Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0243521 Helianthus annuus HOM05D007897 ORTHO05D010061 4.2e-65 251.1 122 100.0
HanXRQChr17g0535531 Helianthus annuus HOM05D007897 ORTHO05D010061 3.7e-61 238.0 121 95.0
HanXRQChr01g0022031 Helianthus annuus HOM05D007897 ORTHO05D010061 1.1e-57 226.5 121 92.6
ECA248G1461 Erigeron canadensis HOM05D007897 ORTHO05D010061 1.9e-36 156.0 121 66.9
Lsat_1_v5_gn_1_70121 Lactuca sativa HOM05D007897 ORTHO05D010061 1.9e-33 146.0 121 60.3
Ciclev10004784m.g Citrus clementina HOM05D007897 ORTHO05D010061 5.8e-22 107.8 127 44.9
Dinv32167 Davidia involucrata HOM05D007897 ORTHO05D010061 7.6e-22 107.5 110 53.6
Sed0009503 Sechium edule HOM05D007897 ORTHO05D010061 9.9e-22 107.1 127 47.2
COL.COLO4_35959 Corchorus olitorius HOM05D007897 ORTHO05D010061 1.3e-21 106.7 129 48.8
CSS0018651 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 1.7e-21 106.3 130 43.8
CSS0029276 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 1.7e-21 106.3 130 43.8
QL06p027281 Quercus lobata HOM05D007897 ORTHO05D010061 4.9e-21 104.8 128 46.1
Cpa.g.sc157.16 Carica papaya HOM05D007897 ORTHO05D010061 8.4e-21 104.0 126 45.2
Duzib212G0894 Durio zibethinus HOM05D007897 ORTHO05D010061 1.4e-20 103.2 109 49.5
Glyma.18G003400 Glycine max HOM05D007897 ORTHO05D010061 1.4e-20 103.2 126 44.4
Cc03_g09150 Coffea canephora HOM05D007897 ORTHO05D010061 2.4e-20 102.4 125 46.4
TAR633G2399 Trochodendron aralioides HOM05D007897 ORTHO05D010061 2.4e-20 102.4 110 48.2
Atru.chr3.1764 Acer truncatum HOM05D007897 ORTHO05D010061 4.2e-20 101.7 113 45.1
TAR633G2792 Trochodendron aralioides HOM05D007897 ORTHO05D010061 5.4e-20 101.3 110 48.2
Lalb_Chr03g0036571 Lupinus albus HOM05D007897 ORTHO05D010061 7.1e-20 100.9 130 41.5
TWI23G0094 Tripterygium wilfordii HOM05D007897 ORTHO05D010061 7.1e-20 100.9 127 45.7
PSO017G4232 Papaver somniferum HOM05D007897 ORTHO05D010061 1.6e-19 99.8 126 44.4
Gohir.A09G207900 Gossypium hirsutum HOM05D007897 ORTHO05D010061 2.1e-19 99.4 110 49.1
Gohir.D09G201400 Gossypium hirsutum HOM05D007897 ORTHO05D010061 2.1e-19 99.4 110 49.1
Cfa008662 Carpinus fangiana HOM05D007897 ORTHO05D010061 2.7e-19 99.0 126 42.9
Thecc.04G191100 Theobroma cacao HOM05D007897 ORTHO05D010061 3.5e-19 98.6 111 46.8
MD04G1021700 Malus domestica HOM05D007897 ORTHO05D010061 4.6e-19 98.2 126 41.3
CiPaw.02G062400 Carya illinoinensis HOM05D007897 ORTHO05D010061 6.0e-19 97.8 127 44.1
Eucgr.L00640 Eucalyptus grandis HOM05D007897 ORTHO05D010061 6.0e-19 97.8 126 42.1
Gorai.006G225200 Gossypium raimondii HOM05D007897 ORTHO05D010061 6.0e-19 97.8 110 48.2
Nn8g41262 Nelumbo nucifera HOM05D007897 ORTHO05D010061 6.0e-19 97.8 127 42.5
Haze_11681 Corylus avellana HOM05D007897 ORTHO05D010061 7.9e-19 97.4 126 42.1
Glyma.11G253700 Glycine max HOM05D007897 ORTHO05D010061 1.0e-18 97.1 110 46.4
Oeu050723.3 Olea europaea HOM05D007897 ORTHO05D009229 1.0e-18 97.1 115 46.1
Manes.05G198900 Manihot esculenta HOM05D007897 ORTHO05D010061 2.3e-18 95.9 127 43.3
PSO063G5193 Papaver somniferum HOM05D007897 ORTHO05D010061 2.3e-18 95.9 126 42.1
