Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0246151 Helianthus annuus HOM05D003640 ORTHO05D016146 7.2e-30 133.3 68 100.0
HanXRQChr15g0485391 Helianthus annuus HOM05D003640 ORTHO05D004439 1.3e-10 69.3 42 81.0
GSVIVG01038625001 Vitis vinifera HOM05D003640 ORTHO05D004439 2.2e-10 68.6 47 74.5
BcaB01g04251 Brassica carinata HOM05D003640 ORTHO05D004439 2.8e-10 68.2 47 74.5
A03p15040 Brassica napus HOM05D003640 ORTHO05D004439 2.8e-10 68.2 47 74.5
C03p17530 Brassica napus HOM05D003640 ORTHO05D004439 2.8e-10 68.2 47 74.5
BolC3t14166H Brassica oleracea HOM05D003640 ORTHO05D004439 2.8e-10 68.2 47 74.5
BraA03t10798Z Brassica rapa HOM05D003640 ORTHO05D004439 2.8e-10 68.2 47 74.5
Cc02_g00960 Coffea canephora HOM05D003640 ORTHO05D004439 2.8e-10 68.2 42 78.6
HanXRQChr05g0139301 Helianthus annuus HOM05D003640 ORTHO05D004439 2.8e-10 68.2 47 72.3
MSTRG.26989 Avicennia marina HOM05D003640 ORTHO05D004439 3.7e-10 67.8 42 78.6
HanXRQChr11g0343691 Helianthus annuus HOM05D000954 ORTHO05D016146 3.7e-10 67.8 33 97.0
Lsat_1_v5_gn_9_50181 Lactuca sativa HOM05D003640 ORTHO05D004439 3.7e-10 67.8 42 78.6
Lsat_1_v5_gn_9_50221 Lactuca sativa HOM05D003640 ORTHO05D004439 3.7e-10 67.8 42 78.6
BcaB05g22060 Brassica carinata HOM05D003640 ORTHO05D004439 4.8e-10 67.4 39 84.6
Carub.0008s1397 Capsella rubella HOM05D003640 ORTHO05D004439 4.8e-10 67.4 39 84.6
Duzib084G0116 Durio zibethinus HOM05D003640 ORTHO05D004439 4.8e-10 67.4 66 62.1
Thhalv10012857m.g Eutrema salsugineum HOM05D003640 ORTHO05D004439 4.8e-10 67.4 39 84.6
BcaB01g04247 Brassica carinata HOM05D003640 ORTHO05D004439 6.3e-10 67.0 33 93.9
BcaC01g06262 Brassica carinata HOM05D003640 ORTHO05D004439 6.3e-10 67.0 33 93.9
Dinv29226 Davidia involucrata HOM05D003640 ORTHO05D004439 1.1e-09 66.2 47 70.2
Gohir.A08G103800 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.1e-09 66.2 66 60.6
Sp6g15750 Schrenkiella parvula HOM05D003640 ORTHO05D004439 1.1e-09 66.2 39 82.1
MSTRG.8618 Avicennia marina HOM05D003640 ORTHO05D004439 1.4e-09 65.9 39 79.5
ClCG01G000140 Citrullus lanatus HOM05D003640 ORTHO05D004439 1.4e-09 65.9 66 57.6
AL8G28460 Arabidopsis lyrata HOM05D003640 ORTHO05D004439 1.8e-09 65.5 39 84.6
MELO3C005925.2 Cucumis melo HOM05D003640 ORTHO05D004439 1.8e-09 65.5 66 57.6
CsaV3_5G000020 Cucumis sativus L. HOM05D003640 ORTHO05D004439 1.8e-09 65.5 66 57.6
Gohir.D09G181300 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.8e-09 65.5 66 60.6
Aa31sc289G20 Aethionema arabicum HOM05D003640 ORTHO05D004439 2.4e-09 65.1 47 70.2
CSS0041088 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 2.4e-09 65.1 47 70.2
Haze_00277 Corylus avellana HOM05D003640 ORTHO05D004439 2.4e-09 65.1 47 72.3
Gorai.006G203300 Gossypium raimondii HOM05D003640 ORTHO05D004439 2.4e-09 65.1 66 60.6
Sp6g15760 Schrenkiella parvula HOM05D003640 ORTHO05D004439 2.4e-09 65.1 39 82.1
Actinidia08687 Actinidia chinensis HOM05D003640 ORTHO05D004439 3.1e-09 64.7 47 68.1
CARHR266770 Cardamine hirsuta HOM05D003640 ORTHO05D004439 3.1e-09 64.7 47 72.3
Gohir.D08G115200 Gossypium hirsutum HOM05D003640 ORTHO05D004439 3.1e-09 64.7 69 59.4
Gorai.004G124100 Gossypium raimondii HOM05D003640 ORTHO05D004439 3.1e-09 64.7 69 59.4
