Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0251491 Helianthus annuus HOM05D007902 ORTHO05D009839 1.8e-81 305.8 155 100.0
Lsat_1_v5_gn_9_59200 Lactuca sativa HOM05D007902 ORTHO05D009839 1.5e-59 233.0 159 73.6
Dinv21823 Davidia involucrata HOM05D007902 ORTHO05D009839 3.4e-43 178.7 153 60.1
Actinidia07804 Actinidia chinensis HOM05D007902 ORTHO05D009839 5.8e-43 177.9 153 60.8
Hma1.2p1_0292F.1_g115760 Hydrangea macrophylla HOM05D007902 ORTHO05D009839 9.9e-43 177.2 154 60.4
vmacro09979 Vaccinium macrocarpon HOM05D007902 ORTHO05D009839 2.1e-40 169.5 146 57.5
TAR623G0347 Trochodendron aralioides HOM05D007902 ORTHO05D009839 3.6e-37 158.7 152 57.2
Migut.F00588 Erythranthe guttata HOM05D007902 ORTHO05D009839 1.8e-36 156.4 148 55.4
CAN.G591.5 Capsicum annuum HOM05D007902 ORTHO05D009839 9.0e-36 154.1 157 54.8
Manes.07G138200 Manihot esculenta HOM05D007902 ORTHO05D009839 1.2e-35 153.7 158 57.0
QL08p064506 Quercus lobata HOM05D007902 ORTHO05D009839 3.8e-34 148.7 156 51.3
Peaxi162Scf00464g00015 Petunia axillaris HOM05D007902 ORTHO05D009839 1.1e-33 147.1 155 51.0
CiPaw.01G304600 Carya illinoinensis HOM05D007902 ORTHO05D009839 3.2e-33 145.6 164 49.4
Cc02_g05590 Coffea canephora HOM05D007902 ORTHO05D009839 3.2e-33 145.6 155 54.8
Haze_17334 Corylus avellana HOM05D007902 ORTHO05D009839 3.2e-33 145.6 167 47.3
Cpa.g.sc19.89 Carica papaya HOM05D007902 ORTHO05D009839 4.2e-33 145.2 163 50.3
Sopen06g015820 Solanum pennellii HOM05D007902 ORTHO05D009839 7.1e-33 144.4 158 51.9
Nn2g10362 Nelumbo nucifera HOM05D007902 ORTHO05D009839 9.3e-33 144.1 152 53.9
Potri.019G049100 Populus trichocarpa HOM05D007902 ORTHO05D009839 3.5e-32 142.1 154 52.6
Sabra19G0058600 Salix brachista HOM05D007902 ORTHO05D009839 7.9e-32 141.0 154 52.6
Ca_06023_v3 Cicer arietinum L. HOM05D007902 ORTHO05D009839 3.0e-31 139.0 156 50.0
Ciclev10032767m.g Citrus clementina HOM05D007902 ORTHO05D009839 5.1e-31 138.3 160 48.8
Eucgr.G03123 Eucalyptus grandis HOM05D007902 ORTHO05D009839 5.1e-31 138.3 152 49.3
SalBow5G2004 Salvia bowleyana HOM05D007902 ORTHO05D009839 6.7e-31 137.9 155 52.9
FvH4_7g25601 Fragaria vesca HOM05D007902 ORTHO05D009839 1.9e-30 136.3 143 51.7
EL10Ac2g04265 Beta vulgaris HOM05D007902 ORTHO05D009839 2.5e-30 136.0 147 50.3
FAN03G2841 Fragaria x ananassa HOM05D001122 ORTHO05D001877 2.5e-30 136.0 143 51.7
FAN01G1070 Fragaria x ananassa HOM05D001122 ORTHO05D001877 3.3e-30 135.6 143 51.0
Rhsim09G0183800 Rhododendron simsii HOM05D007902 ORTHO05D009839 4.3e-30 135.2 182 46.7
arahy.Tifrunner.gnm1.ann1.C7E7HV Arachis hypogaea HOM05D007902 ORTHO05D009839 8.1e-29 131.0 154 46.1
PGR142G4074 Punica granatum HOM05D007902 ORTHO05D009839 1.4e-28 130.2 186 41.4
TWI53G0910 Tripterygium wilfordii HOM05D007902 ORTHO05D009839 1.4e-28 130.2 127 55.9
arahy.Tifrunner.gnm1.ann1.0H4UJT Arachis hypogaea HOM05D007902 ORTHO05D009839 1.8e-28 129.8 154 45.5
RcHm_v2.0_Chr1g0371741 Rosa chinensis HOM05D007902 ORTHO05D009839 4.0e-28 128.6 142 48.6
