Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0240101 Helianthus annuus HOM05D012280 ORTHO05D012378 3.9e-100 369.8 574 100.0
HanXRQChr09g0239731 Helianthus annuus HOM05D000005 ORTHO05D000012 3.8e-39 167.2 158 57.0
HanXRQChr09g0240561 Helianthus annuus HOM05D012280 ORTHO05D012378 3.0e-36 157.5 157 54.1
HanXRQChr09g0240341 Helianthus annuus HOM05D012280 ORTHO05D012378 5.1e-36 156.8 171 49.7
HanXRQChr09g0239251 Helianthus annuus HOM05D000005 ORTHO05D000012 6.7e-36 156.4 168 53.0
HanXRQChr09g0240841 Helianthus annuus HOM05D000005 ORTHO05D000012 6.7e-36 156.4 169 49.7
HanXRQChr09g0239471 Helianthus annuus HOM05D012280 ORTHO05D012378 1.1e-35 155.6 145 55.9
HanXRQChr09g0240261 Helianthus annuus HOM05D000005 ORTHO05D012378 1.1e-35 155.6 157 54.1
HanXRQChr17g0570631 Helianthus annuus HOM05D012280 ORTHO05D012378 2.5e-35 154.5 171 48.5
HanXRQChr09g0239531 Helianthus annuus HOM05D000005 ORTHO05D000012 1.3e-34 152.1 161 51.6
HanXRQChr03g0077081 Helianthus annuus HOM05D012280 ORTHO05D012378 4.8e-34 150.2 186 45.2
HanXRQChr09g0239431 Helianthus annuus HOM05D000005 ORTHO05D000012 6.3e-34 149.8 164 50.6
HanXRQChr09g0239991 Helianthus annuus HOM05D000005 ORTHO05D000012 8.2e-34 149.4 171 48.0
HanXRQChr13g0396521 Helianthus annuus HOM05D000005 ORTHO05D000012 2.4e-33 147.9 167 48.5
Lsat_1_v5_gn_4_150441 Lactuca sativa HOM05D000005 ORTHO05D000012 3.1e-33 147.5 169 45.6
Lsat_1_v5_gn_9_90700 Lactuca sativa HOM05D000005 ORTHO05D000012 4.1e-33 147.1 170 48.8
Lsat_1_v5_gn_4_111140 Lactuca sativa HOM05D000005 ORTHO05D000012 3.8e-31 140.6 170 48.8
Lsat_1_v5_gn_9_91400 Lactuca sativa HOM05D000005 ORTHO05D000012 8.5e-31 139.4 171 47.4
ECA240G0669 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.1e-30 139.0 160 48.1
Lsat_1_v5_gn_4_150681 Lactuca sativa HOM05D000005 ORTHO05D000012 1.1e-30 139.0 161 48.4
HanXRQChr09g0239441 Helianthus annuus HOM05D012280 ORTHO05D012378 1.4e-30 138.7 186 46.2
Lsat_1_v5_gn_4_144921 Lactuca sativa HOM05D000005 ORTHO05D000012 1.4e-30 138.7 172 45.3
ECA240G2019 Erigeron canadensis HOM05D000005 ORTHO05D000012 2.7e-29 134.4 158 46.2
Lsat_1_v5_gn_9_14781 Lactuca sativa HOM05D000005 ORTHO05D000012 3.6e-29 134.0 162 48.1
Lsat_1_v5_gn_5_38020 Lactuca sativa HOM05D000005 ORTHO05D000012 1.4e-28 132.1 124 52.4
Lsat_1_v5_gn_5_39581 Lactuca sativa HOM05D000005 ORTHO05D000012 1.4e-28 132.1 118 55.1
Lsat_1_v5_gn_8_82140 Lactuca sativa HOM05D000005 ORTHO05D000012 2.3e-28 131.3 163 46.0
Lsat_1_v5_gn_9_91461 Lactuca sativa HOM05D000005 ORTHO05D000012 2.3e-28 131.3 167 44.9
Lsat_1_v5_gn_4_148180 Lactuca sativa HOM05D012280 ORTHO05D012378 5.1e-28 130.2 190 41.6