Thecc.03G206700 Theobroma cacao HOM05D003640 ORTHO05D004439 3.1e-09 64.7 66 60.6
TWI39G1295 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 3.1e-09 64.7 65 56.9
Sed0021595 Sechium edule HOM05D003640 ORTHO05D004439 4.1e-09 64.3 66 57.6
Actinidia34257 Actinidia chinensis HOM05D003640 ORTHO05D004439 5.4e-09 63.9 47 68.1
AT5G53620 Arabidopsis thaliana HOM05D003640 ORTHO05D004439 5.4e-09 63.9 39 82.1
C09p43570 Brassica napus HOM05D003640 ORTHO05D004439 5.4e-09 63.9 50 68.0
BolC9t57241H Brassica oleracea HOM05D003640 ORTHO05D004439 5.4e-09 63.9 50 68.0
Carub.0008s1383 Capsella rubella HOM05D003640 ORTHO05D004439 5.4e-09 63.9 39 82.1
CARHR266800 Cardamine hirsuta HOM05D003640 ORTHO05D004439 5.4e-09 63.9 47 72.3
Cpa.g.sc3.144 Carica papaya HOM05D003640 ORTHO05D004439 5.4e-09 63.9 47 68.1
Sc19g0000670 Simmondsia chinensis HOM05D003640 ORTHO05D004439 5.4e-09 63.9 39 84.6
Nn3g18833 Nelumbo nucifera HOM05D003640 ORTHO05D004439 7.0e-09 63.5 47 68.1
SalBow6G0961 Salvia bowleyana HOM05D003640 ORTHO05D004439 7.0e-09 63.5 42 71.4
TAR629G0154 Trochodendron aralioides HOM05D003640 ORTHO05D004439 7.0e-09 63.5 47 68.1
CSS0045837 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 9.1e-09 63.2 47 68.1
CiPaw.05G202900 Carya illinoinensis HOM05D003640 ORTHO05D004439 9.1e-09 63.2 65 56.9
Dinv35374 Davidia involucrata HOM05D003640 ORTHO05D004439 9.1e-09 63.2 47 66.0
MBI12_g23004_MAGBIO Magnolia biondii HOM05D003640 ORTHO05D004439 9.1e-09 63.2 39 76.9
Sabra15G0004700 Salix brachista HOM05D003640 ORTHO05D004439 9.1e-09 63.2 72 54.2
MSTRG.8540 Avicennia marina HOM05D003640 ORTHO05D004439 1.2e-08 62.8 42 71.4
ECA232G0587 Erigeron canadensis HOM05D003640 ORTHO05D004439 1.2e-08 62.8 66 53.0
Potri.015G006700 Populus trichocarpa HOM05D003640 ORTHO05D004439 1.2e-08 62.8 72 52.8
Sed0000635 Sechium edule HOM05D003640 ORTHO05D004439 1.2e-08 62.8 66 54.5
COL.COLO4_14351 Corchorus olitorius HOM05D003640 ORTHO05D004439 1.6e-08 62.4 33 87.9
Duzib068G1167 Durio zibethinus HOM05D003640 ORTHO05D004439 1.6e-08 62.4 66 59.1
Migut.F00997 Erythranthe guttata HOM05D003640 ORTHO05D004439 1.6e-08 62.4 72 48.6
Nn1g00405 Nelumbo nucifera HOM05D003640 ORTHO05D004439 1.6e-08 62.4 47 66.0
Oeu037965.1 Olea europaea HOM05D003640 ORTHO05D004439 1.6e-08 62.4 42 73.8
QL09p007399 Quercus lobata HOM05D003640 ORTHO05D004439 1.6e-08 62.4 72 51.4
QL09p007408 Quercus lobata HOM05D003640 ORTHO05D004439 1.6e-08 62.4 72 51.4
QL93p0214_0013 Quercus lobata HOM05D003640 ORTHO05D004439 1.6e-08 62.4 72 51.4
QL93p0214_0021 Quercus lobata HOM05D003640 ORTHO05D004439 1.6e-08 62.4 72 51.4
Duzib205G1657 Durio zibethinus HOM05D003640 ORTHO05D004439 2.0e-08 62.0 39 79.5
ATR0580G072 Amborella trichopoda HOM05D003640 ORTHO05D004439 2.7e-08 61.6 66 56.1
THA.LOC104825162 Tarenaya hassleriana HOM05D003640 ORTHO05D004439 2.7e-08 61.6 72 52.8
Aqoxy7G00014 Aquilegia oxysepala HOM05D003640 ORTHO05D004439 4.5e-08 60.8 47 63.8
CiPaw.06G042300 Carya illinoinensis HOM05D003640 ORTHO05D004439 4.5e-08 60.8 66 54.5
Gohir.D12G247700 Gossypium hirsutum HOM05D003640 ORTHO05D004439 4.5e-08 60.8 72 52.8
TAR375G0550 Trochodendron aralioides HOM05D003640 ORTHO05D004439 4.5e-08 60.8 33 81.8
