Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0240161 Helianthus annuus HOM05D003964 ORTHO05D000174 2.8e-97 358.6 182 100.0
HanXRQChr05g0160951 Helianthus annuus HOM05D003964 ORTHO05D000174 9.5e-45 184.1 140 67.1
HanXRQChr17g0567981 Helianthus annuus HOM05D003964 ORTHO05D000174 2.1e-44 183.0 138 68.1
HanXRQChr01g0021371 Helianthus annuus HOM05D003964 ORTHO05D000174 4.7e-44 181.8 138 67.4
HanXRQChr04g0101601 Helianthus annuus HOM05D003964 ORTHO05D000174 6.2e-44 181.4 134 70.1
HanXRQChr15g0487781 Helianthus annuus HOM05D003964 ORTHO05D000174 1.1e-43 180.6 138 66.7
HanXRQChr08g0219171 Helianthus annuus HOM05D003964 ORTHO05D000174 1.4e-43 180.3 140 64.3
HanXRQChr09g0254941 Helianthus annuus HOM05D003964 ORTHO05D000174 3.1e-43 179.1 135 69.6
HanXRQChr01g0013421 Helianthus annuus HOM05D003964 ORTHO05D000174 1.2e-42 177.2 135 68.1
HanXRQChr05g0155711 Helianthus annuus HOM05D003964 ORTHO05D000174 4.4e-42 175.3 135 67.4
HanXRQChr07g0205571 Helianthus annuus HOM05D003964 ORTHO05D000174 4.4e-42 175.3 138 65.9
HanXRQChr13g0398071 Helianthus annuus HOM05D003964 ORTHO05D000174 3.5e-39 165.6 134 64.9
HanXRQChr01g0015091 Helianthus annuus HOM05D003964 ORTHO05D000174 4.6e-39 165.2 134 64.9
HanXRQChr03g0062081 Helianthus annuus HOM05D003964 ORTHO05D000174 5.1e-38 161.8 127 66.1
HanXRQChr17g0554621 Helianthus annuus HOM05D003964 ORTHO05D000174 8.6e-38 161.0 102 80.4
HanXRQChr05g0145471 Helianthus annuus HOM05D003964 ORTHO05D000174 2.5e-37 159.5 134 63.4
HanXRQChr15g0490181 Helianthus annuus HOM05D003964 ORTHO05D000174 3.3e-37 159.1 145 59.3
HanXRQChr02g0039491 Helianthus annuus HOM05D003964 ORTHO05D002376 8.9e-35 151.0 102 74.5
HanXRQChr16g0520611 Helianthus annuus HOM05D000096 ORTHO05D000045 4.9e-33 145.2 92 79.3
HanXRQChr13g0387501 Helianthus annuus HOM05D003964 ORTHO05D000174 9.6e-21 104.4 136 39.7
HanXRQChr09g0260381 Helianthus annuus HOM05D003964 ORTHO05D000174 8.1e-20 101.3 66 74.2
HanXRQChr13g0403861 Helianthus annuus HOM05D003964 ORTHO05D000174 1.1e-19 100.9 134 40.3
HanXRQChr14g0436911 Helianthus annuus HOM05D003964 ORTHO05D000174 1.1e-19 100.9 134 40.3
HanXRQChr04g0122921 Helianthus annuus HOM05D003964 ORTHO05D000174 1.4e-19 100.5 65 73.8
HanXRQChr08g0230241 Helianthus annuus HOM05D003964 ORTHO05D000174 2.4e-19 99.8 142 38.0
HanXRQChr06g0179651 Helianthus annuus HOM05D003964 ORTHO05D000174 1.2e-18 97.4 142 37.3
Lsat_1_v5_gn_7_47140 Lactuca sativa HOM05D007823 ORTHO05D000174 1.4e-16 90.5 138 40.6
HanXRQChr08g0227821 Helianthus annuus HOM05D007823 ORTHO05D000174 7.1e-16 88.2 117 39.3
HanXRQChr14g0452311 Helianthus annuus HOM05D003964 ORTHO05D000174 1.2e-15 87.4 144 34.7
HanXRQChr15g0471541 Helianthus annuus HOM05D003964 ORTHO05D000174 3.5e-15 85.9 117 38.5
HanXRQChr12g0361281 Helianthus annuus HOM05D003964 ORTHO05D000174 6.0e-15 85.1 145 35.2
