Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0240341 Helianthus annuus HOM05D012280 ORTHO05D012378 6.6e-161 571.2 432 100.0
HanXRQChr17g0570631 Helianthus annuus HOM05D012280 ORTHO05D012378 7.0e-155 551.2 432 96.5
HanXRQChr13g0396521 Helianthus annuus HOM05D000005 ORTHO05D000012 1.2e-69 268.1 319 76.5
HanXRQChr09g0240841 Helianthus annuus HOM05D000005 ORTHO05D000012 4.2e-67 259.6 172 74.4
HanXRQChr09g0239991 Helianthus annuus HOM05D000005 ORTHO05D000012 5.2e-57 226.1 476 58.4
HanXRQChr09g0240561 Helianthus annuus HOM05D012280 ORTHO05D012378 5.2e-41 172.9 298 50.0
HanXRQChr09g0239731 Helianthus annuus HOM05D000005 ORTHO05D000012 8.9e-41 172.2 159 54.7
HanXRQChr09g0239251 Helianthus annuus HOM05D000005 ORTHO05D000012 3.7e-39 166.8 193 51.8
HanXRQChr09g0239441 Helianthus annuus HOM05D012280 ORTHO05D012378 4.1e-38 163.3 270 49.3
HanXRQChr09g0240101 Helianthus annuus HOM05D012280 ORTHO05D012378 3.5e-37 160.2 171 49.7
HanXRQChr09g0237661 Helianthus annuus HOM05D012280 ORTHO05D225755 1.7e-36 157.9 234 84.6
HanXRQChr09g0239431 Helianthus annuus HOM05D000005 ORTHO05D000012 2.3e-36 157.5 313 46.0
HanXRQChr09g0239531 Helianthus annuus HOM05D000005 ORTHO05D000012 2.3e-36 157.5 161 52.2
HanXRQChr09g0240261 Helianthus annuus HOM05D000005 ORTHO05D012378 1.9e-35 154.5 153 53.6
ECA240G0669 Erigeron canadensis HOM05D000005 ORTHO05D000012 7.3e-35 152.5 320 45.0
HanXRQChr09g0239471 Helianthus annuus HOM05D012280 ORTHO05D012378 7.3e-35 152.5 150 52.7
Lsat_1_v5_gn_8_82140 Lactuca sativa HOM05D000005 ORTHO05D000012 5.2e-33 146.4 163 47.9
Lsat_1_v5_gn_4_150641 Lactuca sativa HOM05D000005 ORTHO05D000012 6.8e-33 146.0 169 47.3
HanXRQChr03g0077081 Helianthus annuus HOM05D012280 ORTHO05D012378 1.2e-32 145.2 406 38.9
Lsat_1_v5_gn_9_91400 Lactuca sativa HOM05D000005 ORTHO05D000012 1.3e-31 141.7 171 46.8
ECA240G2019 Erigeron canadensis HOM05D000005 ORTHO05D000012 2.2e-31 141.0 161 48.4
ECA240G4241 Erigeron canadensis HOM05D000005 ORTHO05D000012 3.7e-31 140.2 273 37.7
Lsat_1_v5_gn_4_144921 Lactuca sativa HOM05D000005 ORTHO05D000012 4.9e-31 139.8 172 44.8
Lsat_1_v5_gn_4_111140 Lactuca sativa HOM05D000005 ORTHO05D000012 3.2e-30 137.1 169 45.0
Lsat_1_v5_gn_4_37921 Lactuca sativa HOM05D000005 ORTHO05D000012 3.2e-30 137.1 243 35.0
Lsat_1_v5_gn_4_148200 Lactuca sativa HOM05D000005 ORTHO05D000012 4.1e-30 136.7 168 44.0
Lsat_1_v5_gn_4_150561 Lactuca sativa HOM05D000005 ORTHO05D000012 4.1e-30 136.7 168 45.8
Lsat_1_v5_gn_4_150441 Lactuca sativa HOM05D000005 ORTHO05D000012 1.2e-29 135.2 169 42.6
Lsat_1_v5_gn_9_14781 Lactuca sativa HOM05D000005 ORTHO05D000012 1.2e-29 135.2 163 46.0
Lsat_1_v5_gn_9_91461 Lactuca sativa HOM05D000005 ORTHO05D000012 3.5e-29 133.7 166 45.8
Lsat_1_v5_gn_5_39581 Lactuca sativa HOM05D000005 ORTHO05D000012 7.8e-29 132.5 179 40.8
Lsat_1_v5_gn_4_150461 Lactuca sativa HOM05D000005 ORTHO05D000012 1.0e-28 132.1 169 46.2
Lsat_1_v5_gn_4_150681 Lactuca sativa HOM05D000005 ORTHO05D000012 3.0e-28 130.6 247 44.1
