Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0239441 Helianthus annuus HOM05D012280 ORTHO05D012378 2.2e-171 605.9 394 100.0
HanXRQChr09g0239251 Helianthus annuus HOM05D000005 ORTHO05D000012 4.5e-84 315.8 305 72.5
HanXRQChr09g0239471 Helianthus annuus HOM05D012280 ORTHO05D012378 1.0e-72 278.1 304 67.4
HanXRQChr09g0239431 Helianthus annuus HOM05D000005 ORTHO05D000012 6.4e-54 215.7 293 56.3
HanXRQChr09g0239531 Helianthus annuus HOM05D000005 ORTHO05D000012 3.9e-51 206.5 419 56.1
HanXRQChr09g0239731 Helianthus annuus HOM05D000005 ORTHO05D000012 2.6e-47 193.7 186 58.1
HanXRQChr03g0077081 Helianthus annuus HOM05D012280 ORTHO05D012378 4.9e-46 189.5 386 45.9
ECA240G0669 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.1e-45 188.3 284 54.2
HanXRQChr09g0240561 Helianthus annuus HOM05D012280 ORTHO05D012378 3.2e-45 186.8 274 54.0
HanXRQChr09g0240261 Helianthus annuus HOM05D000005 ORTHO05D012378 1.9e-42 177.6 274 55.8
HanXRQChr09g0239271 Helianthus annuus HOM05D012280 ORTHO05D012378 6.4e-38 162.5 123 68.3
HanXRQChr09g0240341 Helianthus annuus HOM05D012280 ORTHO05D012378 3.2e-37 160.2 270 49.3
HanXRQChr17g0570631 Helianthus annuus HOM05D012280 ORTHO05D012378 3.2e-37 160.2 270 48.9
Lsat_1_v5_gn_4_150681 Lactuca sativa HOM05D000005 ORTHO05D000012 3.9e-35 153.3 278 48.6
Lsat_1_v5_gn_4_144921 Lactuca sativa HOM05D000005 ORTHO05D000012 8.7e-35 152.1 191 46.6
HanXRQChr03g0077121 Helianthus annuus HOM05D012280 ORTHO05D012378 1.1e-34 151.8 282 52.8
Lsat_1_v5_gn_4_147480 Lactuca sativa HOM05D000005 ORTHO05D000012 2.4e-32 144.1 196 44.9
HanXRQChr09g0240841 Helianthus annuus HOM05D000005 ORTHO05D000012 3.1e-32 143.7 194 44.3
ECA240G2019 Erigeron canadensis HOM05D000005 ORTHO05D000012 4.0e-32 143.3 180 46.1
Lsat_1_v5_gn_9_91461 Lactuca sativa HOM05D000005 ORTHO05D000012 4.0e-32 143.3 186 46.2
HanXRQChr09g0240011 Helianthus annuus HOM05D000005 ORTHO05D000012 5.3e-32 142.9 123 58.5
Lsat_1_v5_gn_8_82140 Lactuca sativa HOM05D000005 ORTHO05D000012 6.9e-32 142.5 280 49.6
Lsat_1_v5_gn_4_150641 Lactuca sativa HOM05D000005 ORTHO05D000012 9.0e-32 142.1 189 48.1
Lsat_1_v5_gn_9_90700 Lactuca sativa HOM05D000005 ORTHO05D000012 2.0e-31 141.0 190 44.7
Lsat_1_v5_gn_5_39440 Lactuca sativa HOM05D000005 ORTHO05D000012 5.8e-31 139.4 180 48.3
HanXRQChr09g0240101 Helianthus annuus HOM05D012280 ORTHO05D012378 7.6e-31 139.0 186 46.2
Lsat_1_v5_gn_4_111140 Lactuca sativa HOM05D000005 ORTHO05D000012 6.4e-30 136.0 190 44.2
HanXRQChr09g0239991 Helianthus annuus HOM05D000005 ORTHO05D000012 1.9e-29 134.4 185 43.2
Lsat_1_v5_gn_5_38020 Lactuca sativa HOM05D000005 ORTHO05D000012 2.4e-29 134.0 147 51.0
Lsat_1_v5_gn_5_38001 Lactuca sativa HOM05D000005 ORTHO05D000012 2.7e-28 130.6 147 51.7
Lsat_1_v5_gn_4_150441 Lactuca sativa HOM05D000005 ORTHO05D000012 4.6e-28 129.8 189 40.2