CANSAT56G3130 Cannabis sativa HOM05D007902 ORTHO05D009839 2.0e-27 126.3 139 53.2
BraA10t45132Z Brassica rapa HOM05D007902 ORTHO05D009839 4.5e-27 125.2 158 46.2
Nitab4.5_0002713g0030 Nicotiana tabacum HOM05D007902 ORTHO05D009839 5.8e-27 124.8 155 47.7
COL.COLO4_26867 Corchorus olitorius HOM05D005928 ORTHO05D007500 7.6e-27 124.4 161 49.1
MD01G1163300 Malus domestica HOM05D007902 ORTHO05D009839 1.3e-26 123.6 144 48.6
Prupe.2G261300 Prunus persica HOM05D007902 ORTHO05D009839 1.3e-26 123.6 153 45.8
Gohir.A13G005700 Gossypium hirsutum HOM05D007902 ORTHO05D009839 2.2e-26 122.9 159 47.2
Aqoxy4G02352 Aquilegia oxysepala HOM05D007902 ORTHO05D009839 2.9e-26 122.5 180 42.8
Gohir.D13G005400 Gossypium hirsutum HOM05D007902 ORTHO05D009839 2.9e-26 122.5 159 46.5
Gorai.013G006100 Gossypium raimondii HOM05D007902 ORTHO05D009839 2.9e-26 122.5 159 46.5
Nitab4.5_0000263g0270 Nicotiana tabacum HOM05D007902 ORTHO05D009839 8.4e-26 120.9 155 47.1
C09p71380 Brassica napus HOM05D007902 ORTHO05D009839 1.1e-25 120.6 160 46.2
BcaC06g32241 Brassica carinata HOM05D007902 ORTHO05D009839 2.5e-25 119.4 160 45.6
SGA_v2.0_scaffold60G20910 Striga asiatica HOM05D005928 ORTHO05D007500 2.5e-25 119.4 179 42.5
FAN06G1561 Fragaria x ananassa HOM05D007902 ORTHO05D009839 3.2e-25 119.0 143 48.3
MD07G1231300 Malus domestica HOM05D007902 ORTHO05D009839 3.2e-25 119.0 153 44.4
Hund13474 Selenicereus undatus HOM05D007902 ORTHO05D009839 7.1e-25 117.9 176 39.8
BolC9t59901H Brassica oleracea HOM05D007902 ORTHO05D009839 9.3e-25 117.5 160 45.6
Psat1g014880 Pisum sativum HOM05D007902 ORTHO05D009839 9.3e-25 117.5 126 49.2
Atru.chr12.150 Acer truncatum HOM05D005928 ORTHO05D007500 1.2e-24 117.1 181 44.2
AT5G05330 Arabidopsis thaliana HOM05D007902 ORTHO05D009839 6.0e-24 114.8 161 43.5
PGSC0003DMG400029078 Solanum tuberosum HOM05D007902 ORTHO05D009839 1.3e-23 113.6 116 54.3
Sp6g37500 Schrenkiella parvula HOM05D007902 ORTHO05D009839 5.1e-23 111.7 161 42.9
Lj1C1068G17 Lonicera japonica HOM05D004500 ORTHO05D009839 6.7e-23 111.3 143 46.9
PSO017G6410 Papaver somniferum HOM05D007902 ORTHO05D009839 6.7e-23 111.3 178 41.0
ECA232G2170 Erigeron canadensis HOM05D001122 ORTHO05D001877 2.5e-22 109.4 75 69.3
LjContig00357g0001230 Lotus japonicus HOM05D007902 ORTHO05D009839 3.3e-22 109.0 162 43.8
BcaC03g13156 Brassica carinata HOM05D007902 ORTHO05D009839 4.3e-22 108.6 152 44.7
BcaB05g21722 Brassica carinata HOM05D007902 ORTHO05D009839 7.4e-22 107.8 156 42.3
CARHR207920 Cardamine hirsuta HOM05D007902 ORTHO05D009839 1.6e-21 106.7 162 43.2
Thhalv10014946m.g Eutrema salsugineum HOM05D007902 ORTHO05D009839 2.1e-21 106.3 137 45.3
unitig_52.g16781 Utricularia gibba HOM05D007902 ORTHO05D009839 2.1e-21 106.3 127 44.9
BraA02t04842Z Brassica rapa HOM05D007902 ORTHO05D009839 2.8e-21 105.9 154 42.9
Carub.0006s0425 Capsella rubella HOM05D007902 ORTHO05D009839 3.7e-21 105.5 161 42.2
Medtr0191s0020 Medicago truncatula HOM05D007902 ORTHO05D009839 6.2e-21 104.8 134 47.0