Lsat_1_v5_gn_9_90700 Lactuca sativa HOM05D000005 ORTHO05D000012 5.1e-28 129.8 169 42.6
Lsat_1_v5_gn_5_39460 Lactuca sativa HOM05D000005 ORTHO05D000012 8.6e-28 129.0 166 44.0
Lsat_1_v5_gn_4_147480 Lactuca sativa HOM05D000005 ORTHO05D000012 3.3e-27 127.1 171 42.7
Lsat_1_v5_gn_5_38001 Lactuca sativa HOM05D000005 ORTHO05D000012 3.3e-27 127.1 171 42.7
Lsat_1_v5_gn_4_148180 Lactuca sativa HOM05D012280 ORTHO05D012378 2.8e-26 124.0 257 33.1
Lsat_1_v5_gn_5_38020 Lactuca sativa HOM05D000005 ORTHO05D000012 2.8e-26 124.0 114 52.6
Lsat_1_v5_gn_5_39440 Lactuca sativa HOM05D000005 ORTHO05D000012 4.7e-26 123.2 161 45.3
ECA240G2018 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.8e-25 121.3 179 44.7
Lsat_1_v5_gn_4_148140 Lactuca sativa HOM05D000005 ORTHO05D000012 2.3e-25 120.9 124 50.8
Lsat_1_v5_gn_8_40680 Lactuca sativa HOM05D000005 ORTHO05D000012 3.1e-25 120.6 244 34.8
Lsat_1_v5_gn_9_91840 Lactuca sativa HOM05D000005 ORTHO05D000012 5.2e-25 119.8 171 39.8
HanXRQChr03g0077121 Helianthus annuus HOM05D012280 ORTHO05D012378 1.5e-24 118.2 316 42.7
HanXRQChr09g0240011 Helianthus annuus HOM05D000005 ORTHO05D000012 1.5e-24 118.2 120 50.0
Lsat_1_v5_gn_9_91880 Lactuca sativa HOM05D000005 ORTHO05D000012 2.0e-24 117.9 166 39.8
Lsat_1_v5_gn_9_91940 Lactuca sativa HOM05D000005 ORTHO05D000012 2.0e-24 117.9 165 42.4
Lsat_1_v5_gn_4_150501 Lactuca sativa HOM05D000005 ORTHO05D012378 7.6e-24 115.9 168 39.9
Lsat_1_v5_gn_4_37841 Lactuca sativa HOM05D000005 ORTHO05D000012 7.6e-24 115.9 242 34.3
Lsat_1_v5_gn_4_148360 Lactuca sativa HOM05D000005 ORTHO05D000012 9.9e-24 115.5 168 39.9
Lsat_1_v5_gn_4_37821 Lactuca sativa HOM05D000005 ORTHO05D000012 1.7e-23 114.8 254 32.3
ECA240G2185 Erigeron canadensis HOM05D000005 ORTHO05D000012 5.4e-22 109.8 187 42.2
Lsat_1_v5_gn_4_37901 Lactuca sativa HOM05D000005 ORTHO05D000012 3.3e-19 100.5 245 31.8
Lsat_1_v5_gn_4_150621 Lactuca sativa HOM05D000005 ORTHO05D000012 1.2e-18 98.6 186 34.9
HanXRQChr04g0098371 Helianthus annuus HOM05D000005 ORTHO05D012378 1.1e-17 95.5 209 31.6
HanXRQChr10g0317141 Helianthus annuus HOM05D000005 ORTHO05D000012 1.1e-17 95.5 239 30.1
HanXRQChr09g0239271 Helianthus annuus HOM05D012280 ORTHO05D012378 1.4e-17 95.1 123 42.3
Lsat_1_v5_gn_4_145880 Lactuca sativa HOM05D000005 ORTHO05D019004 2.4e-17 94.4 167 35.3
HanXRQChr04g0098911 Helianthus annuus HOM05D000005 ORTHO05D000012 4.4e-16 90.1 237 29.5
HanXRQChr09g0240081 Helianthus annuus HOM05D025036 ORTHO05D221687 4.4e-16 90.1 222 73.9
HanXRQChr04g0098511 Helianthus annuus HOM05D000005 ORTHO05D000012 5.8e-16 89.7 218 30.3
HanXRQChr04g0098541 Helianthus annuus HOM05D000005 ORTHO05D000012 5.8e-16 89.7 219 31.1
HanXRQChr04g0098741 Helianthus annuus HOM05D000005 ORTHO05D012378 5.8e-16 89.7 214 30.8
HanXRQChr04g0098661 Helianthus annuus HOM05D000005 ORTHO05D000012 1.3e-15 88.6 215 31.2
HanXRQChr04g0098851 Helianthus annuus HOM05D000005 ORTHO05D012378 1.3e-15 88.6 214 30.8
