Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0244571 Helianthus annuus HOM05D003759 ORTHO05D004149 4.3e-109 398.3 244 100.0
HanXRQChr09g0244591 Helianthus annuus HOM05D003759 ORTHO05D004149 1.5e-85 320.1 243 72.4
HanXRQChr03g0065561 Helianthus annuus HOM05D003759 ORTHO05D004149 9.4e-48 194.5 253 48.2
Lsat_1_v5_gn_7_50020 Lactuca sativa HOM05D003759 ORTHO05D004149 1.0e-38 164.5 272 43.8
ECA240G4545 Erigeron canadensis HOM05D003759 ORTHO05D004149 3.1e-30 136.3 245 38.8
HanXRQChr12g0357671 Helianthus annuus HOM05D003759 ORTHO05D004149 3.1e-22 109.8 268 38.8
ECA234G4063 Erigeron canadensis HOM05D003759 ORTHO05D004149 1.5e-21 107.5 270 35.9
HanXRQChr10g0313651 Helianthus annuus HOM05D003759 ORTHO05D004149 6.8e-14 82.0 269 33.5
VMungo1215G0492 Vigna mungo HOM05D003759 ORTHO05D004149 7.5e-13 78.6 258 28.7
Hma1.2p1_0222F.1_g093656 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 3.7e-12 76.3 113 45.1
Hma1.2p1_2680F.1_g326800 Hydrangea macrophylla HOM05D003759 ORTHO05D004149 3.7e-12 76.3 113 45.1
Phvul.003G155300 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 1.4e-11 74.3 258 28.3
Nitab4.5_0008875g0010 Nicotiana tabacum HOM05D003759 ORTHO05D004149 7.1e-11 72.0 296 28.0
Nitab4.5_0002891g0100 Nicotiana tabacum HOM05D003759 ORTHO05D004149 1.2e-10 71.2 298 28.9
Rhsim03G0257600 Rhododendron simsii HOM05D003759 ORTHO05D004149 2.7e-10 70.1 78 52.6
Glyma.02G204900 Glycine max HOM05D003759 ORTHO05D004149 3.5e-10 69.7 252 28.2
Psat4g009880 Pisum sativum HOM05D003759 ORTHO05D004149 4.6e-10 69.3 188 32.4
Cc06_g14820 Coffea canephora HOM05D003759 ORTHO05D004149 6.0e-10 68.9 86 48.8
Oeu026461.3 Olea europaea HOM05D003759 ORTHO05D004149 7.8e-10 68.6 295 27.5
vmacro06067 Vaccinium macrocarpon HOM05D003759 ORTHO05D004149 7.8e-10 68.6 78 50.0
Lj4g0026574 Lotus japonicus HOM05D003759 ORTHO05D004149 1.3e-09 67.8 258 30.2
Peaxi162Scf00062g00131 Petunia axillaris HOM05D003759 ORTHO05D004149 1.3e-09 67.8 280 26.1
TPR.G24855 Trifolium pratense HOM05D003759 ORTHO05D004149 1.3e-09 67.8 254 27.2
Dinv43255 Davidia involucrata HOM05D003759 ORTHO05D004149 1.7e-09 67.4 261 29.5
Gohir.D08G273700 Gossypium hirsutum HOM05D003759 ORTHO05D004149 1.7e-09 67.4 245 26.9
BcaNung04561 Brassica carinata HOM05D003759 ORTHO05D004149 2.3e-09 67.0 261 31.0
Gorai.004G292200 Gossypium raimondii HOM05D003759 ORTHO05D004149 3.0e-09 66.6 245 26.9
Oeu021304.1 Olea europaea HOM05D003759 ORTHO05D004149 5.1e-09 65.9 296 28.4
Gohir.A05G052900 Gossypium hirsutum HOM05D003759 ORTHO05D004149 6.6e-09 65.5 114 36.8
CANSAT11G0712 Cannabis sativa HOM05D003759 ORTHO05D004149 8.6e-09 65.1 267 28.8
Lsat_1_v5_gn_5_90100 Lactuca sativa HOM05D003759 ORTHO05D004149 8.6e-09 65.1 182 30.2
HanXRQChr16g0511321 Helianthus annuus HOM05D003759 ORTHO05D004149 1.1e-08 64.7 104 45.2
Manes.06G035500 Manihot esculenta HOM05D003759 ORTHO05D004149 1.1e-08 64.7 265 30.2
Cpa.g.sc46.168 Carica papaya HOM05D003759 ORTHO05D004149 1.5e-08 64.3 258 29.5
Peaxi162Scf00401g00425 Petunia axillaris HOM05D003759 ORTHO05D004149 1.5e-08 64.3 89 48.3
SalBow1G6739 Salvia bowleyana HOM05D003759 ORTHO05D004149 1.9e-08 63.9 100 41.0
