Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0251311 Helianthus annuus HOM05D001393 ORTHO05D007477 0.0e+00 1272.3 730 100.0
Lsat_1_v5_gn_1_106561 Lactuca sativa HOM05D001393 ORTHO05D007477 2.1e-127 460.7 755 44.0
ECA248G1228 Erigeron canadensis HOM05D001393 ORTHO05D007477 6.8e-126 455.7 553 55.9
vmacro13675 Vaccinium macrocarpon HOM05D001393 ORTHO05D007477 4.0e-94 350.1 718 38.6
Actinidia21547 Actinidia chinensis HOM05D001393 ORTHO05D007477 1.9e-91 341.3 739 35.9
Cfa010777 Carpinus fangiana HOM05D001393 ORTHO05D007477 4.6e-90 336.7 745 36.8
Dinv09348 Davidia involucrata HOM05D001393 ORTHO05D007477 4.6e-90 336.7 593 41.3
GSVIVG01032121001 Vitis vinifera HOM05D001393 ORTHO05D007477 1.3e-89 335.1 747 37.3
Thecc.01G409700 Theobroma cacao HOM05D001393 ORTHO05D007477 3.6e-87 327.0 749 36.7
CSS0038724 Camellia sinensis var. sinensis HOM05D001393 ORTHO05D007477 1.5e-85 321.6 622 38.3
PGSC0003DMG401023992 Solanum tuberosum HOM05D001393 ORTHO05D007477 2.0e-85 321.2 567 41.8
Sopen11g002980 Solanum pennellii HOM05D001393 ORTHO05D007477 4.9e-84 316.6 602 39.9
CiPaw.14G000700 Carya illinoinensis HOM05D001393 ORTHO05D007477 1.1e-83 315.5 732 36.6
Solyc11g007060.2 Solanum lycopersicum HOM05D001393 ORTHO05D007477 1.1e-83 315.5 563 41.4
CAN.G1513.5 Capsicum annuum HOM05D001393 ORTHO05D007477 1.6e-82 311.6 562 39.7
Atru.chr11.2612 Acer truncatum HOM05D001393 ORTHO05D007477 4.0e-78 297.0 718 34.4
Ciclev10030722m.g Citrus clementina HOM05D001393 ORTHO05D007477 5.3e-78 296.6 725 34.8
FAN06G3336 Fragaria x ananassa HOM05D001393 ORTHO05D007477 2.0e-77 294.7 583 36.9
FAN03G3510 Fragaria x ananassa HOM05D001393 ORTHO05D007477 4.5e-77 293.5 607 36.6
Migut.N01605 Erythranthe guttata HOM05D001393 ORTHO05D007477 7.6e-77 292.7 733 34.7
TAR623G0231 Trochodendron aralioides HOM05D001393 ORTHO05D007477 1.3e-76 292.0 544 38.4
Manes.10G141000 Manihot esculenta HOM05D001393 ORTHO05D007477 1.7e-76 291.6 761 34.8
Prupe.2G015000 Prunus persica HOM05D001393 ORTHO05D007477 1.7e-76 291.6 595 37.5
RcHm_v2.0_Chr1g0316471 Rosa chinensis HOM05D001393 ORTHO05D007477 1.7e-76 291.6 595 37.3
FvH4_7g01170 Fragaria vesca HOM05D001393 ORTHO05D007477 1.4e-75 288.5 583 36.5
COL.COLO4_04862 Corchorus olitorius HOM05D001393 ORTHO05D007477 1.9e-75 288.1 760 33.3
MD02G1309200 Malus domestica HOM05D001393 ORTHO05D007477 1.9e-75 288.1 744 35.5
QL04p008271 Quercus lobata HOM05D001393 ORTHO05D007477 4.2e-75 287.0 763 34.2
Gohir.D08G164900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 7.1e-75 286.2 750 33.6
TWI73G0713 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 9.3e-75 285.8 538 37.9
Cc02_g28120 Coffea canephora HOM05D001393 ORTHO05D007477 2.1e-74 284.6 451 41.7
FAN03G1765 Fragaria x ananassa HOM05D001393 ORTHO05D007477 3.5e-74 283.9 630 35.4
Gohir.A08G143900 Gossypium hirsutum HOM05D001393 ORTHO05D007477 1.0e-73 282.3 748 32.9
FAN01G2686 Fragaria x ananassa HOM05D001393 ORTHO05D007477 5.1e-73 280.0 554 36.8
Potri.001G265100 Populus trichocarpa HOM05D001393 ORTHO05D007477 5.1e-73 280.0 759 33.6
PGR044G2234 Punica granatum HOM05D001393 ORTHO05D007477 4.3e-72 276.9 773 35.3
Cpa.g.sc125.11 Carica papaya HOM05D001393 ORTHO05D007477 1.3e-71 275.4 568 38.4
