Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0250931 Helianthus annuus HOM05D006590 ORTHO05D008427 0.0e+00 1317.8 653 100.0
ECA232G3273 Erigeron canadensis HOM05D006590 ORTHO05D008427 1.9e-308 1062.0 645 82.9
Lsat_1_v5_gn_5_75160 Lactuca sativa HOM05D006590 ORTHO05D008427 5.3e-271 937.6 676 72.9
Actinidia08640 Actinidia chinensis HOM05D006590 ORTHO05D008427 1.6e-264 916.0 649 69.5
CSS0003993 Camellia sinensis var. sinensis HOM05D006590 ORTHO05D008427 1.0e-261 906.7 626 70.8
vmacro06540 Vaccinium macrocarpon HOM05D006590 ORTHO05D008427 6.0e-259 897.5 650 67.8
Rhsim03G0207800 Rhododendron simsii HOM05D006590 ORTHO05D008427 7.9e-259 897.1 652 68.4
Dinv35324 Davidia involucrata HOM05D006590 ORTHO05D008427 6.3e-256 887.5 577 74.2
QL09p009505 Quercus lobata HOM05D006590 ORTHO05D008427 1.8e-255 885.9 653 67.7
Hma1.2p1_0404F.1_g145500 Hydrangea macrophylla HOM05D006590 ORTHO05D008427 4.1e-255 884.8 587 73.4
CiPaw.05G251800 Carya illinoinensis HOM05D006590 ORTHO05D008427 5.3e-255 884.4 606 71.3
GSVIVG01038710001 Vitis vinifera HOM05D006590 ORTHO05D008427 3.8e-253 878.2 650 66.9
Haze_00189 Corylus avellana HOM05D006590 ORTHO05D008427 8.5e-253 877.1 650 67.1
Prupe.2G311400 Prunus persica HOM05D006590 ORTHO05D008427 3.2e-252 875.2 651 67.3
CANSAT21G0035 Cannabis sativa HOM05D006590 ORTHO05D008427 7.9e-251 870.5 662 65.6
Ciclev10004491m.g Citrus clementina HOM05D006590 ORTHO05D008427 1.8e-250 869.4 618 68.9
TWI14G0328 Tripterygium wilfordii HOM05D006590 ORTHO05D008427 1.8e-250 869.4 636 68.9
MD01G1219800 Malus domestica HOM05D006590 ORTHO05D008427 1.1e-249 866.7 614 69.7
Cfa016251 Carpinus fangiana HOM05D006590 ORTHO05D008427 1.5e-249 866.3 653 66.9
Manes.06G159700 Manihot esculenta HOM05D006590 ORTHO05D008427 9.7e-249 863.6 651 66.2
Oeu041046.1 Olea europaea HOM05D006590 ORTHO05D008427 2.2e-248 862.4 642 67.3
FAN10G1373 Fragaria x ananassa HOM05D006590 ORTHO05D008427 2.4e-247 859.0 655 65.6
Sopen03g023190 Solanum pennellii HOM05D006590 ORTHO05D008427 2.4e-247 859.0 621 67.8
FvH4_7g31750 Fragaria vesca HOM05D006590 ORTHO05D008427 5.3e-247 857.8 652 66.3
FAN06G3161 Fragaria x ananassa HOM05D006590 ORTHO05D008427 5.3e-247 857.8 670 65.2
FAN10G2802 Fragaria x ananassa HOM05D006590 ORTHO05D008427 5.3e-247 857.8 655 65.5
Atru.chr1.163 Acer truncatum HOM05D006590 ORTHO05D008427 3.4e-246 855.1 592 69.9
FAN06G3878 Fragaria x ananassa HOM05D006590 ORTHO05D008427 4.5e-246 854.7 670 65.1
Lj1g0007393 Lotus japonicus HOM05D006590 ORTHO05D008427 4.5e-246 854.7 619 68.2
Ca_16698_v3 Cicer arietinum L. HOM05D006590 ORTHO05D008427 7.7e-246 854.0 649 66.4
FAN03G2401 Fragaria x ananassa HOM05D006590 ORTHO05D008427 1.0e-245 853.6 652 65.5
