Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0246531 Helianthus annuus HOM05D014857 ORTHO05D015078 7.0e-265 916.8 476 100.0
ECA246G3041 Erigeron canadensis HOM05D003265 ORTHO05D003819 2.7e-91 340.1 554 44.9
Lsat_1_v5_gn_9_68001 Lactuca sativa HOM05D014857 ORTHO05D015078 7.7e-62 242.3 551 39.7
ECA246G0591 Erigeron canadensis HOM05D014857 ORTHO05D015078 3.6e-43 180.3 516 34.3
Dinv04678 Davidia involucrata HOM05D003265 ORTHO05D003819 1.6e-30 138.3 496 32.1
Lj1A924T53 Lonicera japonica HOM05D003265 ORTHO05D003819 9.8e-25 119.0 413 32.2
DCAR_015272 Daucus carota HOM05D003265 ORTHO05D015078 3.2e-23 114.0 464 31.7
Actinidia38248 Actinidia chinensis HOM05D003265 ORTHO05D003819 1.7e-21 108.2 500 30.0
CSS0002755 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 3.6e-19 100.5 601 26.1
Sopen06g001640 Solanum pennellii HOM05D014857 ORTHO05D015078 6.2e-19 99.8 461 28.9
TAR633G0548 Trochodendron aralioides HOM05D003265 ORTHO05D003819 1.2e-17 95.5 528 27.8
Solyc06g005660.3 Solanum lycopersicum HOM05D014857 ORTHO05D015078 1.7e-16 91.7 462 28.1
TAR623G0684 Trochodendron aralioides HOM05D003265 ORTHO05D003819 1.7e-16 91.7 511 28.4
vmacro07090 Vaccinium macrocarpon HOM05D003265 ORTHO05D003819 2.2e-16 91.3 487 27.7
Nn2g12994 Nelumbo nucifera HOM05D003265 ORTHO05D003819 8.3e-16 89.4 504 26.6
FAN03G0618 Fragaria x ananassa HOM05D003265 ORTHO05D003819 2.4e-15 87.8 503 27.8
Prupe.2G219100 Prunus persica HOM05D003265 ORTHO05D003819 2.4e-15 87.8 447 29.3
PGSC0003DMG400002154 Solanum tuberosum HOM05D014857 ORTHO05D015078 3.2e-15 87.4 123 41.5
Nn2g10657 Nelumbo nucifera HOM05D003265 ORTHO05D003819 1.0e-13 82.4 571 28.0
CSS0013290 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 6.6e-13 79.7 508 25.2
FAN10G1642 Fragaria x ananassa HOM05D003265 ORTHO05D003819 8.6e-13 79.3 487 27.7
CSS0006813 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 1.1e-12 79.0 483 26.9
FvH4_7g20180 Fragaria vesca HOM05D003265 ORTHO05D003819 3.3e-12 77.4 429 28.7
MD07G1179700 Malus domestica HOM05D003265 ORTHO05D003819 2.8e-11 74.3 428 28.0
CSS0020316 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 3.6e-11 73.9 469 27.3
Rhsim03G0122700 Rhododendron simsii HOM05D003265 ORTHO05D003819 1.1e-10 72.4 393 27.2
COL.COLO4_23753 Corchorus olitorius HOM05D003265 ORTHO05D003819 5.2e-10 70.1 386 28.2
TWI63G0250 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 8.9e-10 69.3 372 28.8
Dinv37252 Davidia involucrata HOM05D003265 ORTHO05D003819 1.5e-09 68.6 430 28.6
Manes.10G042100 Manihot esculenta HOM05D003265 ORTHO05D003819 1.5e-09 68.6 409 29.1
QL08p056892 Quercus lobata HOM05D003265 ORTHO05D003819 5.8e-09 66.6 516 27.7
ClCG09G020420 Citrullus lanatus HOM05D003265 ORTHO05D003819 2.2e-08 64.7 494 26.5
Lalb_Chr20g0112961 Lupinus albus HOM05D003265 ORTHO05D003819 2.2e-08 64.7 592 25.2
CDE07G1131 Ceratophyllum demersum HOM05D003265 ORTHO05D003819 2.9e-08 64.3 444 27.3
Cpa.g.sc53.18 Carica papaya HOM05D003265 ORTHO05D003819 3.8e-08 63.9 377 27.1
Thecc.10G067600 Theobroma cacao HOM05D003265 ORTHO05D003819 3.8e-08 63.9 468 26.9
CSS0011554 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 6.4e-08 63.2 58 56.9
Peaxi162Scf00122g00211 Petunia axillaris HOM05D014857 ORTHO05D015078 6.4e-08 63.2 407 26.5
Actinidia05271 Actinidia chinensis HOM05D003265 ORTHO05D003819 8.4e-08 62.8 229 34.1
Cfa017508 Carpinus fangiana HOM05D003265 ORTHO05D003819 8.4e-08 62.8 442 28.7
Sed0014651 Sechium edule HOM05D003265 ORTHO05D003819 8.4e-08 62.8 510 25.1
GSVIVG01016342001 Vitis vinifera HOM05D003265 ORTHO05D003819 1.1e-07 62.4 439 26.0
Psat3g044800 Pisum sativum HOM05D003265 ORTHO05D003819 2.4e-07 61.2 477 27.3
QL07p045275 Quercus lobata HOM05D003265 ORTHO05D003819 3.2e-07 60.8 467 27.2
Cfa001593 Carpinus fangiana HOM05D003265 ORTHO05D003819 5.4e-07 60.1 474 27.8
Nitab4.5_0000880g0010 Nicotiana tabacum HOM05D014857 ORTHO05D015078 7.1e-07 59.7 421 25.9
Cc09_g02720 Coffea canephora HOM05D014857 ORTHO05D015078 9.2e-07 59.3 517 25.7
Gohir.A13G021500 Gossypium hirsutum HOM05D003265 ORTHO05D003819 9.2e-07 59.3 477 25.4
AUR62043638 Chenopodium quinoa HOM05D030307 ORTHO05D026528 1.2e-06 58.9 475 25.7
Gohir.D13G022100 Gossypium hirsutum HOM05D003265 ORTHO05D003819 1.2e-06 58.9 477 24.9
Lj1g0005050 Lotus japonicus HOM05D003265 ORTHO05D003819 1.2e-06 58.9 77 49.4
CsaV3_3G035550 Cucumis sativus L. HOM05D003265 ORTHO05D003819 1.6e-06 58.5 479 25.9
CSS0047156 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 2.1e-06 58.2 55 58.2
MELO3C025500.2 Cucumis melo HOM05D003265 ORTHO05D003819 2.1e-06 58.2 522 24.5
Gorai.013G024900 Gossypium raimondii HOM05D003265 ORTHO05D003819 2.7e-06 57.8 414 26.1
Nitab4.5_0000272g0020 Nicotiana tabacum HOM05D014857 ORTHO05D015078 2.7e-06 57.8 378 26.2
ClCG10G020560 Citrullus lanatus HOM05D003265 ORTHO05D003819 3.5e-06 57.4 480 26.7
FAN06G2521 Fragaria x ananassa HOM05D003265 ORTHO05D003819 3.5e-06 57.4 422 25.8
FAN06G4411 Fragaria x ananassa HOM05D000122 ORTHO05D003819 7.8e-06 56.2 87 43.7
Lsat_1_v5_gn_1_53881 Lactuca sativa HOM05D003265 ORTHO05D003819 7.8e-06 56.2 381 31.2


User provided reference genes

Program Settings