Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0240301 Helianthus annuus HOM05D000639 ORTHO05D028406 5.9e-74 280.8 144 100.0
HanXRQChr13g0411281 Helianthus annuus HOM05D000639 ORTHO05D004019 3.5e-50 201.8 107 94.4
HanXRQChr03g0080961 Helianthus annuus HOM05D000639 ORTHO05D004019 2.2e-44 182.6 107 83.2
Lsat_1_v5_gn_5_53081 Lactuca sativa HOM05D000639 ORTHO05D004019 7.0e-43 177.6 107 80.4
ECA240G4511 Erigeron canadensis HOM05D000639 ORTHO05D004019 1.9e-40 169.5 107 82.2
Migut.G00162 Erythranthe guttata HOM05D000639 ORTHO05D004019 5.2e-38 161.4 107 76.6
MD13G1168500 Malus domestica HOM05D000639 ORTHO05D004019 6.8e-38 161.0 107 72.0
Hma1.2p1_0078F.1_g040530 Hydrangea macrophylla HOM05D000639 ORTHO05D004019 8.9e-38 160.6 107 74.8
Actinidia01464 Actinidia chinensis HOM05D000639 ORTHO05D004019 1.2e-37 160.2 121 66.1
Prupe.1G136600 Prunus persica HOM05D000639 ORTHO05D004019 1.5e-37 159.8 107 71.0
RcHm_v2.0_Chr4g0422261 Rosa chinensis HOM05D000639 ORTHO05D004019 1.5e-37 159.8 107 71.0
Thecc.04G284900 Theobroma cacao HOM05D000639 ORTHO05D004019 1.5e-37 159.8 107 72.9
DCAR_027075 Daucus carota HOM05D000639 ORTHO05D004019 5.8e-37 157.9 107 73.8
MSTRG.10095 Avicennia marina HOM05D000639 ORTHO05D004019 7.5e-37 157.5 107 75.7
CSS0043025 Camellia sinensis var. sinensis HOM05D000639 ORTHO05D004019 1.3e-36 156.8 107 70.1
MD16G1168900 Malus domestica HOM05D000639 ORTHO05D004019 1.7e-36 156.4 107 70.1
Actinidia40256 Actinidia chinensis HOM05D000639 ORTHO05D004019 2.2e-36 156.0 121 65.3
CAN.G449.33 Capsicum annuum HOM05D000639 ORTHO05D004019 2.2e-36 156.0 117 67.5
FvH4_4g18050 Fragaria vesca HOM05D000639 ORTHO05D004019 2.2e-36 156.0 109 72.5
FAN17G3001 Fragaria x ananassa HOM05D000639 ORTHO05D004019 2.2e-36 156.0 108 72.2
CSS0034707 Camellia sinensis var. sinensis HOM05D000639 ORTHO05D004019 2.9e-36 155.6 107 70.1
GSVIVG01017761001 Vitis vinifera HOM05D000639 ORTHO05D004019 3.7e-36 155.2 107 69.2
Atru.chr4.2839 Acer truncatum HOM05D000639 ORTHO05D004019 4.9e-36 154.8 108 69.4
CiPaw.02G082800 Carya illinoinensis HOM05D000639 ORTHO05D004019 4.9e-36 154.8 129 60.5
CAN.G484.33 Capsicum annuum HOM05D000639 ORTHO05D004019 6.4e-36 154.5 107 72.0
Lj6C676T4 Lonicera japonica HOM05D000639 ORTHO05D004019 6.4e-36 154.5 101 74.3
EL10Ac3g06602 Beta vulgaris HOM05D000639 ORTHO05D004019 8.3e-36 154.1 130 60.8
Nitab4.5_0001233g0100 Nicotiana tabacum HOM05D000639 ORTHO05D004019 1.1e-35 153.7 99 75.8