arahy.Tifrunner.gnm1.ann1.T7EAWL Arachis hypogaea HOM05D007897 ORTHO05D010061 3.0e-18 95.5 126 42.9
Phvul.001G265200 Phaseolus vulgaris HOM05D007897 ORTHO05D010061 3.0e-18 95.5 127 42.5
Potri.014G149500 Populus trichocarpa HOM05D007897 ORTHO05D010061 3.0e-18 95.5 110 47.3
VMungo1383G3288 Vigna mungo HOM05D007897 ORTHO05D010061 3.9e-18 95.1 127 42.5
PGR142G1366 Punica granatum HOM05D007897 ORTHO05D010061 5.1e-18 94.7 113 47.8
THA.LOC104808674 Tarenaya hassleriana HOM05D007897 ORTHO05D010061 5.1e-18 94.7 127 39.4
arahy.Tifrunner.gnm1.ann1.TEUF1S Arachis hypogaea HOM05D007897 ORTHO05D010061 6.6e-18 94.4 126 42.1
AL7G42190 Arabidopsis lyrata HOM05D007897 ORTHO05D010061 1.1e-17 93.6 128 37.5
FAN22G1341 Fragaria x ananassa HOM05D007897 ORTHO05D010061 1.1e-17 93.6 127 39.4
FvH4_4g12861 Fragaria vesca HOM05D007897 ORTHO05D010061 1.5e-17 93.2 127 39.4
Oeu050722.1 Olea europaea HOM05D005839 ORTHO05D009229 1.5e-17 93.2 124 41.1
Sabra14G0112700 Salix brachista HOM05D007897 ORTHO05D010061 1.9e-17 92.8 110 46.4
AT4G14190 Arabidopsis thaliana HOM05D007897 ORTHO05D010061 2.5e-17 92.4 128 38.3
Aa31LG9G3200 Aethionema arabicum HOM05D007897 ORTHO05D010061 4.3e-17 91.7 116 40.5
FAN07G0261 Fragaria x ananassa HOM05D005839 ORTHO05D005686 4.3e-17 91.7 127 38.6
Thhalv10027442m.g Eutrema salsugineum HOM05D007897 ORTHO05D010061 7.3e-17 90.9 130 40.8
MBI07_g06195_MAGBIO Magnolia biondii HOM05D007897 ORTHO05D010061 7.3e-17 90.9 110 44.5
RcHm_v2.0_Chr4g0412521 Rosa chinensis HOM05D007897 ORTHO05D010061 9.6e-17 90.5 130 37.7
CARHR220230 Cardamine hirsuta HOM05D007897 ORTHO05D010061 2.1e-16 89.4 127 36.2
Sp6g16180 Schrenkiella parvula HOM05D007897 ORTHO05D010061 3.6e-16 88.6 124 37.1
CANSAT78G0179 Cannabis sativa HOM05D007897 ORTHO05D010061 4.8e-16 88.2 126 39.7
C09p44340 Brassica napus HOM05D007897 ORTHO05D010061 8.1e-16 87.4 122 39.3
Carub.0007s2820 Capsella rubella HOM05D007897 ORTHO05D010061 8.1e-16 87.4 121 37.2
BraA10t43238Z Brassica rapa HOM05D007897 ORTHO05D010061 2.4e-15 85.9 122 39.3
FAN17G1799 Fragaria x ananassa HOM05D005839 ORTHO05D005686 2.4e-15 85.9 127 37.0
BcaB08g35766 Brassica carinata HOM05D007897 ORTHO05D010061 3.1e-15 85.5 125 39.2
BcaC04g20377 Brassica carinata HOM05D007897 ORTHO05D010061 4.0e-15 85.1 122 39.3
BolC9t57304H Brassica oleracea HOM05D007897 ORTHO05D010061 4.0e-15 85.1 122 39.3
A10p11440 Brassica napus HOM05D007897 ORTHO05D010061 5.3e-15 84.7 122 39.3
ATR0807G097 Amborella trichopoda HOM05D007897 ORTHO05D010061 2.9e-13 79.0 113 40.7
HPP92_007232 Vanilla planifolia HOM05D007897 ORTHO05D010061 1.9e-12 76.3 114 36.8
Sopen05g027850 Solanum pennellii HOM05D007036 ORTHO05D008885 5.3e-07 58.2 102 34.3
PGSC0003DMG400013697 Solanum tuberosum HOM05D007036 ORTHO05D008885 9.0e-07 57.4 102 34.3
Nitab4.5_0000404g0190 Nicotiana tabacum HOM05D007036 ORTHO05D008885 3.4e-06 55.5 106 33.0
CAN.G106.6 Capsicum annuum HOM05D007036 ORTHO05D008885 4.5e-06 55.1 102 34.3
Peaxi162Scf00954g00025 Petunia axillaris HOM05D007036 ORTHO05D008885 5.8e-06 54.7 106 32.1


User provided reference genes

Program Settings