Sc11g0009120 Simmondsia chinensis HOM05D001393 ORTHO05D007477 1.3e-71 275.4 750 32.8
Gorai.004G171900 Gossypium raimondii HOM05D001393 ORTHO05D007477 2.8e-71 274.2 756 33.1
TWI09G0484 Tripterygium wilfordii HOM05D001393 ORTHO05D007477 2.8e-71 274.2 550 37.6
Sabra16G0162900 Salix brachista HOM05D001393 ORTHO05D007477 3.7e-71 273.9 761 33.6
Duzib133G0545 Durio zibethinus HOM05D001393 ORTHO05D007477 6.2e-71 273.1 725 34.6
DCAR_029678 Daucus carota HOM05D001393 ORTHO05D007477 1.1e-70 272.3 542 39.1
CsaV3_7G030970 Cucumis sativus L. HOM05D001393 ORTHO05D007477 2.4e-70 271.2 626 35.1
ClCG09G004070 Citrullus lanatus HOM05D001393 ORTHO05D007477 6.9e-70 269.6 613 36.7
SalBow7G4183 Salvia bowleyana HOM05D001393 ORTHO05D007477 1.2e-69 268.9 726 33.1
Oeu049495.1 Olea europaea HOM05D001393 ORTHO05D007477 2.0e-69 268.1 613 34.9
MELO3C023559.2 Cucumis melo HOM05D001393 ORTHO05D007477 2.2e-68 264.6 471 39.1
Nitab4.5_0000001g0230 Nicotiana tabacum HOM05D001393 ORTHO05D007477 2.2e-68 264.6 560 38.4
PSO339G5226 Papaver somniferum HOM05D001393 ORTHO05D007477 3.8e-68 263.8 407 41.0
Sed0015725 Sechium edule HOM05D001393 ORTHO05D007477 4.9e-68 263.5 620 37.3
Eucgr.J01280 Eucalyptus grandis HOM05D001393 ORTHO05D007477 7.1e-67 259.6 560 37.3
MSTRG.28063 Avicennia marina HOM05D001393 ORTHO05D007477 2.1e-66 258.1 497 37.2
SGA_v2.0_scaffold5G02964 Striga asiatica HOM05D001393 ORTHO05D007477 2.7e-66 257.7 598 35.6
Dinv43433 Davidia involucrata HOM05D001393 ORTHO05D007477 3.9e-65 253.8 267 51.7
CANSAT80G1121 Cannabis sativa HOM05D001393 ORTHO05D007477 6.7e-65 253.1 729 30.7
AUR62023073 Chenopodium quinoa HOM05D001393 ORTHO05D007477 6.7e-65 253.1 757 31.0
EL10Ac2g04339 Beta vulgaris HOM05D001393 ORTHO05D007477 2.5e-64 251.1 731 32.7
Nitab4.5_0001761g0330 Nicotiana tabacum HOM05D001393 ORTHO05D007477 2.5e-64 251.1 585 36.6
MD07G1012500 Malus domestica HOM05D001393 ORTHO05D007477 3.3e-64 250.8 599 36.6
Potri.009G060000 Populus trichocarpa HOM05D001393 ORTHO05D007477 3.3e-64 250.8 607 35.4
Peaxi162Scf00152g01336 Petunia axillaris HOM05D001393 ORTHO05D007477 5.7e-64 250.0 442 43.0
AUR62009391 Chenopodium quinoa HOM05D001393 ORTHO05D007477 9.7e-64 249.2 708 30.5
PSO384G0142 Papaver somniferum HOM05D001393 ORTHO05D007477 2.8e-63 247.7 636 33.8
SalBow6G6124 Salvia bowleyana HOM05D001393 ORTHO05D007477 4.8e-63 246.9 636 35.4
Aqoxy1G00280 Aquilegia oxysepala HOM05D001393 ORTHO05D007477 1.2e-61 242.3 579 35.4
Nn2g15307 Nelumbo nucifera HOM05D001393 ORTHO05D007477 2.0e-61 241.5 815 31.5
Aa31LG11G7400 Aethionema arabicum HOM05D001393 ORTHO05D007477 4.5e-61 240.4 624 33.3
MBI04_g36081_MAGBIO Magnolia biondii HOM05D001393 ORTHO05D007477 2.5e-59 234.6 407 37.8
Hund21482 Selenicereus undatus HOM05D001393 ORTHO05D007477 9.4e-59 232.6 629 32.9
MSTRG.5028 Avicennia marina HOM05D001393 ORTHO05D007477 1.6e-58 231.9 628 32.5
Phvul.011G009600 Phaseolus vulgaris HOM05D001393 ORTHO05D007477 4.6e-58 230.3 605 33.4
Psat7g196360 Pisum sativum HOM05D001393 ORTHO05D007477 7.9e-58 229.6 583 33.6
arahy.Tifrunner.gnm1.ann1.S6CP9J Arachis hypogaea HOM05D001393 ORTHO05D007477 2.8e-55 221.1 727 31.1
arahy.Tifrunner.gnm1.ann1.C4Q3NJ Arachis hypogaea HOM05D001393 ORTHO05D007477 8.2e-55 219.5 729 31.4
