Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0245641 Helianthus annuus HOM05D006742 ORTHO05D008755 5.4e-223 777.3 384 100.0
HanXRQChr16g0519781 Helianthus annuus HOM05D006742 ORTHO05D008755 3.1e-93 346.3 364 52.5
Lsat_1_v5_gn_4_45120 Lactuca sativa HOM05D006742 ORTHO05D008755 2.4e-82 310.1 357 47.6
Lsat_1_v5_gn_4_45700 Lactuca sativa HOM05D006742 ORTHO05D008755 4.3e-79 299.3 350 46.9
Lsat_1_v5_gn_4_45300 Lactuca sativa HOM05D006742 ORTHO05D008755 1.2e-76 291.2 361 44.3
Lsat_1_v5_gn_4_45581 Lactuca sativa HOM05D006742 ORTHO05D008755 3.2e-74 283.1 348 44.5
Lsat_1_v5_gn_4_45140 Lactuca sativa HOM05D006742 ORTHO05D008755 9.2e-74 281.6 362 44.5
Lsat_1_v5_gn_5_77921 Lactuca sativa HOM05D006742 ORTHO05D008755 3.5e-73 279.6 360 43.9
Lsat_1_v5_gn_7_41520 Lactuca sativa HOM05D006742 ORTHO05D008755 6.0e-73 278.9 360 43.9
HanXRQChr16g0519811 Helianthus annuus HOM05D006742 ORTHO05D008755 1.9e-71 273.9 335 46.6
Lsat_1_v5_gn_7_41760 Lactuca sativa HOM05D006742 ORTHO05D008755 5.6e-71 272.3 361 43.5
Lsat_1_v5_gn_4_42761 Lactuca sativa HOM05D006742 ORTHO05D008755 1.2e-70 271.2 360 44.2
Lsat_1_v5_gn_4_45220 Lactuca sativa HOM05D006742 ORTHO05D008755 2.1e-70 270.4 370 43.5
Lsat_1_v5_gn_7_41620 Lactuca sativa HOM05D006742 ORTHO05D008755 3.6e-70 269.6 361 43.2
Lsat_1_v5_gn_7_28681 Lactuca sativa HOM05D006742 ORTHO05D008755 8.1e-70 268.5 325 44.0
Lsat_1_v5_gn_4_44980 Lactuca sativa HOM05D006742 ORTHO05D008755 1.1e-69 268.1 340 45.6
Lsat_1_v5_gn_5_77781 Lactuca sativa HOM05D006742 ORTHO05D008755 1.4e-69 267.7 352 43.2
Lsat_1_v5_gn_4_45260 Lactuca sativa HOM05D006742 ORTHO05D008755 7.6e-68 261.9 351 43.3
Lsat_1_v5_gn_7_41720 Lactuca sativa HOM05D006742 ORTHO05D008755 1.7e-67 260.8 368 41.0
Lsat_1_v5_gn_4_43641 Lactuca sativa HOM05D006742 ORTHO05D008755 6.4e-67 258.8 361 42.7
Lsat_1_v5_gn_7_60861 Lactuca sativa HOM05D006742 ORTHO05D008755 8.4e-67 258.5 359 44.0
Lsat_1_v5_gn_7_8000 Lactuca sativa HOM05D006742 ORTHO05D008755 1.6e-65 254.2 342 43.3
Lsat_1_v5_gn_7_97001 Lactuca sativa HOM05D006742 ORTHO05D008755 3.5e-65 253.1 355 44.5
HanXRQChr16g0520091 Helianthus annuus HOM05D006742 ORTHO05D008755 1.0e-64 251.5 341 41.9
Lsat_1_v5_gn_4_42841 Lactuca sativa HOM05D006742 ORTHO05D008755 1.0e-64 251.5 369 39.6
Lsat_1_v5_gn_4_43561 Lactuca sativa HOM05D006742 ORTHO05D008755 1.3e-64 251.1 357 43.1
Lsat_1_v5_gn_4_45640 Lactuca sativa HOM05D006742 ORTHO05D008755 1.3e-64 251.1 350 42.3
HanXRQChr16g0520101 Helianthus annuus HOM05D006742 ORTHO05D008755 1.7e-64 250.8 341 41.9
Lsat_1_v5_gn_4_42821 Lactuca sativa HOM05D006742 ORTHO05D008755 1.7e-64 250.8 361 40.4
HanXRQChr16g0520041 Helianthus annuus HOM05D006742 ORTHO05D008755 3.0e-64 250.0 341 41.6
Lsat_1_v5_gn_4_41121 Lactuca sativa HOM05D006742 ORTHO05D008755 3.0e-64 250.0 349 44.4