Lsat_1_v5_gn_6_56620 Lactuca sativa HOM05D007823 ORTHO05D000174 7.9e-15 84.7 138 38.4
HanXRQChr13g0392821 Helianthus annuus HOM05D003964 ORTHO05D000174 1.0e-14 84.3 142 34.5
HanXRQChr15g0464461 Helianthus annuus HOM05D003964 ORTHO05D000174 1.0e-14 84.3 117 37.6
HanXRQChr03g0084461 Helianthus annuus HOM05D003964 ORTHO05D000174 1.3e-14 84.0 142 35.9
HanXRQChr09g0257401 Helianthus annuus HOM05D003964 ORTHO05D000174 2.3e-14 83.2 140 37.1
HanXRQChr15g0463841 Helianthus annuus HOM05D000353 ORTHO05D000174 2.3e-14 83.2 142 34.5
Lsat_1_v5_gn_9_50581 Lactuca sativa HOM05D007823 ORTHO05D000174 3.0e-14 82.8 117 38.5
HanXRQChr02g0048441 Helianthus annuus HOM05D003964 ORTHO05D000174 3.9e-14 82.4 73 60.3
HanXRQChr05g0143541 Helianthus annuus HOM05D003964 ORTHO05D000174 8.7e-14 81.3 112 39.3
HanXRQChr11g0325941 Helianthus annuus HOM05D003964 ORTHO05D000174 1.1e-13 80.9 135 34.1
Lsat_1_v5_gn_3_80740 Lactuca sativa HOM05D007823 ORTHO05D000174 1.9e-13 80.1 132 34.8
Lsat_1_v5_gn_9_54340 Lactuca sativa HOM05D007823 ORTHO05D000174 1.9e-13 80.1 130 37.7
HanXRQChr14g0428201 Helianthus annuus HOM05D003964 ORTHO05D000174 2.5e-13 79.7 117 36.8
Lsat_1_v5_gn_3_125861 Lactuca sativa HOM05D007823 ORTHO05D000174 2.5e-13 79.7 132 35.6
Lsat_1_v5_gn_8_29300 Lactuca sativa HOM05D007823 ORTHO05D000174 2.5e-13 79.7 132 35.6
HanXRQChr13g0412841 Helianthus annuus HOM05D003964 ORTHO05D000174 5.6e-13 78.6 132 35.6
Lsat_1_v5_gn_5_188581 Lactuca sativa HOM05D007823 ORTHO05D000174 2.8e-12 76.3 132 34.8
ECA248G0798 Erigeron canadensis HOM05D003964 ORTHO05D000174 3.6e-12 75.9 105 36.2
ECA238G1979 Erigeron canadensis HOM05D003964 ORTHO05D000174 4.8e-12 75.5 105 36.2
HanXRQChr01g0006401 Helianthus annuus HOM05D003964 ORTHO05D000174 6.2e-12 75.1 46 73.9
Lsat_1_v5_gn_0_24061 Lactuca sativa HOM05D007823 ORTHO05D000174 8.1e-12 74.7 111 39.6
ECA238G2764 Erigeron canadensis HOM05D003964 ORTHO05D002376 1.1e-11 74.3 97 36.1
ECA248G2532 Erigeron canadensis HOM05D003964 ORTHO05D000174 1.1e-11 74.3 104 37.5
ECA234G0608 Erigeron canadensis HOM05D000615 ORTHO05D000447 1.4e-11 73.9 110 36.4
HanXRQChr02g0036801 Helianthus annuus HOM05D003964 ORTHO05D000174 1.4e-11 73.9 46 71.7
Lsat_1_v5_gn_1_124241 Lactuca sativa HOM05D007823 ORTHO05D000174 1.4e-11 73.9 114 30.7
Lsat_1_v5_gn_6_67080 Lactuca sativa HOM05D007823 ORTHO05D000174 1.8e-11 73.6 113 35.4
ECA238G0067 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.1e-11 72.8 91 37.4
Lsat_1_v5_gn_1_13461 Lactuca sativa HOM05D007823 ORTHO05D000174 3.1e-11 72.8 136 34.6
ECA240G2532 Erigeron canadensis HOM05D003964 ORTHO05D000174 4.0e-11 72.4 104 36.5
ECA246G2956 Erigeron canadensis HOM05D000353 ORTHO05D000174 6.9e-11 71.6 97 36.1
Lsat_1_v5_gn_4_105340 Lactuca sativa HOM05D007823 ORTHO05D000174 6.9e-11 71.6 114 33.3
ECA236G2182 Erigeron canadensis HOM05D000353 ORTHO05D000174 9.0e-11 71.2 97 35.1