Nitab4.5_0001904g0120 Nicotiana tabacum HOM05D000639 ORTHO05D004019 1.1e-35 153.7 99 75.8
SalBow2G1467 Salvia bowleyana HOM05D000639 ORTHO05D004019 1.1e-35 153.7 128 64.1
Nitab4.5_0003466g0120 Nicotiana tabacum HOM05D000639 ORTHO05D004019 1.9e-35 152.9 106 70.8
TWI73G0330 Tripterygium wilfordii HOM05D000639 ORTHO05D004019 2.4e-35 152.5 107 72.0
Gohir.D09G239900 Gossypium hirsutum HOM05D000639 ORTHO05D004019 3.2e-35 152.1 107 66.4
Gorai.006G262700 Gossypium raimondii HOM05D000639 ORTHO05D004019 3.2e-35 152.1 107 66.4
Cpa.g.sc16.172 Carica papaya HOM05D000639 ORTHO05D004019 4.1e-35 151.8 107 69.2
COL.COLO4_13868 Corchorus olitorius HOM05D000639 ORTHO05D004019 4.1e-35 151.8 107 69.2
Gorai.006G076000 Gossypium raimondii HOM05D000639 ORTHO05D004019 5.4e-35 151.4 107 69.2
MSTRG.3915 Avicennia marina HOM05D000639 ORTHO05D004019 7.1e-35 151.0 107 72.0
Sc19g0005320 Simmondsia chinensis HOM05D000639 ORTHO05D004019 7.1e-35 151.0 127 59.1
Eucgr.B01318 Eucalyptus grandis HOM05D000639 ORTHO05D004019 1.6e-34 149.8 107 69.2
Hund24894 Selenicereus undatus HOM05D000639 ORTHO05D004019 1.6e-34 149.8 107 70.1
Duzib212G0808 Durio zibethinus HOM05D000639 ORTHO05D004019 2.7e-34 149.1 107 67.3
Gohir.A09G062500 Gossypium hirsutum HOM05D000639 ORTHO05D004019 2.7e-34 149.1 107 68.2
Potri.010G014600 Populus trichocarpa HOM05D000639 ORTHO05D004019 2.7e-34 149.1 109 68.8
Ciclev10004703m.g Citrus clementina HOM05D000639 ORTHO05D004019 3.5e-34 148.7 108 69.4
Gohir.A09G239000 Gossypium hirsutum HOM05D000639 ORTHO05D004019 3.5e-34 148.7 107 64.5
Nitab4.5_0000570g0130 Nicotiana tabacum HOM05D000639 ORTHO05D004019 3.5e-34 148.7 107 70.1
Peaxi162Scf00086g00431 Petunia axillaris HOM05D000639 ORTHO05D004019 3.5e-34 148.7 106 70.8
TAR362G0702 Trochodendron aralioides HOM05D000639 ORTHO05D004019 3.5e-34 148.7 109 67.9
Gohir.D10G170500 Gossypium hirsutum HOM05D000639 ORTHO05D004019 6.0e-34 147.9 107 69.2
AT3G06930 Arabidopsis thaliana HOM05D000639 ORTHO05D004019 7.8e-34 147.5 130 59.2
Thhalv10003986m.g Eutrema salsugineum HOM05D000639 ORTHO05D004019 7.8e-34 147.5 107 64.5
A02p37840 Brassica napus HOM05D000639 ORTHO05D004019 1.0e-33 147.1 107 66.4
THA.LOC104818926 Tarenaya hassleriana HOM05D000639 ORTHO05D004019 1.0e-33 147.1 107 63.6
BraA02t08766Z Brassica rapa HOM05D000639 ORTHO05D004019 1.3e-33 146.7 107 64.5
THA.LOC104802688 Tarenaya hassleriana HOM05D000639 ORTHO05D004019 1.3e-33 146.7 107 64.5
CANSAT78G0502 Cannabis sativa HOM05D000639 ORTHO05D004019 1.7e-33 146.4 130 61.5