AL6G15200 Arabidopsis lyrata HOM05D007902 ORTHO05D009839 1.1e-20 104.0 161 41.6
C02p02280 Brassica napus HOM05D007902 ORTHO05D009839 1.4e-20 103.6 152 44.1
Thecc.10G175100 Theobroma cacao HOM05D007902 ORTHO05D009839 2.0e-19 99.8 110 53.6
BolC2t06195H Brassica oleracea HOM05D007902 ORTHO05D009839 1.0e-18 97.4 140 42.1
CDE07G0481 Ceratophyllum demersum HOM05D007902 ORTHO05D009839 1.7e-18 96.7 125 45.6
PSO407G0011 Papaver somniferum HOM05D007902 ORTHO05D009839 6.5e-18 94.7 154 42.9
Oeu054429.1 Olea europaea HOM05D007902 ORTHO05D009839 5.5e-17 91.7 112 46.4
TAR623G0840 Trochodendron aralioides HOM05D007902 ORTHO05D009839 1.3e-15 87.0 82 58.5
Lj1C1068T20 Lonicera japonica HOM05D007902 ORTHO05D009839 8.7e-15 84.3 76 55.3
Sc10g0002880 Simmondsia chinensis HOM05D007902 ORTHO05D009839 3.3e-14 82.4 79 58.2
Lj1A965T42 Lonicera japonica HOM05D007902 ORTHO05D009839 9.7e-14 80.9 75 53.3
Lalb_Chr17g0347071 Lupinus albus HOM05D007902 ORTHO05D009839 9.7e-14 80.9 92 44.6
ATR0124G023 Amborella trichopoda HOM05D000727 ORTHO05D000541 3.8e-10 68.9 185 30.3
MBI03_g40382_MAGBIO Magnolia biondii HOM05D034203 ORTHO05D009839 8.5e-10 67.8 74 50.0
CDE04G2894 Ceratophyllum demersum HOM05D004203 ORTHO05D004830 1.9e-09 66.6 126 34.9
Cc11_g04510 Coffea canephora HOM05D000727 ORTHO05D000541 2.5e-09 66.2 167 31.7
Os08g0101100 Oryza sativa ssp. japonica HOM05D000727 ORTHO05D000541 2.5e-09 66.2 170 31.2
COL.COLO4_08802 Corchorus olitorius HOM05D000576 ORTHO05D000368 5.5e-09 65.1 49 65.3
RhsimUnG0102400 Rhododendron simsii HOM05D000727 ORTHO05D000541 7.2e-09 64.7 178 28.1
PSO339G3557 Papaver somniferum HOM05D000727 ORTHO05D000541 2.7e-08 62.8 141 34.8
SGA_v2.0_scaffold127G33972 Striga asiatica HOM05D000727 ORTHO05D000541 2.7e-08 62.8 180 31.7
AUR62012352 Chenopodium quinoa HOM05D038520 ORTHO05D009839 3.6e-08 62.4 72 41.7
DCAR_030351 Daucus carota HOM05D000727 ORTHO05D000541 6.1e-08 61.6 163 30.7
PSO206G0034 Papaver somniferum HOM05D000727 ORTHO05D000541 7.9e-08 61.2 141 34.0
HanXRQChr17g0540661 Helianthus annuus HOM05D000727 ORTHO05D000541 1.4e-07 60.5 162 30.9
MSTRG.13668 Avicennia marina HOM05D000727 ORTHO05D000541 1.8e-07 60.1 182 29.1
ECA246G0005 Erigeron canadensis HOM05D000727 ORTHO05D000541 8.8e-07 57.8 167 28.1
Migut.E00666 Erythranthe guttata HOM05D000727 ORTHO05D000541 8.8e-07 57.8 190 30.5
MBI18_g32335_MAGBIO Magnolia biondii HOM05D034203 ORTHO05D009839 8.8e-07 57.8 60 51.7
MBI19_g06976_MAGBIO Magnolia biondii HOM05D034203 ORTHO05D009839 1.1e-06 57.4 55 52.7
BcaNung01853 Brassica carinata HOM05D003223 ORTHO05D014735 7.4e-06 54.7 50 60.0
Aa31LG11G2850 Aethionema arabicum HOM05D000727 ORTHO05D000541 9.7e-06 54.3 185 29.2
MSTRG.2077 Avicennia marina HOM05D000727 ORTHO05D000541 9.7e-06 54.3 177 27.7
unitig_699.g19642 Utricularia gibba HOM05D001166 ORTHO05D000992 9.7e-06 54.3 149 28.2


User provided reference genes

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