Lsat_1_v5_gn_4_174001 Lactuca sativa HOM05D024279 ORTHO05D000174 9.0e-11 71.2 92 38.0
ECA232G3959 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.2e-10 70.9 114 33.3
ECA233G1394 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.2e-10 70.9 111 30.6
ECA233G1400 Erigeron canadensis HOM05D003964 ORTHO05D000174 1.2e-10 70.9 110 33.6
ECA233G5850 Erigeron canadensis HOM05D003964 ORTHO05D002376 1.5e-10 70.5 97 35.1
ECA240G1473 Erigeron canadensis HOM05D000353 ORTHO05D000174 2.0e-10 70.1 97 35.1
ECA236G4996 Erigeron canadensis HOM05D000096 ORTHO05D000045 3.4e-10 69.3 94 36.2
Lsat_1_v5_gn_1_29140 Lactuca sativa HOM05D007823 ORTHO05D000174 3.4e-10 69.3 115 36.5
Lsat_1_v5_gn_6_53701 Lactuca sativa HOM05D000071 ORTHO05D000029 3.4e-10 69.3 136 33.1
ECA233G1381 Erigeron canadensis HOM05D000096 ORTHO05D000045 4.5e-10 68.9 101 36.6
ECA234G0749 Erigeron canadensis HOM05D003964 ORTHO05D002376 4.5e-10 68.9 121 32.2
ECA232G0261 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.6e-10 68.2 91 36.3
ECA234G2462 Erigeron canadensis HOM05D000096 ORTHO05D000045 7.6e-10 68.2 121 32.2
ECA248G1544 Erigeron canadensis HOM05D000096 ORTHO05D000045 7.6e-10 68.2 140 33.6
Lsat_1_v5_gn_9_75581 Lactuca sativa HOM05D007823 ORTHO05D000174 7.6e-10 68.2 136 33.1
HanXRQChr13g0404371 Helianthus annuus HOM05D003964 ORTHO05D000174 9.9e-10 67.8 95 41.1
Lsat_1_v5_gn_4_174021 Lactuca sativa HOM05D007823 ORTHO05D000174 9.9e-10 67.8 114 28.9
ECA233G2326 Erigeron canadensis HOM05D000046 ORTHO05D000195 1.3e-09 67.4 110 40.0
Lsat_1_v5_gn_4_132180 Lactuca sativa HOM05D007823 ORTHO05D000174 2.2e-09 66.6 117 37.6
ECA248G0780 Erigeron canadensis HOM05D000353 ORTHO05D000174 2.9e-09 66.2 110 32.7
HanXRQChr11g0346681 Helianthus annuus HOM05D003964 ORTHO05D000174 3.8e-09 65.9 104 28.8
Lsat_1_v5_gn_2_46441 Lactuca sativa HOM05D002730 ORTHO05D011082 3.8e-09 65.9 94 38.3
Lsat_1_v5_gn_3_140020 Lactuca sativa HOM05D007823 ORTHO05D000174 4.9e-09 65.5 104 30.8
Lsat_1_v5_gn_7_86861 Lactuca sativa HOM05D007823 ORTHO05D000174 4.9e-09 65.5 95 32.6
ECA234G1666 Erigeron canadensis HOM05D000096 ORTHO05D000045 6.4e-09 65.1 88 35.2
Lsat_1_v5_gn_5_68480 Lactuca sativa HOM05D007823 ORTHO05D000174 6.4e-09 65.1 115 35.7
Ah.08g214270 Amaranthus hybridus HOM05D003964 ORTHO05D000174 8.4e-09 64.7 101 36.6
HanXRQChr00c0635g0576641 Helianthus annuus HOM05D003964 ORTHO05D000174 8.4e-09 64.7 105 38.1
Lsat_1_v5_gn_4_43181 Lactuca sativa HOM05D007823 ORTHO05D000174 8.4e-09 64.7 100 33.0
Ah.02g127010 Amaranthus hybridus HOM05D000012 ORTHO05D001936 1.1e-08 64.3 95 37.9
HanXRQChr10g0290091 Helianthus annuus HOM05D003964 ORTHO05D000174 1.1e-08 64.3 145 31.0
Lsat_1_v5_gn_1_81940 Lactuca sativa HOM05D007823 ORTHO05D000174 1.4e-08 63.9 115 33.0
Lsat_1_v5_gn_8_54441 Lactuca sativa HOM05D007823 ORTHO05D000174 1.4e-08 63.9 115 33.0
ECA233G3201 Erigeron canadensis HOM05D000353 ORTHO05D000174 1.9e-08 63.5 117 31.6