SHI02298 Sapria himalayana HOM05D003640 ORTHO05D004439 5.9e-08 60.5 47 68.1
SGA_v2.0_scaffold136G35055 Striga asiatica HOM05D003640 ORTHO05D004439 5.9e-08 60.5 71 49.3
SGA_v2.0_scaffold565G52945 Striga asiatica HOM05D003640 ORTHO05D004439 5.9e-08 60.5 42 69.0
Gohir.A09G186400 Gossypium hirsutum HOM05D003640 ORTHO05D004439 7.7e-08 60.1 33 87.9
Potri.012G023200 Populus trichocarpa HOM05D003640 ORTHO05D004439 7.7e-08 60.1 72 51.4
SalBow2G2490 Salvia bowleyana HOM05D003640 ORTHO05D004439 7.7e-08 60.1 71 50.7
TWI23G0563 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 7.7e-08 60.1 72 50.0
Actinidia28276 Actinidia chinensis HOM05D003640 ORTHO05D004439 1.0e-07 59.7 47 63.8
Gorai.008G265800 Gossypium raimondii HOM05D003640 ORTHO05D004439 1.3e-07 59.3 66 54.5
DCAR_008967 Daucus carota HOM05D003640 ORTHO05D004439 1.7e-07 58.9 66 45.5
PSO063G3729 Papaver somniferum HOM05D003640 ORTHO05D004439 1.7e-07 58.9 33 75.8
vmacro06427 Vaccinium macrocarpon HOM05D003640 ORTHO05D004439 1.7e-07 58.9 34 85.3
Oeu055180.3 Olea europaea HOM05D003640 ORTHO05D004439 2.3e-07 58.5 68 51.5
Glyma.04G230800 Glycine max HOM05D003640 ORTHO05D004439 3.8e-07 57.8 77 49.4
Glyma.06G134300 Glycine max HOM05D003640 ORTHO05D004439 3.8e-07 57.8 77 49.4
Sabra12G0010700 Salix brachista HOM05D003640 ORTHO05D004439 3.8e-07 57.8 33 75.8
TAR636G3562 Trochodendron aralioides HOM05D003640 ORTHO05D004439 3.8e-07 57.8 47 63.8
Gohir.A12G247000 Gossypium hirsutum HOM05D003640 ORTHO05D004439 6.6e-07 57.0 66 53.0
Ca_16756_v3 Cicer arietinum L. HOM05D003640 ORTHO05D004439 1.1e-06 56.2 77 49.4
Rhsim03G0214000 Rhododendron simsii HOM05D003640 ORTHO05D004439 1.5e-06 55.8 66 54.5
AUR62006022 Chenopodium quinoa HOM05D003640 ORTHO05D004439 2.5e-06 55.1 47 66.0
DCAR_020359 Daucus carota HOM05D003640 ORTHO05D004439 2.5e-06 55.1 69 43.5
Lalb_Chr08g0239801 Lupinus albus HOM05D003640 ORTHO05D004439 2.5e-06 55.1 76 47.4
arahy.Tifrunner.gnm1.ann1.1EDB5Y Arachis hypogaea HOM05D003640 ORTHO05D004439 3.3e-06 54.7 77 48.1
arahy.Tifrunner.gnm1.ann1.BT3HV7 Arachis hypogaea HOM05D003640 ORTHO05D004439 3.3e-06 54.7 77 48.1
Atru.chr12.2367 Acer truncatum HOM05D003640 ORTHO05D004439 4.2e-06 54.3 63 52.4
Lsat_1_v5_gn_2_36480 Lactuca sativa HOM05D001657 ORTHO05D001557 5.5e-06 53.9 34 76.5
Medtr3g092250 Medicago truncatula HOM05D003640 ORTHO05D004439 5.5e-06 53.9 77 48.1
Phvul.009G050200 Phaseolus vulgaris HOM05D003640 ORTHO05D004439 5.5e-06 53.9 76 47.4
Hund09700 Selenicereus undatus HOM05D003640 ORTHO05D004439 5.5e-06 53.9 47 63.8
unitig_92.g28243 Utricularia gibba HOM05D003640 ORTHO05D004439 5.5e-06 53.9 42 64.3
VMungo1309G3003 Vigna mungo HOM05D003640 ORTHO05D004439 5.5e-06 53.9 76 47.4
AUR62035604 Chenopodium quinoa HOM05D003640 ORTHO05D004439 7.2e-06 53.5 47 63.8
Lj1g0027227 Lotus japonicus HOM05D003640 ORTHO05D004439 7.2e-06 53.5 77 48.1
Hund21040 Selenicereus undatus HOM05D003640 ORTHO05D004439 7.2e-06 53.5 44 65.9
Lalb_Chr11g0067271 Lupinus albus HOM05D003640 ORTHO05D004439 9.5e-06 53.1 77 45.5
Psat0s2807g0080 Pisum sativum HOM05D003640 ORTHO05D004439 9.5e-06 53.1 47 59.6


User provided reference genes

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