Lsat_1_v5_gn_4_150641 Lactuca sativa HOM05D000005 ORTHO05D000012 5.1e-28 130.2 169 46.2
Lsat_1_v5_gn_4_147480 Lactuca sativa HOM05D000005 ORTHO05D000012 1.5e-27 128.6 171 44.4
Lsat_1_v5_gn_4_150561 Lactuca sativa HOM05D000005 ORTHO05D000012 2.0e-27 128.3 161 46.6
Lsat_1_v5_gn_5_38001 Lactuca sativa HOM05D000005 ORTHO05D000012 3.3e-27 127.5 114 55.3
Lsat_1_v5_gn_5_39440 Lactuca sativa HOM05D000005 ORTHO05D000012 4.4e-27 127.1 161 47.2
Lsat_1_v5_gn_5_39460 Lactuca sativa HOM05D000005 ORTHO05D000012 7.4e-27 126.3 166 42.8
ECA240G4241 Erigeron canadensis HOM05D000005 ORTHO05D000012 9.7e-27 125.9 171 41.5
Lsat_1_v5_gn_4_148200 Lactuca sativa HOM05D000005 ORTHO05D000012 2.2e-26 124.8 168 42.9
HanXRQChr03g0077121 Helianthus annuus HOM05D012280 ORTHO05D012378 4.8e-26 123.6 164 44.5
Lsat_1_v5_gn_4_150461 Lactuca sativa HOM05D000005 ORTHO05D000012 1.1e-25 122.5 169 45.0
Lsat_1_v5_gn_9_91840 Lactuca sativa HOM05D000005 ORTHO05D000012 6.9e-25 119.8 172 41.3
Lsat_1_v5_gn_9_91880 Lactuca sativa HOM05D000005 ORTHO05D000012 9.1e-25 119.4 166 41.0
Lsat_1_v5_gn_4_37921 Lactuca sativa HOM05D000005 ORTHO05D000012 1.5e-24 118.6 183 38.8
Lsat_1_v5_gn_4_148360 Lactuca sativa HOM05D000005 ORTHO05D000012 2.0e-24 118.2 168 38.7
Lsat_1_v5_gn_9_91940 Lactuca sativa HOM05D000005 ORTHO05D000012 3.4e-24 117.5 166 44.0
HanXRQChr09g0240011 Helianthus annuus HOM05D000005 ORTHO05D000012 1.0e-23 115.9 120 50.8
Lsat_1_v5_gn_4_37841 Lactuca sativa HOM05D000005 ORTHO05D000012 1.0e-23 115.9 182 38.5
Lsat_1_v5_gn_4_150501 Lactuca sativa HOM05D000005 ORTHO05D012378 2.2e-23 114.8 160 41.9
Lsat_1_v5_gn_4_148140 Lactuca sativa HOM05D000005 ORTHO05D000012 5.0e-23 113.6 113 53.1
ECA240G2018 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.2e-22 110.5 141 45.4
Lsat_1_v5_gn_4_37821 Lactuca sativa HOM05D000005 ORTHO05D000012 4.7e-21 107.1 192 39.1
Lsat_1_v5_gn_8_40680 Lactuca sativa HOM05D000005 ORTHO05D000012 3.9e-20 104.0 183 36.6
Lsat_1_v5_gn_4_150621 Lactuca sativa HOM05D000005 ORTHO05D000012 1.5e-19 102.1 184 37.0
HanXRQChr09g0237651 Helianthus annuus HOM05D012280 ORTHO05D012378 4.4e-19 100.5 76 67.1
HanXRQChr09g0239271 Helianthus annuus HOM05D012280 ORTHO05D012378 1.3e-18 99.0 121 45.5
ECA240G2185 Erigeron canadensis HOM05D000005 ORTHO05D000012 2.2e-18 98.2 159 37.7
Lsat_1_v5_gn_4_147380 Lactuca sativa HOM05D000005 ORTHO05D000012 3.5e-16 90.9 158 39.2
HanXRQChr09g0237661 Helianthus annuus HOM05D012280 ORTHO05D225755 3.8e-15 87.4 88 55.7
Lsat_1_v5_gn_4_37901 Lactuca sativa HOM05D000005 ORTHO05D000012 5.0e-15 87.0 183 33.9
HanXRQChr04g0098511 Helianthus annuus HOM05D000005 ORTHO05D000012 8.5e-15 86.3 151 36.4