HanXRQChr09g0237651 Helianthus annuus HOM05D012280 ORTHO05D012378 1.7e-15 88.2 73 61.6
ECA240G0167 Erigeron canadensis HOM05D012131 ORTHO05D015641 1.1e-14 85.5 270 43.0
Lsat_1_v5_gn_4_147380 Lactuca sativa HOM05D000005 ORTHO05D000012 1.4e-14 85.1 162 37.0
HanXRQChr16g0521751 Helianthus annuus HOM05D000005 ORTHO05D012378 1.2e-13 82.0 269 32.3
HanXRQChr10g0317291 Helianthus annuus HOM05D019679 ORTHO05D012378 2.7e-13 80.9 229 27.9
Lsat_1_v5_gn_2_32820 Lactuca sativa HOM05D000005 ORTHO05D000012 3.5e-13 80.5 167 33.5
Lsat_1_v5_gn_5_27220 Lactuca sativa HOM05D000005 ORTHO05D000012 7.8e-13 79.3 270 25.2
Lsat_1_v5_gn_2_4981 Lactuca sativa HOM05D000005 ORTHO05D000012 2.3e-12 77.8 221 26.7
HanXRQChr04g0098501 Helianthus annuus HOM05D000005 ORTHO05D019004 5.1e-12 76.6 193 30.1
HanXRQChr04g0098761 Helianthus annuus HOM05D000005 ORTHO05D000012 5.1e-12 76.6 237 28.3
HanXRQChr09g0244071 Helianthus annuus HOM05D000005 ORTHO05D000012 6.6e-12 76.3 248 26.6
Lsat_1_v5_gn_2_17301 Lactuca sativa HOM05D000005 ORTHO05D000012 1.1e-11 75.5 170 28.8
HanXRQChr16g0522521 Helianthus annuus HOM05D000005 ORTHO05D000012 3.3e-11 73.9 170 32.9
Lsat_1_v5_gn_2_25361 Lactuca sativa HOM05D000005 ORTHO05D000012 3.3e-11 73.9 215 44.2
Lsat_1_v5_gn_9_92740 Lactuca sativa HOM05D000005 ORTHO05D000012 3.6e-10 70.5 108 38.9
Lsat_1_v5_gn_9_93340 Lactuca sativa HOM05D000005 ORTHO05D000012 1.1e-09 68.9 107 39.3
Lsat_1_v5_gn_4_148261 Lactuca sativa HOM05D000005 ORTHO05D000012 1.4e-09 68.6 75 50.7
Lju50C35G4 Lonicera japonica HOM05D007424 ORTHO05D001748 1.8e-09 68.2 169 30.2
HanXRQChr04g0098561 Helianthus annuus HOM05D000005 ORTHO05D000012 5.3e-09 66.6 146 31.5
HanXRQChr09g0240031 Helianthus annuus HOM05D025036 ORTHO05D220333 9.0e-09 65.9 43 69.8
HanXRQChr09g0240111 Helianthus annuus HOM05D025036 ORTHO05D220051 1.2e-08 65.5 43 67.4
HanXRQChr09g0239191 Helianthus annuus HOM05D012280 ORTHO05D012378 2.6e-08 64.3 195 47.2
HanXRQChr09g0240411 Helianthus annuus HOM05D025036 ORTHO05D222539 2.6e-08 64.3 43 67.4
HanXRQChr17g0570661 Helianthus annuus HOM05D025036 ORTHO05D220866 1.3e-07 62.0 195 70.3
RcHm_v2.0_Chr6g0251641 Rosa chinensis HOM05D000005 ORTHO05D000012 1.7e-07 61.6 86 43.0
Lsat_1_v5_gn_9_92980 Lactuca sativa HOM05D000005 ORTHO05D000012 2.2e-07 61.2 104 35.6
Lsat_1_v5_gn_5_159861 Lactuca sativa HOM05D000005 ORTHO05D036373 3.8e-07 60.5 109 33.9
HanXRQChr09g0239701 Helianthus annuus HOM05D000005 ORTHO05D000012 4.9e-07 60.1 41 63.4
Lsat_1_v5_gn_2_15941 Lactuca sativa HOM05D000005 ORTHO05D000012 6.4e-07 59.7 127 30.7
Solyc02g082050.3 Solanum lycopersicum HOM05D000005 ORTHO05D000012 1.9e-06 58.2 84 38.1
HanXRQChr16g0521551 Helianthus annuus HOM05D000005 ORTHO05D000012 3.2e-06 57.4 60 51.7
Lj3C243T3 Lonicera japonica HOM05D000005 ORTHO05D001748 3.2e-06 57.4 170 29.4
QL11p043140 Quercus lobata HOM05D000005 ORTHO05D000012 4.2e-06 57.0 77 39.0
Sopen02g026700 Solanum pennellii HOM05D000005 ORTHO05D000012 4.2e-06 57.0 84 36.9


User provided reference genes

Program Settings