Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 3.5e-106 388.3 190 100.0
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 8.0e-95 350.5 190 90.5
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 9.5e-88 327.0 185 85.4
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 2.4e-83 312.4 190 83.7
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 6.4e-76 287.7 189 75.1
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 9.2e-75 283.9 190 74.2
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 1.1e-72 276.9 190 72.6
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 5.6e-72 274.6 192 71.9
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 2.1e-71 272.7 192 71.4
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 8.1e-71 270.8 190 69.5
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 6.8e-70 267.7 190 67.9
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 6.8e-70 267.7 190 67.9
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 1.2e-69 266.9 190 65.3
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 1.5e-69 266.5 190 68.9
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 1.7e-68 263.1 191 70.2
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 2.2e-68 262.7 187 67.9
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 2.2e-68 262.7 191 69.6
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 1.4e-67 260.0 190 67.9
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 2.4e-67 259.2 191 69.1
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 4.1e-67 258.5 190 65.3
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 9.2e-67 257.3 190 66.3
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 1.2e-66 256.9 190 65.8
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 2.1e-66 256.1 190 66.3
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 2.1e-66 256.1 192 66.1
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 2.7e-66 255.8 191 67.5
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 3.5e-66 255.4 192 66.1
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 4.6e-66 255.0 190 66.3
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 4.6e-66 255.0 191 64.9
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 6.0e-66 254.6 192 65.1
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 6.0e-66 254.6 189 64.6
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 7.8e-66 254.2 181 67.4
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 1.0e-65 253.8 187 66.3
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 1.3e-65 253.4 191 66.0
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.3e-65 252.7 190 64.2
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 2.3e-65 252.7 192 65.1
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 3.0e-65 252.3 193 65.8
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 6.6e-65 251.1 191 67.0
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 1.9e-64 249.6 190 61.6
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 1.9e-64 249.6 196 64.8
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.9e-64 249.6 191 66.0
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 1.9e-64 249.6 191 66.0
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 3.3e-64 248.8 191 64.4
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 4.3e-64 248.4 191 64.4
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 4.3e-64 248.4 196 63.8
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 5.6e-64 248.1 252 53.2
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 1.2e-63 246.9 190 63.7
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 1.6e-63 246.5 196 62.2
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 3.6e-63 245.4 191 61.3
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 6.2e-63 244.6 197 62.9
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 6.2e-63 244.6 196 61.2
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 8.1e-63 244.2 191 62.8
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 8.1e-63 244.2 191 62.8
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 8.1e-63 244.2 191 61.3
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 1.4e-62 243.4 191 62.3
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 1.8e-62 243.0 193 64.2
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 1.8e-62 243.0 191 62.8
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 3.1e-62 242.3 191 62.3
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 3.1e-62 242.3 191 62.3
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 4.0e-62 241.9 224 56.7
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 5.2e-62 241.5 190 62.6
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 6.8e-62 241.1 191 63.9
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 6.8e-62 241.1 191 63.4
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 8.9e-62 240.7 191 62.3
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 1.2e-61 240.4 193 64.8
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 1.2e-61 240.4 189 63.5
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 1.2e-61 240.4 196 60.2
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 3.4e-61 238.8 191 61.8
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 4.4e-61 238.4 190 60.5
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 7.6e-61 237.7 191 62.8
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 1.3e-60 236.9 191 61.3
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 1.3e-60 236.9 191 61.3
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 2.9e-60 235.7 159 73.0
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 3.8e-60 235.3 191 62.8
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 1.4e-59 233.4 197 59.9
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 1.9e-59 233.0 191 59.7
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 1.9e-59 233.0 183 62.3
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 9.3e-59 230.7 181 63.5
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 2.1e-58 229.6 184 59.2
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 5.1e-57 224.9 175 61.1
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 6.6e-57 224.6 191 59.7
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 2.5e-56 222.6 160 67.5
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 7.3e-56 221.1 189 58.2
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 7.3e-56 221.1 189 58.2
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 9.6e-56 220.7 200 58.0
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 1.6e-55 219.9 191 57.1
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 2.1e-55 219.5 161 65.2
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 2.1e-55 219.5 181 59.1
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 2.1e-55 219.5 189 57.7
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 3.6e-55 218.8 144 72.9
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 4.8e-55 218.4 201 58.2
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 6.2e-55 218.0 189 58.7
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 9.3e-51 204.1 141 70.2
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 5.1e-49 198.4 151 64.9
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 6.6e-49 198.0 142 63.4
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 1.1e-48 197.2 192 56.8
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 1.5e-48 196.8 147 58.5
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 1.3e-47 193.7 190 55.3
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 1.5e-45 186.8 158 54.4
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 5.1e-41 171.8 161 52.8
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 1.5e-40 170.2 132 59.8
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 2.9e-36 156.0 191 48.7
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 3.8e-36 155.6 191 46.1
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 4.6e-34 148.7 183 46.4
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 3.9e-33 145.6 191 46.1
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 1.6e-31 140.2 97 72.2
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 1.0e-28 131.0 87 70.1
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 5.0e-28 128.6 118 55.1
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 5.0e-28 128.6 120 52.5
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 3.5e-26 122.5 89 67.4
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 6.7e-25 118.2 179 38.0
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 9.7e-24 114.4 93 57.0
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 4.5e-21 105.5 165 35.2
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 5.9e-21 105.1 138 40.6
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 1.3e-20 104.0 68 76.5
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 1.9e-19 100.1 123 46.3
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 2.5e-19 99.8 78 67.9
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 5.5e-11 72.0 101 44.6
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 7.2e-11 71.6 98 34.7
AUR62043674 Chenopodium quinoa HOM05D006513 ORTHO05D003876 6.1e-10 68.6 47 66.0
RcHm_v2.0_Chr7g0212941 Rosa chinensis HOM05D006513 ORTHO05D008150 1.7e-07 60.5 32 93.8
Cpa.g.sc75.50 Carica papaya HOM05D006513 ORTHO05D008150 4.8e-07 58.9 49 69.4


User provided reference genes

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