Thecc.03G196200 Theobroma cacao HOM05D006590 ORTHO05D008427 1.3e-245 853.2 653 64.3
arahy.Tifrunner.gnm1.ann1.X012TI Arachis hypogaea HOM05D006590 ORTHO05D008427 2.2e-245 852.4 628 66.7
CAN.G108.67 Capsicum annuum HOM05D006590 ORTHO05D008427 2.2e-245 852.4 625 67.4
Potri.015G017100 Populus trichocarpa HOM05D006590 ORTHO05D008427 2.9e-245 852.0 582 71.6
PGSC0003DMG400009120 Solanum tuberosum HOM05D006590 ORTHO05D008427 2.9e-245 852.0 621 67.5
RcHm_v2.0_Chr1g0380971 Rosa chinensis HOM05D006590 ORTHO05D008427 3.8e-245 851.7 657 64.8
Lalb_Chr08g0240321 Lupinus albus HOM05D006590 ORTHO05D008427 1.4e-244 849.7 649 65.6
PGR042G1173 Punica granatum HOM05D006590 ORTHO05D008427 7.2e-244 847.4 608 68.8
Duzib205G0486 Durio zibethinus HOM05D006590 ORTHO05D008427 1.2e-243 846.7 655 64.7
Medtr3g091290 Medicago truncatula HOM05D006590 ORTHO05D008427 3.6e-243 845.1 648 64.4
Migut.F00225 Erythranthe guttata HOM05D006590 ORTHO05D008427 4.7e-243 844.7 658 62.9
arahy.Tifrunner.gnm1.ann1.ICGL65 Arachis hypogaea HOM05D006590 ORTHO05D008427 6.1e-243 844.3 644 65.5
COL.COLO4_11262 Corchorus olitorius HOM05D006590 ORTHO05D008427 1.0e-242 843.6 678 63.6
Eucgr.A01466 Eucalyptus grandis HOM05D006590 ORTHO05D008427 1.0e-242 843.6 652 64.3
Glyma.06G127700 Glycine max HOM05D006590 ORTHO05D008427 1.0e-242 843.6 648 64.5
DCAR_014541 Daucus carota HOM05D006590 ORTHO05D008427 5.1e-242 841.3 614 67.6
Sc13g0009780 Simmondsia chinensis HOM05D006590 ORTHO05D008427 3.3e-241 838.6 662 64.8
FAN01G1498 Fragaria x ananassa HOM05D006590 ORTHO05D008427 7.4e-241 837.4 666 64.1
Psat5g078080 Pisum sativum HOM05D006590 ORTHO05D008427 9.7e-241 837.0 672 63.1
Gorai.008G269500 Gossypium raimondii HOM05D006590 ORTHO05D008427 3.7e-240 835.1 676 63.8
TPR.G17286 Trifolium pratense HOM05D006590 ORTHO05D008427 3.7e-240 835.1 652 64.4
Gohir.D12G251400 Gossypium hirsutum HOM05D006590 ORTHO05D008427 4.8e-240 834.7 676 63.6
CsaV3_3G027870 Cucumis sativus L. HOM05D006590 ORTHO05D008427 6.3e-240 834.3 656 63.4
MELO3C008489.2 Cucumis melo HOM05D006590 ORTHO05D008427 1.4e-239 833.2 656 63.9
Glyma.04G236600 Glycine max HOM05D006590 ORTHO05D008427 2.4e-239 832.4 649 64.1
Phvul.009G053500 Phaseolus vulgaris HOM05D006590 ORTHO05D008427 3.1e-239 832.0 648 64.7
Gohir.A12G250600 Gossypium hirsutum HOM05D006590 ORTHO05D008427 9.1e-239 830.5 676 63.5
Cc02_g01670 Coffea canephora HOM05D006590 ORTHO05D008427 2.0e-238 829.3 578 68.9
SalBow4G1653 Salvia bowleyana HOM05D006590 ORTHO05D008427 7.7e-238 827.4 643 65.3
THA.LOC104800297 Tarenaya hassleriana HOM05D006590 ORTHO05D008427 2.2e-237 825.9 608 67.3
VMungo1309G0677 Vigna mungo HOM05D006590 ORTHO05D008427 1.1e-236 823.5 601 67.2
Peaxi162Scf00550g00546 Petunia axillaris HOM05D006590 ORTHO05D008427 1.6e-235 819.7 662 63.4