ECA314G0002 Erigeron canadensis HOM05D003964 ORTHO05D000174 1.9e-08 63.5 75 37.3
Lsat_1_v5_gn_2_35760 Lactuca sativa HOM05D007823 ORTHO05D000174 1.9e-08 63.5 116 34.5
HanXRQChr13g0400781 Helianthus annuus HOM05D003964 ORTHO05D000174 2.4e-08 63.2 95 40.0
ECA240G4108 Erigeron canadensis HOM05D003964 ORTHO05D002376 3.2e-08 62.8 91 34.1
Nitab4.5_0000928g0130 Nicotiana tabacum HOM05D002441 ORTHO05D002376 5.5e-08 62.0 121 36.4
Lsat_1_v5_gn_6_24100 Lactuca sativa HOM05D009063 ORTHO05D011082 7.1e-08 61.6 93 35.5
Lsat_1_v5_gn_8_23420 Lactuca sativa HOM05D007823 ORTHO05D000174 9.3e-08 61.2 137 33.6
HanXRQChr10g0302731 Helianthus annuus HOM05D003964 ORTHO05D000174 1.2e-07 60.8 95 37.9
Lsat_1_v5_gn_3_131701 Lactuca sativa HOM05D009063 ORTHO05D011082 1.6e-07 60.5 94 35.1
HanXRQChr07g0201541 Helianthus annuus HOM05D003964 ORTHO05D000174 2.1e-07 60.1 112 35.7
ECA233G0025 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.7e-07 59.7 93 37.6
ECA246G4199 Erigeron canadensis HOM05D003964 ORTHO05D011082 2.7e-07 59.7 117 34.2
BcaC05g25301 Brassica carinata HOM05D011161 ORTHO05D012637 3.5e-07 59.3 120 32.5
BolC5t29929H Brassica oleracea HOM05D011161 ORTHO05D012637 3.5e-07 59.3 120 32.5
Lsat_1_v5_gn_6_53641 Lactuca sativa HOM05D009063 ORTHO05D011082 3.5e-07 59.3 94 35.1
ECA238G3619 Erigeron canadensis HOM05D000353 ORTHO05D000174 4.6e-07 58.9 151 32.5
HanXRQChr03g0063491 Helianthus annuus HOM05D003964 ORTHO05D000174 4.6e-07 58.9 112 34.8
ECA233G2538 Erigeron canadensis HOM05D009063 ORTHO05D011082 6.0e-07 58.5 107 35.5
HanXRQChr09g0260311 Helianthus annuus HOM05D000353 ORTHO05D000174 6.0e-07 58.5 91 27.5
Lsat_1_v5_gn_8_159921 Lactuca sativa HOM05D009063 ORTHO05D011082 6.0e-07 58.5 94 34.0
ECA233G0385 Erigeron canadensis HOM05D000353 ORTHO05D000174 7.9e-07 58.2 83 36.1
Lsat_1_v5_gn_4_63501 Lactuca sativa HOM05D007823 ORTHO05D000174 7.9e-07 58.2 108 33.3
ECA246G4325 Erigeron canadensis HOM05D000353 ORTHO05D000174 1.0e-06 57.8 130 30.8
Ah.05g177210 Amaranthus hybridus HOM05D003964 ORTHO05D000174 1.3e-06 57.4 89 36.0
ECA246G1889 Erigeron canadensis HOM05D003964 ORTHO05D002376 1.3e-06 57.4 90 32.2
C07p16110 Brassica napus HOM05D009574 ORTHO05D012637 2.3e-06 56.6 102 33.3
ECA233G1973 Erigeron canadensis HOM05D000353 ORTHO05D000174 3.0e-06 56.2 95 37.9
ECA247G4094 Erigeron canadensis HOM05D000353 ORTHO05D000174 5.1e-06 55.5 130 30.0
Nitab4.5_0015899g0010 Nicotiana tabacum HOM05D002441 ORTHO05D002376 5.1e-06 55.5 99 35.4
Nitab4.5_0000970g0060 Nicotiana tabacum HOM05D002441 ORTHO05D002376 6.7e-06 55.1 114 32.5
ECA238G2404 Erigeron canadensis HOM05D000353 ORTHO05D000174 8.7e-06 54.7 79 34.2
ECA246G3753 Erigeron canadensis HOM05D003964 ORTHO05D000174 8.7e-06 54.7 95 32.6
Lsat_1_v5_gn_4_64681 Lactuca sativa HOM05D007823 ORTHO05D000174 8.7e-06 54.7 73 42.5


User provided reference genes

Program Settings