Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0249771 Helianthus annuus HOM05D002247 ORTHO05D002659 5.2e-44 180.6 90 100.0
HanXRQChr12g0355121 Helianthus annuus HOM05D002247 ORTHO05D002659 1.3e-26 122.9 97 70.1
HanXRQChr16g0509501 Helianthus annuus HOM05D002247 ORTHO05D002659 9.9e-19 96.7 115 50.4
Lsat_1_v5_gn_8_98400 Lactuca sativa HOM05D002247 ORTHO05D002659 8.4e-18 93.6 109 48.6
CSS0012697 Camellia sinensis var. sinensis HOM05D002247 ORTHO05D002659 2.4e-17 92.0 101 54.5
Lsat_1_v5_gn_5_144881 Lactuca sativa HOM05D002247 ORTHO05D002659 9.2e-17 90.1 115 48.7
ECA236G2912 Erigeron canadensis HOM05D002247 ORTHO05D001072 1.7e-15 85.9 98 50.0
MSTRG.10601 Avicennia marina HOM05D002247 ORTHO05D002659 1.5e-14 82.8 108 48.1
Nitab4.5_0000363g0100 Nicotiana tabacum HOM05D002247 ORTHO05D002659 1.5e-14 82.8 112 48.2
Nitab4.5_0003324g0050 Nicotiana tabacum HOM05D002247 ORTHO05D002659 3.3e-14 81.6 116 45.7
vmacro10851 Vaccinium macrocarpon HOM05D002247 ORTHO05D002659 1.6e-13 79.3 109 45.9
Migut.A00183 Erythranthe guttata HOM05D002247 ORTHO05D002659 3.6e-13 78.2 119 42.9
MSTRG.26385 Avicennia marina HOM05D002247 ORTHO05D002659 4.7e-13 77.8 106 49.1
Dinv41668 Davidia involucrata HOM05D001008 ORTHO05D003293 1.8e-12 75.9 91 51.6
SGA_v2.0_scaffold19G08726 Striga asiatica HOM05D002247 ORTHO05D002659 2.4e-12 75.5 109 44.0
Rhsim05G0040000 Rhododendron simsii HOM05D002247 ORTHO05D002659 4.0e-12 74.7 96 47.9
Dinv36685 Davidia involucrata HOM05D002247 ORTHO05D002659 1.5e-11 72.8 112 42.9
Ca_25574_v3 Cicer arietinum L. HOM05D002247 ORTHO05D002659 2.0e-11 72.4 100 42.0
Gohir.A13G186900 Gossypium hirsutum HOM05D002247 ORTHO05D002659 2.0e-11 72.4 121 40.5
CAN.G1323.16 Capsicum annuum HOM05D002247 ORTHO05D002659 3.4e-11 71.6 125 39.2
Actinidia17524 Actinidia chinensis HOM05D002247 ORTHO05D002659 5.8e-11 70.9 105 41.0
DCAR_031997 Daucus carota HOM05D002247 ORTHO05D002659 5.8e-11 70.9 128 37.5
Gohir.D13G193700 Gossypium hirsutum HOM05D002247 ORTHO05D002659 7.6e-11 70.5 122 41.0
Gorai.013G219800 Gossypium raimondii HOM05D002247 ORTHO05D002659 7.6e-11 70.5 122 41.0
Lj7P697T54 Lonicera japonica HOM05D002247 ORTHO05D002659 1.3e-10 69.7 116 38.8
Psat5g240400 Pisum sativum HOM05D002247 ORTHO05D002659 1.3e-10 69.7 99 44.4
TPR.G21384 Trifolium pratense HOM05D002247 ORTHO05D002659 1.3e-10 69.7 100 44.0
AL4G33800 Arabidopsis lyrata HOM05D002247 ORTHO05D002659 2.2e-10 68.9 134 38.8
CARHR132180 Cardamine hirsuta HOM05D002247 ORTHO05D002659 2.9e-10 68.6 136 36.8
Thhalv10008738m.g Eutrema salsugineum HOM05D002247 ORTHO05D002659 2.9e-10 68.6 114 40.4