Sp7g28510 Schrenkiella parvula HOM05D003759 ORTHO05D004149 1.9e-08 63.9 257 28.8
CAN.G160.50 Capsicum annuum HOM05D003759 ORTHO05D004149 4.3e-08 62.8 300 27.7
Prupe.7G264400 Prunus persica HOM05D003759 ORTHO05D004149 4.3e-08 62.8 85 50.6
PGSC0003DMG400011142 Solanum tuberosum HOM05D003759 ORTHO05D004149 4.3e-08 62.8 304 28.3
SGA_v2.0_scaffold45G17024 Striga asiatica HOM05D003759 ORTHO05D004149 5.6e-08 62.4 262 28.2
VMungo1309G0866 Vigna mungo HOM05D003759 ORTHO05D004149 7.3e-08 62.0 258 27.1
SalBow1G3284 Salvia bowleyana HOM05D003759 ORTHO05D004149 9.5e-08 61.6 171 33.3
Glyma.17G073100 Glycine max HOM05D003759 ORTHO05D004149 1.2e-07 61.2 267 26.2
Nitab4.5_0005869g0060 Nicotiana tabacum HOM05D003759 ORTHO05D004149 1.2e-07 61.2 301 27.6
Medtr4g130700 Medicago truncatula HOM05D003759 ORTHO05D004149 2.1e-07 60.5 99 40.4
Sopen07g001800 Solanum pennellii HOM05D003759 ORTHO05D004149 2.1e-07 60.5 312 25.6
GSVIVG01023625001 Vitis vinifera HOM05D003759 ORTHO05D004149 2.1e-07 60.5 270 27.4
Actinidia38317 Actinidia chinensis HOM05D003759 ORTHO05D004149 3.6e-07 59.7 78 48.7
Cfa020811 Carpinus fangiana HOM05D003759 ORTHO05D004149 3.6e-07 59.7 67 53.7
Sopen12g004840 Solanum pennellii HOM05D003759 ORTHO05D004149 6.2e-07 58.9 300 26.7
RcHm_v2.0_Chr2g0085521 Rosa chinensis HOM05D003759 ORTHO05D004149 8.1e-07 58.5 64 50.0
Solyc12g009970.2 Solanum lycopersicum HOM05D003759 ORTHO05D004149 8.1e-07 58.5 300 26.3
MELO3C010213.2 Cucumis melo HOM05D003759 ORTHO05D004149 1.4e-06 57.8 250 24.8
CsaV3_1G029030 Cucumis sativus L. HOM05D003759 ORTHO05D004149 1.4e-06 57.8 273 26.7
Nitab4.5_0001571g0070 Nicotiana tabacum HOM05D003759 ORTHO05D004149 1.4e-06 57.8 302 27.2
PGR102G0437 Punica granatum HOM05D003759 ORTHO05D004149 1.4e-06 57.8 255 26.3
BcaNung02973 Brassica carinata HOM05D003759 ORTHO05D004149 1.8e-06 57.4 248 29.4
Lalb_Chr08g0234281 Lupinus albus HOM05D003759 ORTHO05D004149 1.8e-06 57.4 126 36.5
Phvul.009G204700 Phaseolus vulgaris HOM05D003759 ORTHO05D004149 1.8e-06 57.4 254 28.3
QL02p093514 Quercus lobata HOM05D003759 ORTHO05D004149 1.8e-06 57.4 67 50.7
ClCG06G012480 Citrullus lanatus HOM05D003759 ORTHO05D004149 2.4e-06 57.0 260 25.4
CsaV3_1G029050 Cucumis sativus L. HOM05D003759 ORTHO05D004149 2.4e-06 57.0 68 50.0
Thecc.09G028600 Theobroma cacao HOM05D003759 ORTHO05D004149 2.4e-06 57.0 67 49.3
MSTRG.6151 Avicennia marina HOM05D003759 ORTHO05D004149 3.1e-06 56.6 288 24.7
Migut.K00316 Erythranthe guttata HOM05D003759 ORTHO05D004149 3.1e-06 56.6 248 26.6
Thhalv10026294m.g Eutrema salsugineum HOM05D003759 ORTHO05D004149 3.1e-06 56.6 155 35.5
Haze_19170 Corylus avellana HOM05D003759 ORTHO05D004149 4.0e-06 56.2 67 52.2
SGA_v2.0_scaffold265G46100 Striga asiatica HOM05D003759 ORTHO05D004149 5.2e-06 55.8 281 23.8
Actinidia38668 Actinidia chinensis HOM05D003759 ORTHO05D004149 6.8e-06 55.5 63 50.8
AT4G30630 Arabidopsis thaliana HOM05D003759 ORTHO05D004149 6.8e-06 55.5 152 31.6
CARHR238510 Cardamine hirsuta HOM05D003759 ORTHO05D004149 6.8e-06 55.5 151 33.8
Solyc07g005690.3 Solanum lycopersicum HOM05D003759 ORTHO05D004149 6.8e-06 55.5 68 50.0


User provided reference genes

Program Settings