Lsat_1_v5_gn_7_41940 Lactuca sativa HOM05D006742 ORTHO05D008755 3.0e-64 250.0 355 41.7
Lsat_1_v5_gn_7_41660 Lactuca sativa HOM05D006742 ORTHO05D008755 6.6e-64 248.8 339 41.0
Lsat_1_v5_gn_7_41541 Lactuca sativa HOM05D006742 ORTHO05D008755 8.7e-64 248.4 330 42.7
Lsat_1_v5_gn_4_180081 Lactuca sativa HOM05D006742 ORTHO05D008755 1.9e-63 247.3 352 42.0
Lsat_1_v5_gn_7_96981 Lactuca sativa HOM05D006742 ORTHO05D008755 1.6e-62 244.2 326 44.5
Lsat_1_v5_gn_5_78081 Lactuca sativa HOM05D006742 ORTHO05D008755 2.8e-62 243.4 316 44.9
Lsat_1_v5_gn_4_41141 Lactuca sativa HOM05D006742 ORTHO05D008755 3.6e-62 243.0 347 40.9
HanXRQChr16g0519851 Helianthus annuus HOM05D006742 ORTHO05D008755 6.2e-62 242.3 347 42.7
Lsat_1_v5_gn_4_41101 Lactuca sativa HOM05D006742 ORTHO05D008755 2.6e-60 236.9 354 42.9
Lsat_1_v5_gn_7_8020 Lactuca sativa HOM05D006742 ORTHO05D008755 5.8e-60 235.7 360 43.1
Lsat_1_v5_gn_2_25900 Lactuca sativa HOM05D006742 ORTHO05D008755 1.1e-58 231.5 333 40.2
Lsat_1_v5_gn_7_98060 Lactuca sativa HOM05D006742 ORTHO05D008755 1.1e-58 231.5 336 44.0
Lsat_1_v5_gn_5_78141 Lactuca sativa HOM05D006742 ORTHO05D008755 2.7e-57 226.9 304 43.8
Lsat_1_v5_gn_2_26520 Lactuca sativa HOM05D006742 ORTHO05D008755 4.6e-57 226.1 343 41.7
Lsat_1_v5_gn_7_97461 Lactuca sativa HOM05D006742 ORTHO05D008755 6.0e-57 225.7 339 44.0
Lsat_1_v5_gn_4_40061 Lactuca sativa HOM05D006742 ORTHO05D008755 7.9e-57 225.3 357 40.1
Lsat_1_v5_gn_5_74540 Lactuca sativa HOM05D006742 ORTHO05D008755 1.3e-56 224.6 291 44.7
Lsat_1_v5_gn_4_42801 Lactuca sativa HOM05D006742 ORTHO05D008755 3.0e-56 223.4 300 45.0
Lsat_1_v5_gn_2_25961 Lactuca sativa HOM05D006742 ORTHO05D008755 3.9e-56 223.0 351 41.0
Lsat_1_v5_gn_7_7980 Lactuca sativa HOM05D006742 ORTHO05D008755 3.9e-56 223.0 345 43.2
Lsat_1_v5_gn_4_40101 Lactuca sativa HOM05D006742 ORTHO05D008755 5.1e-56 222.6 357 39.5
Lsat_1_v5_gn_4_44960 Lactuca sativa HOM05D006742 ORTHO05D008755 6.7e-56 222.2 322 41.9
Lsat_1_v5_gn_2_26061 Lactuca sativa HOM05D006742 ORTHO05D008755 1.9e-55 220.7 360 42.2
Lsat_1_v5_gn_7_98080 Lactuca sativa HOM05D006742 ORTHO05D008755 2.8e-54 216.9 350 40.6
Lsat_1_v5_gn_5_74560 Lactuca sativa HOM05D006742 ORTHO05D008755 6.2e-54 215.7 316 42.1
Lsat_1_v5_gn_2_26361 Lactuca sativa HOM05D006742 ORTHO05D008755 8.1e-54 215.3 375 39.2
Lsat_1_v5_gn_5_69760 Lactuca sativa HOM05D000451 ORTHO05D000351 5.3e-53 212.6 319 41.7
Lsat_1_v5_gn_2_26181 Lactuca sativa HOM05D006742 ORTHO05D008755 1.5e-52 211.1 358 40.5
Lsat_1_v5_gn_7_41680 Lactuca sativa HOM05D006742 ORTHO05D008755 3.4e-52 209.9 296 41.6
Lsat_1_v5_gn_6_15581 Lactuca sativa HOM05D006742 ORTHO05D008755 6.0e-49 199.1 325 37.5
Lsat_1_v5_gn_4_45320 Lactuca sativa HOM05D006742 ORTHO05D008755 1.3e-48 198.0 235 46.8
Lsat_1_v5_gn_2_26121 Lactuca sativa HOM05D006742 ORTHO05D008755 8.7e-48 195.3 352 40.3