AUR62006110 Chenopodium quinoa HOM05D006590 ORTHO05D008427 2.7e-235 818.9 613 65.7
Aqoxy5G04233 Aquilegia oxysepala HOM05D006590 ORTHO05D008427 6.1e-235 817.8 662 61.6
AUR62019378 Chenopodium quinoa HOM05D006590 ORTHO05D008427 2.3e-234 815.8 652 62.3
Nn1g01869 Nelumbo nucifera HOM05D006590 ORTHO05D008427 3.9e-234 815.1 639 63.8
Sed0010238 Sechium edule HOM05D006590 ORTHO05D008427 5.2e-234 814.7 682 61.3
PSO063G2913 Papaver somniferum HOM05D006590 ORTHO05D008427 1.1e-233 813.5 638 63.3
PSO170G2823 Papaver somniferum HOM05D006590 ORTHO05D008427 4.4e-233 811.6 618 64.7
Nitab4.5_0000714g0140 Nicotiana tabacum HOM05D006590 ORTHO05D008427 1.1e-231 807.0 603 66.3
Carub.0008s1361 Capsella rubella HOM05D006590 ORTHO05D008427 3.5e-230 802.0 612 66.7
AL8G28150 Arabidopsis lyrata HOM05D006590 ORTHO05D008427 1.0e-229 800.4 640 65.2
BraA10t43179Z Brassica rapa HOM05D006590 ORTHO05D008427 2.2e-229 799.3 618 65.9
Sp6g15580 Schrenkiella parvula HOM05D006590 ORTHO05D008427 5.0e-229 798.1 620 65.2
BolC9t57211H Brassica oleracea HOM05D006590 ORTHO05D008427 1.5e-228 796.6 621 65.7
Aa31LG3G9610 Aethionema arabicum HOM05D006590 ORTHO05D008427 3.2e-228 795.4 614 65.1
CARHR266570 Cardamine hirsuta HOM05D006590 ORTHO05D008427 5.5e-228 794.7 632 65.0
Thhalv10012882m.g Eutrema salsugineum HOM05D006590 ORTHO05D008427 1.6e-227 793.1 621 64.7
TAR375G1022 Trochodendron aralioides HOM05D006590 ORTHO05D008427 4.0e-226 788.5 617 64.2
MBI07_g07100_MAGBIO Magnolia biondii HOM05D006590 ORTHO05D008427 1.2e-225 786.9 625 62.7
SGA_v2.0_scaffold44G16790 Striga asiatica HOM05D006590 ORTHO05D008427 3.8e-221 771.9 588 63.9
A10p10910 Brassica napus HOM05D001108 ORTHO05D001619 4.2e-220 768.5 596 65.6
C09p43300 Brassica napus HOM05D001108 ORTHO05D001619 2.3e-218 762.7 599 65.3
HPP92_006416 Vanilla planifolia HOM05D006590 ORTHO05D008427 4.4e-217 758.4 610 62.0
CSS0014515 Camellia sinensis var. sinensis HOM05D006590 ORTHO05D008427 9.8e-217 757.3 489 75.7
EL10Ac3g05300 Beta vulgaris HOM05D006590 ORTHO05D008427 3.5e-214 748.8 589 63.7
Potri.015G016801 Populus trichocarpa HOM05D006590 ORTHO05D008427 3.3e-212 742.3 582 66.5
Os01g0655500 Oryza sativa ssp. japonica HOM05D006590 ORTHO05D008427 1.2e-211 740.3 587 61.5
Nitab4.5_0007081g0010 Nicotiana tabacum HOM05D006590 ORTHO05D008427 2.1e-211 739.6 603 62.2
ATR0602G100 Amborella trichopoda HOM05D006590 ORTHO05D008427 8.0e-211 737.6 604 62.6
BcaB08g35710 Brassica carinata HOM05D006590 ORTHO05D008427 5.4e-207 724.9 614 62.4
Hma1.2p1_0404F.1_g145510 Hydrangea macrophylla HOM05D006590 ORTHO05D008427 1.5e-204 716.8 464 75.0
Solyc03g083420.4 Solanum lycopersicum HOM05D006590 ORTHO05D008427 3.1e-202 709.1 486 70.4