Gorai.011G190400 Gossypium raimondii HOM05D000639 ORTHO05D004019 1.7e-33 146.4 107 66.4
QL06p008928 Quercus lobata HOM05D000639 ORTHO05D004019 1.7e-33 146.4 130 57.7
Gohir.A10G164200 Gossypium hirsutum HOM05D000639 ORTHO05D004019 2.3e-33 146.0 107 69.2
Hma1.2p1_2670F.1_g326610 Hydrangea macrophylla HOM05D000639 ORTHO05D004019 2.3e-33 146.0 107 67.3
PGR031G2129 Punica granatum HOM05D000639 ORTHO05D004019 2.3e-33 146.0 107 71.0
Solyc12g099560.2 Solanum lycopersicum HOM05D000639 ORTHO05D004019 3.0e-33 145.6 109 67.9
CARHR081540 Cardamine hirsuta HOM05D000639 ORTHO05D004019 3.9e-33 145.2 130 58.5
Oeu029702.2 Olea europaea HOM05D000639 ORTHO05D004019 3.9e-33 145.2 139 56.8
Duzib151G0063 Durio zibethinus HOM05D000639 ORTHO05D004019 5.1e-33 144.8 107 66.4
Solyc05g054240.3 Solanum lycopersicum HOM05D000639 ORTHO05D004019 5.1e-33 144.8 107 68.2
BolC7t44488H Brassica oleracea HOM05D000639 ORTHO05D004019 6.6e-33 144.4 130 56.9
Cc03_g01920 Coffea canephora HOM05D000639 ORTHO05D004019 6.6e-33 144.4 97 72.2
Sopen05g032730 Solanum pennellii HOM05D000639 ORTHO05D004019 6.6e-33 144.4 107 67.3
vmacro08153 Vaccinium macrocarpon HOM05D000639 ORTHO05D004019 8.6e-33 144.1 122 59.8
Sp2g19400 Schrenkiella parvula HOM05D000639 ORTHO05D004019 1.1e-32 143.7 130 58.5
Aa31LG5G17500 Aethionema arabicum HOM05D000639 ORTHO05D004019 1.5e-32 143.3 130 56.2
BcaC03g17691 Brassica carinata HOM05D000639 ORTHO05D004019 1.5e-32 143.3 107 63.6
C02p57000 Brassica napus HOM05D000639 ORTHO05D004019 1.5e-32 143.3 107 63.6
BolC2t11770H Brassica oleracea HOM05D000639 ORTHO05D004019 1.5e-32 143.3 107 63.6
Psat0s3456g0080 Pisum sativum HOM05D000639 ORTHO05D004019 1.5e-32 143.3 107 65.4
TWI09G1119 Tripterygium wilfordii HOM05D000639 ORTHO05D004019 1.5e-32 143.3 111 66.7
Sopen03g027930 Solanum pennellii HOM05D000639 ORTHO05D028406 1.9e-32 142.9 108 66.7
SGA_v2.0_scaffold147G36295 Striga asiatica HOM05D000639 ORTHO05D004019 1.9e-32 142.9 107 69.2
Haze_01200 Corylus avellana HOM05D000639 ORTHO05D004019 2.5e-32 142.5 110 67.3
Lalb_Chr13g0303571 Lupinus albus HOM05D000639 ORTHO05D004019 3.3e-32 142.1 109 61.5
Medtr4g119900 Medicago truncatula HOM05D000639 ORTHO05D004019 3.3e-32 142.1 107 63.6
Ca_21493_v3 Cicer arietinum L. HOM05D000639 ORTHO05D004019 4.3e-32 141.7 107 64.5
Glyma.15G148200 Glycine max HOM05D000639 ORTHO05D004019 5.6e-32 141.4 108 64.8
PGSC0003DMG400004710 Solanum tuberosum HOM05D000639 ORTHO05D004019 5.6e-32 141.4 109 67.9
