Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0240081 Helianthus annuus HOM05D025036 ORTHO05D221687 1.1e-65 255.0 471 100.0
HanXRQChr17g0570661 Helianthus annuus HOM05D025036 ORTHO05D220866 1.3e-32 145.2 192 90.6
HanXRQChr09g0239431 Helianthus annuus HOM05D000005 ORTHO05D000012 5.2e-18 96.7 226 49.6
HanXRQChr09g0239251 Helianthus annuus HOM05D000005 ORTHO05D000012 3.4e-17 94.0 223 52.5
HanXRQChr17g0570631 Helianthus annuus HOM05D012280 ORTHO05D012378 4.4e-17 93.6 222 74.3
ECA240G0669 Erigeron canadensis HOM05D000005 ORTHO05D000012 3.7e-16 90.5 211 51.7
HanXRQChr09g0240341 Helianthus annuus HOM05D012280 ORTHO05D012378 1.8e-15 88.2 222 73.9
HanXRQChr03g0077081 Helianthus annuus HOM05D012280 ORTHO05D012378 7.0e-15 86.3 209 49.3
HanXRQChr09g0239531 Helianthus annuus HOM05D000005 ORTHO05D000012 4.5e-14 83.6 223 59.2
HanXRQChr09g0239701 Helianthus annuus HOM05D000005 ORTHO05D000012 1.0e-13 82.4 199 51.8
HanXRQChr09g0239191 Helianthus annuus HOM05D012280 ORTHO05D012378 1.7e-13 81.6 191 52.9
HanXRQChr03g0077121 Helianthus annuus HOM05D012280 ORTHO05D012378 2.5e-12 77.8 198 50.0
HanXRQChr13g0396521 Helianthus annuus HOM05D000005 ORTHO05D000012 4.2e-12 77.0 210 71.0
HanXRQChr09g0237661 Helianthus annuus HOM05D012280 ORTHO05D225755 6.1e-11 73.2 211 73.9
Lsat_1_v5_gn_8_82140 Lactuca sativa HOM05D000005 ORTHO05D000012 1.0e-10 72.4 64 64.1
HanXRQChr09g0239731 Helianthus annuus HOM05D000005 ORTHO05D000012 1.4e-10 72.0 65 61.5
Lsat_1_v5_gn_4_150641 Lactuca sativa HOM05D000005 ORTHO05D000012 1.8e-10 71.6 64 65.6
ECA240G2018 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.0e-10 70.9 89 57.3
HanXRQChr09g0239551 Helianthus annuus HOM05D000005 ORTHO05D000012 5.2e-10 70.1 221 70.1
HanXRQChr09g0239441 Helianthus annuus HOM05D012280 ORTHO05D012378 6.8e-10 69.7 226 53.1
Lsat_1_v5_gn_4_148200 Lactuca sativa HOM05D000005 ORTHO05D000012 1.2e-09 68.9 64 62.5
HanXRQChr09g0240561 Helianthus annuus HOM05D012280 ORTHO05D012378 1.5e-09 68.6 46 69.6
HanXRQChr09g0237651 Helianthus annuus HOM05D012280 ORTHO05D012378 2.0e-09 68.2 64 60.9
Lsat_1_v5_gn_5_39460 Lactuca sativa HOM05D000005 ORTHO05D000012 2.6e-09 67.8 64 59.4
HanXRQChr09g0240261 Helianthus annuus HOM05D000005 ORTHO05D012378 3.4e-09 67.4 63 61.9
Lsat_1_v5_gn_4_147380 Lactuca sativa HOM05D000005 ORTHO05D000012 5.7e-09 66.6 82 52.4
HanXRQChr09g0239201 Helianthus annuus HOM05D012280 ORTHO05D226855 1.3e-08 65.5 53 54.7
Lsat_1_v5_gn_9_91400 Lactuca sativa HOM05D000005 ORTHO05D000012 1.3e-08 65.5 64 60.9
Lsat_1_v5_gn_5_39581 Lactuca sativa HOM05D000005 ORTHO05D000012 2.8e-08 64.3 64 59.4
ECA240G2019 Erigeron canadensis HOM05D000005 ORTHO05D000012 6.3e-08 63.2 52 67.3
Lsat_1_v5_gn_4_111140 Lactuca sativa HOM05D000005 ORTHO05D000012 8.3e-08 62.8 64 60.9
Lsat_1_v5_gn_9_91461 Lactuca sativa HOM05D000005 ORTHO05D000012 1.1e-07 62.4 64 59.4
Lsat_1_v5_gn_4_144921 Lactuca sativa HOM05D000005 ORTHO05D000012 1.4e-07 62.0 64 59.4
Lsat_1_v5_gn_4_150621 Lactuca sativa HOM05D000005 ORTHO05D000012 1.4e-07 62.0 63 58.7
Lsat_1_v5_gn_4_147480 Lactuca sativa HOM05D000005 ORTHO05D000012 2.4e-07 61.2 82 47.6
Lsat_1_v5_gn_4_150441 Lactuca sativa HOM05D000005 ORTHO05D000012 3.1e-07 60.8 64 56.2
Lsat_1_v5_gn_9_90700 Lactuca sativa HOM05D000005 ORTHO05D000012 3.1e-07 60.8 49 61.2
Lsat_1_v5_gn_4_148261 Lactuca sativa HOM05D000005 ORTHO05D000012 4.1e-07 60.5 53 60.4
Lsat_1_v5_gn_4_37921 Lactuca sativa HOM05D000005 ORTHO05D000012 4.1e-07 60.5 64 53.1
Lsat_1_v5_gn_5_38020 Lactuca sativa HOM05D000005 ORTHO05D000012 5.4e-07 60.1 50 60.0
HanXRQChr09g0240031 Helianthus annuus HOM05D025036 ORTHO05D220333 7.0e-07 59.7 43 67.4
Lsat_1_v5_gn_5_39440 Lactuca sativa HOM05D000005 ORTHO05D000012 9.1e-07 59.3 65 61.5
Lsat_1_v5_gn_4_37841 Lactuca sativa HOM05D000005 ORTHO05D000012 1.6e-06 58.5 63 54.0
HanXRQChr09g0240411 Helianthus annuus HOM05D025036 ORTHO05D222539 2.0e-06 58.2 43 65.1
HanXRQChr09g0240841 Helianthus annuus HOM05D000005 ORTHO05D000012 2.0e-06 58.2 65 53.8
Lsat_1_v5_gn_9_14781 Lactuca sativa HOM05D000005 ORTHO05D000012 2.0e-06 58.2 49 63.3
Lsat_1_v5_gn_9_91940 Lactuca sativa HOM05D000005 ORTHO05D000012 2.7e-06 57.8 49 59.2
HanXRQChr09g0240111 Helianthus annuus HOM05D025036 ORTHO05D220051 4.5e-06 57.0 43 62.8
Lsat_1_v5_gn_9_91840 Lactuca sativa HOM05D000005 ORTHO05D000012 4.5e-06 57.0 87 41.4
Lsat_1_v5_gn_4_148360 Lactuca sativa HOM05D000005 ORTHO05D000012 5.9e-06 56.6 79 48.1
Lsat_1_v5_gn_5_38001 Lactuca sativa HOM05D000005 ORTHO05D000012 5.9e-06 56.6 64 56.2
Lsat_1_v5_gn_8_40680 Lactuca sativa HOM05D000005 ORTHO05D000012 5.9e-06 56.6 64 48.4
ECA240G2185 Erigeron canadensis HOM05D000005 ORTHO05D000012 7.7e-06 56.2 86 55.8


User provided reference genes

Program Settings