Lsat_1_v5_gn_5_39460 Lactuca sativa HOM05D000005 ORTHO05D000012 1.0e-27 128.6 317 43.5
Lsat_1_v5_gn_9_14781 Lactuca sativa HOM05D000005 ORTHO05D000012 1.0e-27 128.6 182 44.0
Lsat_1_v5_gn_4_150561 Lactuca sativa HOM05D000005 ORTHO05D000012 1.8e-27 127.9 191 41.9
Lsat_1_v5_gn_9_91400 Lactuca sativa HOM05D000005 ORTHO05D000012 1.1e-26 125.2 193 42.0
HanXRQChr13g0396521 Helianthus annuus HOM05D000005 ORTHO05D000012 1.9e-26 124.4 185 42.2
Lsat_1_v5_gn_4_148180 Lactuca sativa HOM05D012280 ORTHO05D012378 2.5e-26 124.0 282 34.4
Lsat_1_v5_gn_4_148360 Lactuca sativa HOM05D000005 ORTHO05D000012 3.3e-26 123.6 195 41.0
Lsat_1_v5_gn_4_148200 Lactuca sativa HOM05D000005 ORTHO05D000012 5.6e-26 122.9 194 41.2
Lsat_1_v5_gn_9_91880 Lactuca sativa HOM05D000005 ORTHO05D000012 5.6e-26 122.9 187 40.1
Lsat_1_v5_gn_4_148140 Lactuca sativa HOM05D000005 ORTHO05D000012 9.6e-26 122.1 154 47.4
Lsat_1_v5_gn_4_150461 Lactuca sativa HOM05D000005 ORTHO05D000012 1.3e-25 121.7 192 42.2
Lsat_1_v5_gn_4_150501 Lactuca sativa HOM05D000005 ORTHO05D012378 3.7e-25 120.2 190 41.1
Lsat_1_v5_gn_4_37821 Lactuca sativa HOM05D000005 ORTHO05D000012 3.7e-25 120.2 378 40.5
Lsat_1_v5_gn_5_39581 Lactuca sativa HOM05D000005 ORTHO05D000012 6.2e-25 119.4 147 47.6
ECA240G4241 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.8e-24 117.9 270 36.7
Lsat_1_v5_gn_4_37921 Lactuca sativa HOM05D000005 ORTHO05D000012 9.0e-24 115.5 264 31.8
Lsat_1_v5_gn_9_91840 Lactuca sativa HOM05D000005 ORTHO05D000012 2.0e-23 114.4 191 38.7
Lsat_1_v5_gn_9_91940 Lactuca sativa HOM05D000005 ORTHO05D000012 9.9e-23 112.1 186 40.9
Lsat_1_v5_gn_4_37841 Lactuca sativa HOM05D000005 ORTHO05D000012 1.3e-22 111.7 263 31.6
ECA240G2018 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.2e-21 107.1 170 39.4
HanXRQChr09g0239701 Helianthus annuus HOM05D000005 ORTHO05D000012 3.2e-21 107.1 154 66.9
Lsat_1_v5_gn_8_40680 Lactuca sativa HOM05D000005 ORTHO05D000012 2.1e-20 104.4 270 30.7
ECA240G2185 Erigeron canadensis HOM05D000005 ORTHO05D000012 7.9e-20 102.4 289 45.7
Lsat_1_v5_gn_4_145880 Lactuca sativa HOM05D000005 ORTHO05D019004 1.9e-18 97.8 197 37.6
Lsat_1_v5_gn_4_147380 Lactuca sativa HOM05D000005 ORTHO05D000012 1.3e-17 95.1 189 36.0
HanXRQChr09g0239191 Helianthus annuus HOM05D012280 ORTHO05D012378 1.1e-16 92.0 149 63.8
HanXRQChr09g0237651 Helianthus annuus HOM05D012280 ORTHO05D012378 9.0e-16 89.0 92 55.4
Lsat_1_v5_gn_4_150621 Lactuca sativa HOM05D000005 ORTHO05D000012 1.2e-15 88.6 211 34.1
HanXRQChr04g0098511 Helianthus annuus HOM05D000005 ORTHO05D000012 1.4e-13 81.6 216 31.5
Lsat_1_v5_gn_4_37901 Lactuca sativa HOM05D000005 ORTHO05D000012 1.4e-13 81.6 264 28.4
HanXRQChr04g0098741 Helianthus annuus HOM05D000005 ORTHO05D012378 7.1e-13 79.3 218 32.1