Thhalv10003674m.g Eutrema salsugineum HOM05D001393 ORTHO05D007477 8.2e-55 219.5 569 35.0
VMungo1127G2137 Vigna mungo HOM05D001393 ORTHO05D007477 1.8e-54 218.4 643 31.6
TPR.G3660 Trifolium pratense HOM05D001393 ORTHO05D007477 5.3e-54 216.9 603 33.3
Ca_19581_v3 Cicer arietinum L. HOM05D001393 ORTHO05D007477 1.5e-53 215.3 616 31.5
BcaC06g30834 Brassica carinata HOM05D001393 ORTHO05D007477 3.4e-53 214.2 493 34.7
CARHR184320 Cardamine hirsuta HOM05D001393 ORTHO05D007477 4.5e-53 213.8 651 31.6
A06p39440 Brassica napus HOM05D001393 ORTHO05D007477 2.9e-52 211.1 601 33.3
BraA06t26859Z Brassica rapa HOM05D001393 ORTHO05D007477 2.9e-52 211.1 601 33.3
Sp2g18440 Schrenkiella parvula HOM05D001393 ORTHO05D007477 2.9e-52 211.1 579 32.6
Lj3g0000057 Lotus japonicus HOM05D001393 ORTHO05D007477 3.8e-52 210.7 613 32.5
AL8G20040 Arabidopsis lyrata HOM05D001393 ORTHO05D007477 7.2e-51 206.5 733 31.8
BolC7t44402H Brassica oleracea HOM05D001393 ORTHO05D007477 1.6e-50 205.3 714 31.1
Glyma.09G228900 Glycine max HOM05D001393 ORTHO05D007477 1.6e-50 205.3 711 29.4
C07p38830 Brassica napus HOM05D001393 ORTHO05D007477 3.6e-50 204.1 714 31.0
AT5G47940 Arabidopsis thaliana HOM05D001393 ORTHO05D007477 1.0e-49 202.6 717 31.0
Glyma.12G007700 Glycine max HOM05D001393 ORTHO05D007477 1.4e-49 202.2 711 28.8
Carub.0008s0749 Capsella rubella HOM05D001393 ORTHO05D007477 3.0e-49 201.1 565 32.4
Sabra09G0044200 Salix brachista HOM05D001393 ORTHO05D007477 3.0e-49 201.1 744 29.7
Medtr4g037495 Medicago truncatula HOM05D001393 ORTHO05D007477 2.0e-48 198.4 622 31.5
Lj9A633T62 Lonicera japonica HOM05D001393 ORTHO05D007477 4.5e-45 187.2 574 34.5
CDE05G0268 Ceratophyllum demersum HOM05D001393 ORTHO05D007477 7.2e-43 179.9 570 31.6
unitig_578.g16692 Utricularia gibba HOM05D001393 ORTHO05D007477 2.1e-42 178.3 487 32.2
Lalb_Chr19g0140311 Lupinus albus HOM05D001393 ORTHO05D007477 3.3e-40 171.0 638 28.4
Os07g0569000 Oryza sativa ssp. japonica HOM05D001393 ORTHO05D007477 1.8e-38 165.2 433 30.9
Zm00001eb324710 Zea mays HOM05D001393 ORTHO05D007477 1.8e-38 165.2 575 28.0
ATR0332G069 Amborella trichopoda HOM05D001393 ORTHO05D007477 3.1e-38 164.5 457 32.6
Zm00001eb107220 Zea mays HOM05D001393 ORTHO05D007477 2.6e-37 161.4 484 29.3
HPP92_015712 Vanilla planifolia HOM05D001393 ORTHO05D007477 1.9e-35 155.2 504 28.4
HPP92_026649 Vanilla planifolia HOM05D001393 ORTHO05D007477 4.2e-35 154.1 506 28.7
Ah.10g038800 Amaranthus hybridus HOM05D001393 ORTHO05D007477 1.8e-33 148.7 542 29.5
Duzib138G1437 Durio zibethinus HOM05D001393 ORTHO05D007477 3.0e-33 147.9 542 30.6
FAN10G3273 Fragaria x ananassa HOM05D001393 ORTHO05D007477 1.3e-31 142.5 152 47.4
Eucgr.J01288 Eucalyptus grandis HOM05D001393 ORTHO05D007477 8.0e-18 96.7 135 43.7
SEGI_29291 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 1.2e-08 66.2 405 21.5
Dinv43434 Davidia involucrata HOM05D001393 ORTHO05D007477 4.4e-08 64.3 208 30.3
SEGI_04113 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 4.1e-06 57.8 371 21.3
SEGI_08002 Sequoiadendron giganteum HOM05D020720 ORTHO05D007477 4.1e-06 57.8 371 21.3
Pp3c5_15230 Physcomitrium patens HOM05D001393 ORTHO05D007477 7.0e-06 57.0 197 26.4


User provided reference genes

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