Lsat_1_v5_gn_2_26041 Lactuca sativa HOM05D006742 ORTHO05D008755 6.9e-45 185.7 349 40.1
Lsat_1_v5_gn_2_26101 Lactuca sativa HOM05D006742 ORTHO05D008755 1.2e-44 184.9 356 37.9
Lsat_1_v5_gn_2_25941 Lactuca sativa HOM05D006742 ORTHO05D008755 4.5e-44 183.0 329 40.7
Lsat_1_v5_gn_7_97640 Lactuca sativa HOM05D006742 ORTHO05D008755 2.9e-43 180.3 314 41.7
Lsat_1_v5_gn_4_43681 Lactuca sativa HOM05D006742 ORTHO05D008755 1.9e-42 177.6 204 47.1
Lsat_1_v5_gn_2_26421 Lactuca sativa HOM05D006742 ORTHO05D008755 1.2e-36 158.3 377 31.8
Actinidia05928 Actinidia chinensis HOM05D006742 ORTHO05D008755 8.7e-32 142.1 304 32.2
Lsat_1_v5_gn_7_16060 Lactuca sativa HOM05D006742 ORTHO05D008755 8.7e-32 142.1 193 44.0
Lsat_1_v5_gn_2_26580 Lactuca sativa HOM05D006742 ORTHO05D008755 1.1e-31 141.7 194 44.8
Lsat_1_v5_gn_2_25261 Lactuca sativa HOM05D006742 ORTHO05D008755 1.9e-31 141.0 278 34.9
Lj7C532G3 Lonicera japonica HOM05D006742 ORTHO05D008755 4.8e-30 136.3 293 33.4
Lsat_1_v5_gn_2_28161 Lactuca sativa HOM05D006742 ORTHO05D008755 9.1e-29 132.1 385 30.9
Cpa.g.sc130.16 Carica papaya HOM05D008753 ORTHO05D010999 6.5e-27 125.9 307 32.2
QL02p078604 Quercus lobata HOM05D006742 ORTHO05D008755 1.2e-25 121.7 319 31.3
Lsat_1_v5_gn_2_26560 Lactuca sativa HOM05D006742 ORTHO05D008755 1.6e-25 121.3 284 33.5
GSVIVG01001831001 Vitis vinifera HOM05D006742 ORTHO05D008755 2.1e-25 120.9 349 30.1
Lsat_1_v5_gn_4_45660 Lactuca sativa HOM05D006742 ORTHO05D008755 3.0e-24 117.1 145 44.8
Lsat_1_v5_gn_7_42920 Lactuca sativa HOM05D006742 ORTHO05D008755 3.9e-24 116.7 198 33.8
Lsat_1_v5_gn_7_77380 Lactuca sativa HOM05D006742 ORTHO05D008755 1.3e-22 111.7 123 48.8
Duzib264G0176 Durio zibethinus HOM05D006742 ORTHO05D008755 6.3e-22 109.4 285 30.9
COL.COLO4_08771 Corchorus olitorius HOM05D006742 ORTHO05D008755 1.2e-20 105.1 315 29.2
Lj7C533T3 Lonicera japonica HOM05D006742 ORTHO05D008755 2.0e-20 104.4 289 31.1
QL02p078640 Quercus lobata HOM05D006742 ORTHO05D008755 1.1e-18 98.6 322 29.5
DCAR_031513 Daucus carota HOM05D006742 ORTHO05D008755 1.9e-18 97.8 334 26.3
QL02p078728 Quercus lobata HOM05D006742 ORTHO05D008755 1.2e-17 95.1 310 30.0
QL02p078713 Quercus lobata HOM05D006742 ORTHO05D008755 3.6e-17 93.6 330 26.7
COL.COLO4_08779 Corchorus olitorius HOM05D006742 ORTHO05D008755 7.9e-17 92.4 320 27.5
COL.COLO4_08775 Corchorus olitorius HOM05D006742 ORTHO05D008755 1.0e-16 92.0 327 25.1
TPR.G35632 Trifolium pratense HOM05D000002 ORTHO05D000001 1.8e-16 91.3 313 26.2
Cpa.g.sc130.17 Carica papaya HOM05D006742 ORTHO05D008755 2.3e-16 90.9 303 27.1
QL02p078719 Quercus lobata HOM05D006742 ORTHO05D008755 2.3e-16 90.9 299 28.8
Medtr6g023220 Medicago truncatula HOM05D008753 ORTHO05D010999 1.3e-14 85.1 288 24.3
QL02p078607 Quercus lobata HOM05D006742 ORTHO05D008755 2.2e-14 84.3 299 26.8