GSVIVG01015301001 Vitis vinifera HOM05D002247 ORTHO05D002659 2.9e-10 68.6 102 45.1
TAR383G0314 Trochodendron aralioides HOM05D002247 ORTHO05D002659 3.8e-10 68.2 113 39.8
Aa31LG3G15510 Aethionema arabicum HOM05D002247 ORTHO05D002659 4.9e-10 67.8 120 40.8
ECA240G0152 Erigeron canadensis HOM05D002247 ORTHO05D002659 4.9e-10 67.8 124 37.1
CDE02G1551 Ceratophyllum demersum HOM05D002247 ORTHO05D002659 6.4e-10 67.4 116 38.8
SalBow4G1966 Salvia bowleyana HOM05D002247 ORTHO05D002659 6.4e-10 67.4 119 38.7
TPR.G21378 Trifolium pratense HOM05D002247 ORTHO05D002659 8.4e-10 67.0 100 42.0
Carub.0004s1933 Capsella rubella HOM05D002247 ORTHO05D002659 1.1e-09 66.6 132 37.9
COL.COLO4_34742 Corchorus olitorius HOM05D002247 ORTHO05D002659 1.1e-09 66.6 110 40.9
Glyma.01G007700 Glycine max HOM05D002247 ORTHO05D002659 1.4e-09 66.2 97 42.3
Potri.008G176500 Populus trichocarpa HOM05D002247 ORTHO05D002659 1.9e-09 65.9 112 37.5
BolC3t14818H Brassica oleracea HOM05D002247 ORTHO05D002659 2.4e-09 65.5 112 39.3
PSO063G5922 Papaver somniferum HOM05D002247 ORTHO05D002659 2.4e-09 65.5 108 40.7
THA.LOC104811262 Tarenaya hassleriana HOM05D002247 ORTHO05D002659 2.4e-09 65.5 121 38.0
A05p08540 Brassica napus HOM05D002247 ORTHO05D002659 3.2e-09 65.1 123 37.4
Nn6g35330 Nelumbo nucifera HOM05D002247 ORTHO05D002659 3.2e-09 65.1 122 43.4
PSO541G5509 Papaver somniferum HOM05D002247 ORTHO05D002659 3.2e-09 65.1 124 37.9
PSO675G2862 Papaver somniferum HOM05D002247 ORTHO05D002659 3.2e-09 65.1 124 37.9
PSO210G2193 Papaver somniferum HOM05D002247 ORTHO05D002659 4.2e-09 64.7 124 38.7
Rhsim05G0040100 Rhododendron simsii HOM05D002247 ORTHO05D002659 4.2e-09 64.7 95 43.2
BcaC01g05619 Brassica carinata HOM05D002247 ORTHO05D002659 5.4e-09 64.3 112 38.4
CSS0026258 Camellia sinensis var. sinensis HOM05D002247 ORTHO05D002659 5.4e-09 64.3 133 34.6
FAN23G1233 Fragaria x ananassa HOM05D002247 ORTHO05D002659 5.4e-09 64.3 106 41.5
Nn4g24937 Nelumbo nucifera HOM05D002247 ORTHO05D002659 5.4e-09 64.3 130 39.2
C03p24250 Brassica napus HOM05D002247 ORTHO05D002659 7.1e-09 63.9 118 37.3
C04p10620 Brassica napus HOM05D002247 ORTHO05D002659 7.1e-09 63.9 121 37.2
BolC4t22653H Brassica oleracea HOM05D002247 ORTHO05D002659 7.1e-09 63.9 121 37.2
MELO3C015413.2 Cucumis melo HOM05D002247 ORTHO05D002659 7.1e-09 63.9 123 36.6
THA.LOC104811079 Tarenaya hassleriana HOM05D002247 ORTHO05D002659 7.1e-09 63.9 108 41.7
CSS0032590 Camellia sinensis var. sinensis HOM05D002247 ORTHO05D002659 9.3e-09 63.5 133 34.6
unitig_32.g10888 Utricularia gibba HOM05D002247 ORTHO05D002659 9.3e-09 63.5 123 39.8