HanXRQChr09g0237661 Helianthus annuus HOM05D012280 ORTHO05D225755 2.1e-12 77.8 104 43.3
Lsat_1_v5_gn_9_92740 Lactuca sativa HOM05D000005 ORTHO05D000012 3.5e-12 77.0 110 41.8
HanXRQChr04g0098541 Helianthus annuus HOM05D000005 ORTHO05D000012 7.9e-12 75.9 223 30.9
Lsat_1_v5_gn_9_93340 Lactuca sativa HOM05D000005 ORTHO05D000012 7.9e-12 75.9 111 41.4
HanXRQChr04g0098371 Helianthus annuus HOM05D000005 ORTHO05D012378 1.0e-11 75.5 215 30.7
HanXRQChr16g0521751 Helianthus annuus HOM05D000005 ORTHO05D012378 2.3e-11 74.3 219 31.1
Lsat_1_v5_gn_2_4981 Lactuca sativa HOM05D000005 ORTHO05D000012 3.9e-11 73.6 217 30.0
HanXRQChr04g0098851 Helianthus annuus HOM05D000005 ORTHO05D012378 5.1e-11 73.2 218 30.3
HanXRQChr04g0098911 Helianthus annuus HOM05D000005 ORTHO05D000012 6.7e-11 72.8 218 30.7
HanXRQChr09g0240081 Helianthus annuus HOM05D025036 ORTHO05D221687 8.7e-11 72.4 226 53.1
Lsat_1_v5_gn_2_25361 Lactuca sativa HOM05D000005 ORTHO05D000012 8.7e-11 72.4 235 37.0
HanXRQChr04g0098661 Helianthus annuus HOM05D000005 ORTHO05D000012 1.5e-10 71.6 218 29.8
HanXRQChr04g0098761 Helianthus annuus HOM05D000005 ORTHO05D000012 1.5e-10 71.6 218 30.3
HanXRQChr10g0317291 Helianthus annuus HOM05D019679 ORTHO05D012378 7.4e-10 69.3 238 28.2
HanXRQChr09g0239551 Helianthus annuus HOM05D000005 ORTHO05D000012 9.7e-10 68.9 50 66.0
HanXRQChr10g0317141 Helianthus annuus HOM05D000005 ORTHO05D000012 9.7e-10 68.9 139 35.3
Lsat_1_v5_gn_9_92980 Lactuca sativa HOM05D000005 ORTHO05D000012 1.6e-09 68.2 108 38.9
Lsat_1_v5_gn_9_92681 Lactuca sativa HOM05D000005 ORTHO05D000012 4.1e-08 63.5 109 34.9
HanXRQChr04g0098561 Helianthus annuus HOM05D000005 ORTHO05D000012 9.0e-08 62.4 212 28.8
ECA234G2587 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.2e-07 62.0 195 30.8
Lsat_1_v5_gn_5_159861 Lactuca sativa HOM05D000005 ORTHO05D036373 1.2e-07 62.0 115 38.3
HanXRQChr17g0570661 Helianthus annuus HOM05D025036 ORTHO05D220866 1.5e-07 61.6 186 58.1
Lsat_1_v5_gn_2_32820 Lactuca sativa HOM05D000005 ORTHO05D000012 1.5e-07 61.6 268 27.6
HanXRQChr04g0098501 Helianthus annuus HOM05D000005 ORTHO05D019004 2.6e-07 60.8 197 28.9
Lsat_1_v5_gn_4_148261 Lactuca sativa HOM05D000005 ORTHO05D000012 2.6e-07 60.8 148 33.1
Lsat_1_v5_gn_2_15901 Lactuca sativa HOM05D000005 ORTHO05D000012 7.7e-07 59.3 268 26.9
Lsat_1_v5_gn_2_17301 Lactuca sativa HOM05D000005 ORTHO05D000012 1.0e-06 58.9 261 26.1
Lsat_1_v5_gn_9_92800 Lactuca sativa HOM05D000005 ORTHO05D000012 2.2e-06 57.8 108 38.9
HanXRQChr04g0098331 Helianthus annuus HOM05D019679 ORTHO05D225102 2.9e-06 57.4 60 51.7
HanXRQChr09g0244091 Helianthus annuus HOM05D019679 ORTHO05D222855 2.9e-06 57.4 60 51.7
HanXRQChr09g0244071 Helianthus annuus HOM05D000005 ORTHO05D000012 8.5e-06 55.8 145 31.0


User provided reference genes

Program Settings