arahy.Tifrunner.gnm1.ann1.KA48HN Arachis hypogaea HOM05D000639 ORTHO05D004019 9.5e-32 140.6 108 62.0
Cfa015385 Carpinus fangiana HOM05D000639 ORTHO05D004019 9.5e-32 140.6 109 65.1
Lalb_Chr15g0083501 Lupinus albus HOM05D000639 ORTHO05D004019 9.5e-32 140.6 108 67.6
unitig_748.g8732 Utricularia gibba HOM05D000639 ORTHO05D004019 1.2e-31 140.2 107 63.6
VMungo1309G0809 Vigna mungo HOM05D000639 ORTHO05D004019 1.2e-31 140.2 106 64.2
FAN12G1449 Fragaria x ananassa HOM05D000639 ORTHO05D004019 1.6e-31 139.8 99 71.7
Lalb_Chr12g0196591 Lupinus albus HOM05D000639 ORTHO05D004019 1.6e-31 139.8 109 61.5
Medtr2g436780 Medicago truncatula HOM05D000639 ORTHO05D004019 1.6e-31 139.8 110 60.9
Phvul.003G105500 Phaseolus vulgaris HOM05D000639 ORTHO05D004019 1.6e-31 139.8 106 65.1
Sp3g05880 Schrenkiella parvula HOM05D000639 ORTHO05D004019 1.6e-31 139.8 107 62.6
Sed0022843 Sechium edule HOM05D000639 ORTHO05D004019 1.6e-31 139.8 109 63.3
C07p39650 Brassica napus HOM05D000639 ORTHO05D004019 2.1e-31 139.4 107 62.6
Oeu027725.1 Olea europaea HOM05D000639 ORTHO05D004019 2.1e-31 139.4 87 79.3
arahy.Tifrunner.gnm1.ann1.LR2V9P Arachis hypogaea HOM05D000639 ORTHO05D004019 2.8e-31 139.0 108 61.1
BcaB07g34210 Brassica carinata HOM05D000639 ORTHO05D004019 2.8e-31 139.0 131 55.7
CsaV3_6G017170 Cucumis sativus L. HOM05D000639 ORTHO05D004019 2.8e-31 139.0 134 56.0
Gohir.D09G061400 Gossypium hirsutum HOM05D000639 ORTHO05D004019 2.8e-31 139.0 107 67.3
Potri.008G222700 Populus trichocarpa HOM05D000639 ORTHO05D004019 2.8e-31 139.0 109 63.3
Thhalv10020486m.g Eutrema salsugineum HOM05D000639 ORTHO05D004019 3.6e-31 138.7 108 64.8
Lj6g0003576 Lotus japonicus HOM05D000639 ORTHO05D004019 3.6e-31 138.7 108 62.0
AL3G18100 Arabidopsis lyrata HOM05D000639 ORTHO05D004019 4.7e-31 138.3 130 56.9
Lj6C675G15 Lonicera japonica HOM05D000639 ORTHO05D004019 4.7e-31 138.3 85 78.8
Rhsim04G0222300 Rhododendron simsii HOM05D000639 ORTHO05D004019 6.2e-31 137.9 120 60.0
TPR.G13846 Trifolium pratense HOM05D000639 ORTHO05D004019 6.2e-31 137.9 108 61.1
Carub.0003s0645 Capsella rubella HOM05D000639 ORTHO05D004019 8.1e-31 137.5 130 54.6
Ca_28415_v3 Cicer arietinum L. HOM05D000639 ORTHO05D004019 8.1e-31 137.5 108 62.0
Glyma.17G026500 Glycine max HOM05D000639 ORTHO05D004019 8.1e-31 137.5 107 60.7
CARHR286220 Cardamine hirsuta HOM05D000639 ORTHO05D004019 1.1e-30 137.1 107 63.6
MELO3C021330.2 Cucumis melo HOM05D000639 ORTHO05D004019 1.1e-30 137.1 134 55.2
Lj4g0016454 Lotus japonicus HOM05D000639 ORTHO05D004019 1.1e-30 137.1 107 60.7