SEGI_37244 Sequoiadendron giganteum HOM05D006590 ORTHO05D008427 2.1e-195 686.4 600 58.8
unitig_899.g15485 Utricularia gibba HOM05D006590 ORTHO05D008427 2.8e-179 632.9 637 52.7
Lj1C1015G5 Lonicera japonica HOM05D006590 ORTHO05D008427 3.4e-177 625.9 652 52.1
Cpa.g.sc3.70 Carica papaya HOM05D006590 ORTHO05D008427 3.8e-176 622.5 623 54.1
Mapoly0022s0163 Marchantia polymorpha HOM05D006590 ORTHO05D008427 4.8e-163 578.9 592 51.4
AT5G53450 Arabidopsis thaliana HOM05D006590 ORTHO05D008427 2.0e-161 573.5 407 71.5
SMO172G0068 Selaginella moellendorffii HOM05D006590 ORTHO05D008427 9.6e-156 554.7 589 50.1
ClCG05G008870 Citrullus lanatus HOM05D006590 ORTHO05D008427 2.8e-155 553.1 418 67.7
Zm00001eb158040 Zea mays HOM05D006590 ORTHO05D008427 5.5e-143 512.3 357 67.8
SalBow4G1387 Salvia bowleyana HOM05D006590 ORTHO05D008427 1.3e-136 491.1 361 64.3
Sabra15G0013100 Salix brachista HOM05D006590 ORTHO05D008427 5.5e-95 352.8 235 77.4
CBR_g39728 Chara braunii HOM05D006590 ORTHO05D008427 6.1e-86 322.8 623 33.1
Actinidia33527 Actinidia chinensis HOM05D006590 ORTHO05D008427 7.1e-74 282.7 335 49.3
Potri.015G016500 Populus trichocarpa HOM05D006590 ORTHO05D008427 9.5e-71 272.3 230 58.3
Potri.015G016600 Populus trichocarpa HOM05D006590 ORTHO05D008427 2.7e-57 227.6 158 70.9
BcaC04g19592 Brassica carinata HOM05D006590 ORTHO05D008427 4.2e-42 177.2 122 71.3
Sabra15G0012800 Salix brachista HOM05D006590 ORTHO05D008427 1.0e-40 172.6 146 58.9
Potri.015G016375 Populus trichocarpa HOM05D006590 ORTHO05D008427 1.8e-40 171.8 144 63.9
Potri.015G016300 Populus trichocarpa HOM05D006590 ORTHO05D008427 2.8e-38 164.5 134 61.9
Hund04856 Selenicereus undatus HOM05D006590 ORTHO05D008427 7.9e-33 146.4 166 53.0
Actinidia34212 Actinidia chinensis HOM05D006590 ORTHO05D008427 5.0e-27 127.1 75 74.7
COL.COLO4_02893 Corchorus olitorius HOM05D006590 ORTHO05D008427 6.1e-25 120.2 61 91.8
CDE10G1176 Ceratophyllum demersum HOM05D006590 ORTHO05D008427 5.5e-18 97.1 58 74.1
Lsat_1_v5_gn_2_64600 Lactuca sativa HOM05D006590 ORTHO05D011991 1.6e-17 95.5 54 75.9
Hma1.2p1_0404F.1_g145520 Hydrangea macrophylla HOM05D006590 ORTHO05D008427 2.0e-15 88.6 60 66.7
Aqoxy2G01300 Aquilegia oxysepala HOM05D006590 ORTHO05D008427 3.2e-10 71.2 47 63.8
Pp3c4_25980 Physcomitrium patens HOM05D002406 ORTHO05D007964 3.9e-08 64.3 268 25.4
CAN.G37.10 Capsicum annuum HOM05D006590 ORTHO05D008427 4.4e-07 60.8 43 67.4
CDE09G1163 Ceratophyllum demersum HOM05D002406 ORTHO05D007964 1.3e-06 59.3 268 22.8
Pp3c26_5140 Physcomitrium patens HOM05D002406 ORTHO05D007964 1.7e-06 58.9 343 24.2
Sabra10G0098600 Salix brachista HOM05D002406 ORTHO05D007964 8.2e-06 56.6 348 21.8


User provided reference genes

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