Lsat_1_v5_gn_4_45000 Lactuca sativa HOM05D006742 ORTHO05D008755 3.7e-14 83.6 120 35.0
Lalb_Chr03g0043461 Lupinus albus HOM05D008753 ORTHO05D010999 4.1e-13 80.1 276 24.6
Medtr3g006010 Medicago truncatula HOM05D008753 ORTHO05D010999 2.0e-12 77.8 317 26.8
Actinidia01831 Actinidia chinensis HOM05D000151 ORTHO05D000074 7.7e-12 75.9 289 27.0
Hma1.2p1_0548F.1_g176680 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 1.3e-11 75.1 310 25.8
Medtr6g091830 Medicago truncatula HOM05D008753 ORTHO05D010999 1.7e-11 74.7 325 25.2
Dinv12023 Davidia involucrata HOM05D000151 ORTHO05D000074 5.0e-11 73.2 325 24.9
Medtr6g092140 Medicago truncatula HOM05D008753 ORTHO05D010999 8.5e-11 72.4 325 24.9
QL02p078611 Quercus lobata HOM05D006742 ORTHO05D008755 1.1e-10 72.0 144 32.6
Dinv12036 Davidia involucrata HOM05D000151 ORTHO05D000074 1.5e-10 71.6 341 25.2
TAR636G2287 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.2e-10 70.5 349 25.2
QL07p015844 Quercus lobata HOM05D007879 ORTHO05D000440 4.2e-10 70.1 171 29.2
Medtr3g045700 Medicago truncatula HOM05D008753 ORTHO05D010999 5.5e-10 69.7 300 25.3
TAR636G1766 Trochodendron aralioides HOM05D000151 ORTHO05D000074 7.2e-10 69.3 330 27.6
MBI18_g45941_MAGBIO Magnolia biondii HOM05D000151 ORTHO05D000074 9.4e-10 68.9 233 26.2
QL12p023883 Quercus lobata HOM05D007879 ORTHO05D000440 2.1e-09 67.8 168 29.2
QL93p0358_0007 Quercus lobata HOM05D007879 ORTHO05D000440 2.7e-09 67.4 152 28.3
Dinv23958 Davidia involucrata HOM05D000151 ORTHO05D000074 3.6e-09 67.0 341 21.1
Medtr6g011110 Medicago truncatula HOM05D008753 ORTHO05D010999 4.7e-09 66.6 200 28.5
Aqoxy7G03805 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 6.1e-09 66.2 331 24.2
PGSC0003DMG400012149 Solanum tuberosum HOM05D000151 ORTHO05D000074 6.1e-09 66.2 213 27.7
Dinv38970 Davidia involucrata HOM05D000151 ORTHO05D000074 1.0e-08 65.5 342 22.2
FvH4_2g24700 Fragaria vesca HOM05D007879 ORTHO05D000440 4.0e-08 63.5 120 32.5
FAN15G1295 Fragaria x ananassa HOM05D007879 ORTHO05D000440 4.0e-08 63.5 120 32.5
FAN20G2795 Fragaria x ananassa HOM05D007879 ORTHO05D000440 4.0e-08 63.5 120 32.5
FAN24G0183 Fragaria x ananassa HOM05D007879 ORTHO05D000440 4.0e-08 63.5 120 32.5
RcHm_v2.0_Chr6g0312761 Rosa chinensis HOM05D000151 ORTHO05D000074 4.0e-08 63.5 313 25.6
QL02p078704 Quercus lobata HOM05D006742 ORTHO05D008755 5.2e-08 63.2 300 24.0
Rhsim02G0229800 Rhododendron simsii HOM05D000151 ORTHO05D000074 5.2e-08 63.2 295 24.4
Dinv38968 Davidia involucrata HOM05D000151 ORTHO05D000074 6.7e-08 62.8 344 22.4
PSO541G1699 Papaver somniferum HOM05D003035 ORTHO05D000440 8.8e-08 62.4 341 22.6
PGSC0003DMG400012148 Solanum tuberosum HOM05D000151 ORTHO05D000074 8.8e-08 62.4 208 26.9
FAN27G2132 Fragaria x ananassa HOM05D007879 ORTHO05D000440 1.2e-07 62.0 120 32.5