Nn3g21443 Nelumbo nucifera HOM05D000639 ORTHO05D004019 1.4e-30 136.7 110 63.6
Glyma.09G044700 Glycine max HOM05D000639 ORTHO05D004019 1.8e-30 136.3 108 62.0
Lj3C819G5 Lonicera japonica HOM05D000639 ORTHO05D004019 2.4e-30 136.0 127 59.1
TPR.G3204 Trifolium pratense HOM05D000639 ORTHO05D004019 4.0e-30 135.2 107 61.7
Nn4g25839 Nelumbo nucifera HOM05D000639 ORTHO05D004019 5.2e-30 134.8 111 61.3
Carub.0008s0884 Capsella rubella HOM05D000639 ORTHO05D004019 8.9e-30 134.0 132 54.5
ClCG06G005130 Citrullus lanatus HOM05D000639 ORTHO05D004019 8.9e-30 134.0 108 61.1
Lj3C817G11 Lonicera japonica HOM05D000639 ORTHO05D004019 8.9e-30 134.0 127 58.3
Aqoxy2G02982 Aquilegia oxysepala HOM05D000639 ORTHO05D004019 1.5e-29 133.3 122 55.7
TAR365G0782 Trochodendron aralioides HOM05D000639 ORTHO05D004019 3.4e-29 132.1 109 61.5
Glyma.07G247300 Glycine max HOM05D000639 ORTHO05D004019 4.4e-29 131.7 107 59.8
Dinv29742 Davidia involucrata HOM05D000714 ORTHO05D000544 1.3e-28 130.2 107 65.4
AT5G49020 Arabidopsis thaliana HOM05D000639 ORTHO05D004019 2.9e-28 129.0 134 56.7
AL8G22390 Arabidopsis lyrata HOM05D000639 ORTHO05D004019 4.9e-28 128.3 132 55.3
PSO210G5853 Papaver somniferum HOM05D000639 ORTHO05D004019 4.9e-28 128.3 111 59.5
VMungo1215G1558 Vigna mungo HOM05D000639 ORTHO05D004019 8.4e-28 127.5 107 57.9
A06p38610 Brassica napus HOM05D000639 ORTHO05D004019 2.4e-27 125.9 121 54.5
BraA06t26776Z Brassica rapa HOM05D000639 ORTHO05D004019 2.4e-27 125.9 121 54.5
A05p41240 Brassica napus HOM05D000639 ORTHO05D004019 3.2e-27 125.6 107 60.7
Dinv44380 Davidia involucrata HOM05D000639 ORTHO05D004019 1.2e-26 123.6 107 61.7
MBI19_g29220_MAGBIO Magnolia biondii HOM05D000639 ORTHO05D004019 1.6e-26 123.2 110 60.9
BcaC05g29770 Brassica carinata HOM05D000639 ORTHO05D004019 2.1e-26 122.9 107 59.8
PSO302G0100 Papaver somniferum HOM05D000639 ORTHO05D004019 2.1e-26 122.9 108 59.3
BcaC05g29823 Brassica carinata HOM05D000639 ORTHO05D004019 4.6e-26 121.7 107 58.9
BolC5t34700H Brassica oleracea HOM05D000639 ORTHO05D004019 4.6e-26 121.7 107 58.9
C05p60460 Brassica napus HOM05D000639 ORTHO05D004019 7.8e-26 120.9 107 57.9
Actinidia14303 Actinidia chinensis HOM05D000639 ORTHO05D004019 1.3e-25 120.2 129 49.6
ATR0796G199 Amborella trichopoda HOM05D000639 ORTHO05D004019 1.7e-25 119.8 113 58.4
Sed0024544 Sechium edule HOM05D000639 ORTHO05D004019 1.7e-25 119.8 100 62.0
BraA05t22847Z Brassica rapa HOM05D000639 ORTHO05D004019 3.0e-25 119.0 107 60.7