Dinv23395 Davidia involucrata HOM05D002247 ORTHO05D002659 1.2e-08 63.2 126 35.7
RcHm_v2.0_Chr3g0491401 Rosa chinensis HOM05D002247 ORTHO05D002659 1.2e-08 63.2 110 39.1
SEGI_28118 Sequoiadendron giganteum HOM05D002247 ORTHO05D002659 1.2e-08 63.2 124 37.1
Cc11_g06900 Coffea canephora HOM05D002247 ORTHO05D002659 1.6e-08 62.8 110 36.4
HPP92_011507 Vanilla planifolia HOM05D002247 ORTHO05D002659 1.6e-08 62.8 134 36.6
BcaC07g39032 Brassica carinata HOM05D002247 ORTHO05D002659 2.1e-08 62.4 115 36.5
C08p20110 Brassica napus HOM05D002247 ORTHO05D002659 2.1e-08 62.4 115 36.5
BolC8t49644H Brassica oleracea HOM05D002247 ORTHO05D002659 2.1e-08 62.4 115 36.5
Sabra08G0134400 Salix brachista HOM05D002247 ORTHO05D002659 2.1e-08 62.4 111 36.0
BcaB01g03778 Brassica carinata HOM05D002247 ORTHO05D002659 2.7e-08 62.0 121 36.4
CsaV3_1G039810 Cucumis sativus L. HOM05D002247 ORTHO05D002659 2.7e-08 62.0 123 35.8
Thhalv10017215m.g Eutrema salsugineum HOM05D002247 ORTHO05D002659 2.7e-08 62.0 119 36.1
FAN26G0843 Fragaria x ananassa HOM05D002247 ORTHO05D002659 2.7e-08 62.0 106 38.7
FAN26G0850 Fragaria x ananassa HOM05D002247 ORTHO05D002659 2.7e-08 62.0 106 38.7
Oeu000356.1 Olea europaea HOM05D002247 ORTHO05D002659 2.7e-08 62.0 109 41.3
Sp4g19730 Schrenkiella parvula HOM05D002247 ORTHO05D002659 2.7e-08 62.0 122 36.9
CARHR020820 Cardamine hirsuta HOM05D002247 ORTHO05D002659 3.5e-08 61.6 111 38.7
Glyma.16G078500 Glycine max HOM05D002247 ORTHO05D002659 3.5e-08 61.6 97 40.2
PSO455G0055 Papaver somniferum HOM05D002247 ORTHO05D002659 3.5e-08 61.6 126 37.3
BraA05t19822Z Brassica rapa HOM05D002247 ORTHO05D002659 4.6e-08 61.2 125 36.0
Ciclev10009399m.g Citrus clementina HOM05D002247 ORTHO05D002659 4.6e-08 61.2 123 37.4
FAN19G2665 Fragaria x ananassa HOM05D002247 ORTHO05D002659 4.6e-08 61.2 108 38.9
MBI18_g09645_MAGBIO Magnolia biondii HOM05D002247 ORTHO05D002659 6.0e-08 60.8 124 38.7
MD02G1065800 Malus domestica HOM05D002247 ORTHO05D002659 6.0e-08 60.8 124 37.1
AL1G33180 Arabidopsis lyrata HOM05D002247 ORTHO05D002659 7.8e-08 60.5 124 37.9
Lalb_Chr16g0385041 Lupinus albus HOM05D002247 ORTHO05D002659 7.8e-08 60.5 116 37.1
Phvul.002G095500 Phaseolus vulgaris HOM05D002247 ORTHO05D002659 7.8e-08 60.5 101 40.6
SalBow7G0882 Salvia bowleyana HOM05D002247 ORTHO05D002659 7.8e-08 60.5 121 36.4
THA.LOC104807535 Tarenaya hassleriana HOM05D002247 ORTHO05D002659 7.8e-08 60.5 113 38.9
FvH4_1g06160 Fragaria vesca HOM05D002247 ORTHO05D002659 1.0e-07 60.1 108 38.0
Glyma.20G017300 Glycine max HOM05D002247 ORTHO05D002659 1.0e-07 60.1 110 40.0
Medtr6g088745 Medicago truncatula HOM05D002247 ORTHO05D002659 1.0e-07 60.1 107 43.0