TAR636G2770 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.5e-07 61.6 321 26.2
TAR636G3441 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.0e-07 61.2 313 26.5
Actinidia06437 Actinidia chinensis HOM05D000151 ORTHO05D000074 3.3e-07 60.5 313 24.0
Dinv12037 Davidia involucrata HOM05D000151 ORTHO05D000074 3.3e-07 60.5 319 24.8
TAR636G2429 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.3e-07 60.5 208 29.3
Cc06_g19480 Coffea canephora HOM05D000151 ORTHO05D000074 4.4e-07 60.1 303 23.4
Cc11_g10930 Coffea canephora HOM05D000151 ORTHO05D000074 5.7e-07 59.7 226 26.1
ECA247G0474 Erigeron canadensis HOM05D007879 ORTHO05D000440 7.5e-07 59.3 121 31.4
PGSC0003DMG400012150 Solanum tuberosum HOM05D000151 ORTHO05D000074 9.7e-07 58.9 209 26.8
Dinv05292 Davidia involucrata HOM05D003536 ORTHO05D004233 1.3e-06 58.5 349 25.2
Hma1.2p1_0311F.1_g121210 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 1.3e-06 58.5 218 27.1
FvH4_1g04090 Fragaria vesca HOM05D000151 ORTHO05D000074 1.7e-06 58.2 332 22.6
Medtr6g088340 Medicago truncatula HOM05D008753 ORTHO05D010999 1.7e-06 58.2 255 25.5
TAR636G3198 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.7e-06 58.2 322 23.6
Lalb_Chr19g0124261 Lupinus albus HOM05D008753 ORTHO05D010999 2.2e-06 57.8 284 21.1
Medtr1g100280 Medicago truncatula HOM05D008753 ORTHO05D010999 2.2e-06 57.8 301 26.2
Oeu005193.1 Olea europaea HOM05D000151 ORTHO05D000074 2.2e-06 57.8 292 24.7
Prupe.2G290700 Prunus persica HOM05D000151 ORTHO05D000074 2.2e-06 57.8 308 23.7
RcHm_v2.0_Chr1g0324121 Rosa chinensis HOM05D000151 ORTHO05D000074 2.2e-06 57.8 319 23.8
Haze_04807 Corylus avellana HOM05D007879 ORTHO05D000440 2.8e-06 57.4 193 24.4
TAR636G0813 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.8e-06 57.4 268 24.6
TAR636G3348 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.8e-06 57.4 223 27.4
Dinv38940 Davidia involucrata HOM05D000151 ORTHO05D000074 3.7e-06 57.0 318 22.3
Rhsim13G0017600 Rhododendron simsii HOM05D007879 ORTHO05D000440 3.7e-06 57.0 139 26.6
TAR636G2284 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.7e-06 57.0 322 23.9
TAR636G2694 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.7e-06 57.0 322 23.9
Rhsim02G0229700 Rhododendron simsii HOM05D000151 ORTHO05D000074 4.8e-06 56.6 329 22.8
TAR636G0604 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.8e-06 56.6 296 28.4
Hma1.2p1_0311F.1_g121220 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 6.3e-06 56.2 215 27.9
FAN19G0497 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.2e-06 55.8 332 22.3
Peaxi162Scf00074g00073 Petunia axillaris HOM05D000151 ORTHO05D000074 8.2e-06 55.8 303 23.1


User provided reference genes

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