Os07g0671700 Oryza sativa ssp. japonica HOM05D000639 ORTHO05D004019 8.7e-25 117.5 112 55.4
CDE08G1566 Ceratophyllum demersum HOM05D000639 ORTHO05D004019 1.5e-24 116.7 125 53.6
Zm00001eb330380 Zea mays HOM05D000639 ORTHO05D004019 3.3e-24 115.5 112 54.5
CDE02G3502 Ceratophyllum demersum HOM05D000639 ORTHO05D004019 5.6e-24 114.8 125 52.8
Zm00001eb111180 Zea mays HOM05D000639 ORTHO05D004019 8.1e-23 110.9 112 51.8
Sed0016171 Sechium edule HOM05D000639 ORTHO05D004019 1.5e-21 106.7 75 70.7
BcaC01g00537 Brassica carinata HOM05D000639 ORTHO05D004019 1.4e-19 100.1 95 56.8
C06p30940 Brassica napus HOM05D000517 ORTHO05D019904 5.4e-19 98.2 108 50.0
AagrBONN_evm.TU.Sc2ySwM_228.3515 Anthoceros agrestis HOM05D000639 ORTHO05D004019 9.3e-19 97.4 125 49.6
C03p41410 Brassica napus HOM05D000639 ORTHO05D004019 4.6e-18 95.1 98 53.1
HPP92_000402 Vanilla planifolia HOM05D000639 ORTHO05D004019 7.8e-18 94.4 107 48.6
PGSC0003DMG400008452 Solanum tuberosum HOM05D000639 ORTHO05D004019 8.7e-17 90.9 54 81.5
Pp3c1_7870 Physcomitrium patens HOM05D000639 ORTHO05D004019 1.4e-14 83.6 116 42.2
A07p06820 Brassica napus HOM05D000639 ORTHO05D019441 6.9e-14 81.3 55 72.7
BraA07t28472Z Brassica rapa HOM05D000639 ORTHO05D019441 6.9e-14 81.3 55 72.7
Actinidia00024 Actinidia chinensis HOM05D000639 ORTHO05D019441 9.0e-14 80.9 64 59.4
AUR62008114 Chenopodium quinoa HOM05D000639 ORTHO05D004019 2.0e-13 79.7 50 78.0
Ah.04g164890 Amaranthus hybridus HOM05D000639 ORTHO05D004019 2.6e-13 79.3 50 76.0
Pp3c11_14160 Physcomitrium patens HOM05D000639 ORTHO05D004019 2.6e-13 79.3 114 38.6
Actinidia12344 Actinidia chinensis HOM05D003013 ORTHO05D003460 7.6e-13 77.8 51 74.5
DCAR_023284 Daucus carota HOM05D000639 ORTHO05D004019 7.6e-13 77.8 75 53.3
SMO118G0363 Selaginella moellendorffii HOM05D000639 ORTHO05D004019 7.6e-13 77.8 50 78.0
FAN07G2352 Fragaria x ananassa HOM05D000639 ORTHO05D005322 1.9e-11 73.2 60 60.0
CSS0045829 Camellia sinensis var. sinensis HOM05D000639 ORTHO05D028406 4.2e-11 72.0 56 57.1
Actinidia08474 Actinidia chinensis HOM05D000639 ORTHO05D052910 6.0e-10 68.2 45 71.1
CBR_g3614 Chara braunii HOM05D000639 ORTHO05D004019 5.1e-09 65.1 71 52.1
Peaxi162Scf00576g00012 Petunia axillaris HOM05D000639 ORTHO05D028406 5.1e-09 65.1 75 48.0
Sc13g0003460 Simmondsia chinensis HOM05D000639 ORTHO05D004019 8.7e-09 64.3 108 35.2
Cre15.g635350 Chlamydomonas reinhardtii HOM05D000639 ORTHO05D004019 3.1e-06 55.8 36 66.7


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