ECA240G0167 Erigeron canadensis HOM05D012131 ORTHO05D015641 4.2e-14 84.0 152 39.5
Lsat_1_v5_gn_9_92740 Lactuca sativa HOM05D000005 ORTHO05D000012 9.4e-14 82.8 108 38.9
HanXRQChr10g0317141 Helianthus annuus HOM05D000005 ORTHO05D000012 2.7e-13 81.3 152 35.5
Lsat_1_v5_gn_2_32820 Lactuca sativa HOM05D000005 ORTHO05D000012 8.0e-13 79.7 179 33.5
HanXRQChr04g0098371 Helianthus annuus HOM05D000005 ORTHO05D012378 4.0e-12 77.4 151 34.4
Lsat_1_v5_gn_4_145880 Lactuca sativa HOM05D000005 ORTHO05D019004 5.2e-12 77.0 170 32.9
HanXRQChr04g0098911 Helianthus annuus HOM05D000005 ORTHO05D000012 6.7e-12 76.6 159 32.7
HanXRQChr16g0521751 Helianthus annuus HOM05D000005 ORTHO05D012378 6.7e-12 76.6 184 31.5
HanXRQChr04g0098541 Helianthus annuus HOM05D000005 ORTHO05D000012 8.8e-12 76.3 158 34.2
Lsat_1_v5_gn_9_92681 Lactuca sativa HOM05D000005 ORTHO05D000012 8.8e-12 76.3 104 33.7
HanXRQChr16g0522521 Helianthus annuus HOM05D000005 ORTHO05D000012 2.6e-11 74.7 185 33.0
Lsat_1_v5_gn_9_92980 Lactuca sativa HOM05D000005 ORTHO05D000012 2.6e-11 74.7 104 40.4
Lsat_1_v5_gn_9_93340 Lactuca sativa HOM05D000005 ORTHO05D000012 2.6e-11 74.7 107 39.3
HanXRQChr04g0098851 Helianthus annuus HOM05D000005 ORTHO05D012378 7.5e-11 73.2 159 32.7
HanXRQChr04g0098661 Helianthus annuus HOM05D000005 ORTHO05D000012 1.7e-10 72.0 153 33.3
Lsat_1_v5_gn_5_159861 Lactuca sativa HOM05D000005 ORTHO05D036373 1.1e-09 69.3 109 35.8
HanXRQChr04g0098741 Helianthus annuus HOM05D000005 ORTHO05D012378 2.4e-09 68.2 153 32.0
HanXRQChr04g0098561 Helianthus annuus HOM05D000005 ORTHO05D000012 5.3e-09 67.0 154 31.8
HanXRQChr04g0098761 Helianthus annuus HOM05D000005 ORTHO05D000012 1.2e-08 65.9 159 31.4
Lsat_1_v5_gn_4_148261 Lactuca sativa HOM05D000005 ORTHO05D000012 1.6e-08 65.5 83 50.6
HanXRQChr04g0098501 Helianthus annuus HOM05D000005 ORTHO05D019004 2.7e-08 64.7 131 32.8
RcHm_v2.0_Chr6g0251641 Rosa chinensis HOM05D000005 ORTHO05D000012 2.7e-08 64.7 176 29.0
Lsat_1_v5_gn_2_17301 Lactuca sativa HOM05D000005 ORTHO05D000012 7.7e-08 63.2 176 30.1
Lsat_1_v5_gn_5_27220 Lactuca sativa HOM05D000005 ORTHO05D000012 7.7e-08 63.2 176 30.1
Lsat_1_v5_gn_2_25361 Lactuca sativa HOM05D000005 ORTHO05D000012 2.2e-07 61.6 115 34.8
QL11p020601 Quercus lobata HOM05D000005 ORTHO05D000012 3.8e-07 60.8 178 28.1
Prupe.8G032100 Prunus persica HOM05D000005 ORTHO05D000012 8.5e-07 59.7 173 30.1
FAN10G2256 Fragaria x ananassa HOM05D000005 ORTHO05D000012 7.2e-06 56.6 196 28.1
QL93p2002_0022 Quercus lobata HOM05D000005 ORTHO05D000012 7.2e-06 56.6 164 28.7


User provided reference genes

Program Settings