.2 Olea europaea HOM05D004173 ORTHO05D004885 2.6e-17 93.2 187 32.6
Peaxi162Scf00167g01213 Petunia axillaris HOM05D004173 ORTHO05D004885 2.6e-17 93.2 149 39.6
ATR0124G034 Amborella trichopoda HOM05D004173 ORTHO05D004885 7.7e-17 91.7 228 30.7
Nn5g26849 Nelumbo nucifera HOM05D004173 ORTHO05D004885 7.7e-17 91.7 165 35.2
PSO675G3687 Papaver somniferum HOM05D004173 ORTHO05D004885 7.7e-17 91.7 186 35.5
ClCG11G005670 Citrullus lanatus HOM05D004173 ORTHO05D004885 1.0e-16 91.3 128 42.2
Aqoxy5G02899 Aquilegia oxysepala HOM05D004173 ORTHO05D004885 2.2e-16 90.1 168 35.1
TAR365G0355 Trochodendron aralioides HOM05D004173 ORTHO05D004885 5.0e-16 89.0 242 32.2
PSO104G0082 Papaver somniferum HOM05D004173 ORTHO05D004885 6.5e-16 88.6 187 35.3
TAR365G1150 Trochodendron aralioides HOM05D004173 ORTHO05D004885 6.5e-16 88.6 240 31.7
EL10Ac2g02643 Beta vulgaris HOM05D004173 ORTHO05D004885 8.5e-16 88.2 207 37.7
PSO478G3294 Papaver somniferum HOM05D004173 ORTHO05D004885 8.5e-16 88.2 176 34.7
Nn2g10306 Nelumbo nucifera HOM05D004173 ORTHO05D004885 1.1e-15 87.8 166 30.7
PSO421G0661 Papaver somniferum HOM05D004173 ORTHO05D004885 1.1e-15 87.8 217 31.8
PSO266G0063 Papaver somniferum HOM05D004173 ORTHO05D004885 1.5e-15 87.4 173 34.7
PSO063G2850 Papaver somniferum HOM05D004173 ORTHO05D004885 3.2e-15 86.3 196 33.2
HPP92_012755 Vanilla planifolia HOM05D004173 ORTHO05D004885 4.7e-14 82.4 189 30.2
Zm00001eb215400 Zea mays HOM05D004173 ORTHO05D004885 6.1e-14 82.0 149 32.9
Gohir.A05G403100 Gossypium hirsutum HOM05D004173 ORTHO05D004885 4.0e-13 79.3 113 42.5
Gohir.D04G012400 Gossypium hirsutum HOM05D004173 ORTHO05D004885 4.0e-13 79.3 113 42.5
CDE02G3998 Ceratophyllum demersum HOM05D004173 ORTHO05D004885 5.2e-13 79.0 148 33.1
CSS0041127 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 6.7e-13 78.6 191 34.0
CSS0049649 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 6.7e-13 78.6 191 34.0
Zm00001eb056440 Zea mays HOM05D004173 ORTHO05D004885 1.5e-12 77.4 152 32.9
ECA233G6175 Erigeron canadensis HOM05D004173 ORTHO05D004885 2.0e-12 77.0 146 37.7
Gorai.012G014700 Gossypium raimondii HOM05D004173 ORTHO05D004885 4.4e-12 75.9 113 41.6
Pp3c2_14400 Physcomitrium patens HOM05D004173 ORTHO05D004885 7.5e-12 75.1 165 31.5
CDE04G1376 Ceratophyllum demersum HOM05D004173 ORTHO05D004885 1.7e-11 73.9 169 31.4
Os03g0736900 Oryza sativa ssp. japonica HOM05D004173 ORTHO05D004885 3.1e-10 69.7 158 31.6
Sc05g0006880 Simmondsia chinensis HOM05D004173 ORTHO05D004885 9.1e-10 68.2 151 32.5
SEGI_03811 Sequoiadendron giganteum HOM05D004173 ORTHO05D004885 2.0e-09 67.0 168 31.0
Phvul.009G044000 Phaseolus vulgaris HOM05D004173 ORTHO05D004885 3.5e-09 66.2 66 50.0
Nitab4.5_0002846g0010 Nicotiana tabacum HOM05D004173 ORTHO05D004885 1.0e-08 64.7 170 34.1
SEGI_33270 Sequoiadendron giganteum HOM05D004173 ORTHO05D004885 1.0e-08 64.7 184 31.0
Actinidia07794 Actinidia chinensis HOM05D004173 ORTHO05D004885 2.2e-08 63.5 96 42.7
Ah.14g087000 Amaranthus hybridus HOM05D004173 ORTHO05D004885 2.2e-08 63.5 190 30.5
Rhsim10G0215400 Rhododendron simsii HOM05D000820 ORTHO05D016785 2.2e-08 63.5 100 44.0


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