Os07g0604500 Oryza sativa ssp. japonica HOM05D002247 ORTHO05D002659 1.0e-07 60.1 120 39.2
AT1G20350 Arabidopsis thaliana HOM05D002247 ORTHO05D002659 1.3e-07 59.7 115 35.7
A08p29410 Brassica napus HOM05D002247 ORTHO05D002659 1.3e-07 59.7 114 36.8
BraA08t34876Z Brassica rapa HOM05D002247 ORTHO05D002659 1.3e-07 59.7 114 36.8
FAN28G0772 Fragaria x ananassa HOM05D002247 ORTHO05D002659 1.3e-07 59.7 108 38.0
Lj2g0013435 Lotus japonicus HOM05D002247 ORTHO05D002659 1.3e-07 59.7 103 37.9
MBI18_g10391_MAGBIO Magnolia biondii HOM05D002247 ORTHO05D002659 1.3e-07 59.7 123 36.6
MSTRG.11683 Avicennia marina HOM05D002247 ORTHO05D002659 2.3e-07 58.9 128 34.4
CSS0029229 Camellia sinensis var. sinensis HOM05D002247 ORTHO05D002659 2.3e-07 58.9 132 35.6
Sed0018400 Sechium edule HOM05D002247 ORTHO05D002659 2.3e-07 58.9 112 34.8
FvH4_6g25200 Fragaria vesca HOM05D002247 ORTHO05D002659 3.0e-07 58.5 103 36.9
TPR.G360 Trifolium pratense HOM05D002247 ORTHO05D002659 3.0e-07 58.5 97 38.1
FAN14G0570 Fragaria x ananassa HOM05D002247 ORTHO05D002659 3.9e-07 58.2 105 37.1
FvH4_6g21710 Fragaria vesca HOM05D002247 ORTHO05D035432 5.1e-07 57.8 106 36.8
BcaB03g12869 Brassica carinata HOM05D002247 ORTHO05D002659 6.6e-07 57.4 114 36.0
Ca_18743_v3 Cicer arietinum L. HOM05D002247 ORTHO05D002659 6.6e-07 57.4 113 37.2
Ca_29574_v3 Cicer arietinum L. HOM05D002247 ORTHO05D002659 6.6e-07 57.4 113 37.2
MD15G1196700 Malus domestica HOM05D002247 ORTHO05D002659 6.6e-07 57.4 125 35.2
RcHm_v2.0_Chr2g0091921 Rosa chinensis HOM05D002247 ORTHO05D002659 8.7e-07 57.0 104 39.4
AT2G37410 Arabidopsis thaliana HOM05D002247 ORTHO05D002659 1.1e-06 56.6 140 31.4
FAN02G3639 Fragaria x ananassa HOM05D002247 ORTHO05D002659 1.1e-06 56.6 104 35.6
FAN09G0772 Fragaria x ananassa HOM05D002247 ORTHO05D002659 1.1e-06 56.6 104 36.5
ECA234G1215 Erigeron canadensis HOM05D002247 ORTHO05D002659 1.5e-06 56.2 96 38.5
Lj7A666T75 Lonicera japonica HOM05D002247 ORTHO05D002659 1.5e-06 56.2 115 38.3
Prupe.4G283200 Prunus persica HOM05D002247 ORTHO05D002659 1.9e-06 55.8 123 32.5
Cfa003180 Carpinus fangiana HOM05D002247 ORTHO05D002659 3.3e-06 55.1 121 34.7
Peaxi162Scf00720g00045 Petunia axillaris HOM05D002247 ORTHO05D002659 4.3e-06 54.7 107 36.4
Actinidia39783 Actinidia chinensis HOM05D002247 ORTHO05D002659 7.3e-06 53.9 107 34.6
QL02p041557 Quercus lobata HOM05D002247 ORTHO05D002659 7.3e-06 53.9 114 34.2
Migut.K00543 Erythranthe guttata HOM05D002247 ORTHO05D002659 9.6e-06 53.5 103 37.9


User provided reference genes

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