Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0239171 Helianthus annuus HOM05D000005 ORTHO05D036373 3.6e-34 148.7 70 100.0
HanXRQChr09g0240571 Helianthus annuus HOM05D000005 ORTHO05D000012 2.9e-20 102.4 69 69.6
HanXRQChr09g0240261 Helianthus annuus HOM05D000005 ORTHO05D012378 1.2e-18 97.1 69 65.2
HanXRQChr09g0240011 Helianthus annuus HOM05D000005 ORTHO05D000012 1.6e-18 96.7 69 66.7
HanXRQChr09g0240171 Helianthus annuus HOM05D000005 ORTHO05D036373 2.1e-18 96.3 69 63.8
HanXRQChr09g0240841 Helianthus annuus HOM05D000005 ORTHO05D000012 8.0e-18 94.4 67 67.2
HanXRQChr13g0396521 Helianthus annuus HOM05D000005 ORTHO05D000012 2.3e-17 92.8 68 64.7
HanXRQChr09g0239431 Helianthus annuus HOM05D000005 ORTHO05D000012 3.0e-17 92.4 69 63.8
Lsat_1_v5_gn_4_150621 Lactuca sativa HOM05D000005 ORTHO05D000012 8.8e-17 90.9 69 63.8
HanXRQChr09g0239731 Helianthus annuus HOM05D000005 ORTHO05D000012 1.5e-16 90.1 69 63.8
Lsat_1_v5_gn_4_148200 Lactuca sativa HOM05D000005 ORTHO05D000012 3.3e-16 89.0 67 64.2
Lsat_1_v5_gn_5_38001 Lactuca sativa HOM05D000005 ORTHO05D000012 7.4e-16 87.8 69 58.0
Lsat_1_v5_gn_5_159861 Lactuca sativa HOM05D000005 ORTHO05D036373 1.3e-15 87.0 69 60.9
HanXRQChr09g0239211 Helianthus annuus HOM05D000005 ORTHO05D000012 1.7e-15 86.7 69 59.4
Lsat_1_v5_gn_9_14781 Lactuca sativa HOM05D000005 ORTHO05D000012 1.7e-15 86.7 67 65.7
Lsat_1_v5_gn_9_91400 Lactuca sativa HOM05D000005 ORTHO05D000012 2.2e-15 86.3 69 63.8
HanXRQChr09g0239991 Helianthus annuus HOM05D000005 ORTHO05D000012 3.7e-15 85.5 67 59.7
Lsat_1_v5_gn_4_147380 Lactuca sativa HOM05D000005 ORTHO05D000012 3.7e-15 85.5 69 60.9
Lsat_1_v5_gn_4_148421 Lactuca sativa HOM05D000005 ORTHO05D000012 3.7e-15 85.5 69 58.0
HanXRQChr09g0239251 Helianthus annuus HOM05D000005 ORTHO05D000012 4.8e-15 85.1 69 63.8
Lsat_1_v5_gn_4_37921 Lactuca sativa HOM05D000005 ORTHO05D000012 4.8e-15 85.1 69 56.5
Lsat_1_v5_gn_9_90140 Lactuca sativa HOM05D000005 ORTHO05D000012 6.3e-15 84.7 69 63.8
HanXRQChr09g0239451 Helianthus annuus HOM05D000005 ORTHO05D000012 8.2e-15 84.3 68 64.7
Lsat_1_v5_gn_9_92800 Lactuca sativa HOM05D000005 ORTHO05D000012 8.2e-15 84.3 67 62.7
HanXRQChr09g0239701 Helianthus annuus HOM05D000005 ORTHO05D000012 1.1e-14 84.0 67 62.7
HanXRQChr09g0239531 Helianthus annuus HOM05D000005 ORTHO05D000012 1.4e-14 83.6 69 60.9
Lsat_1_v5_gn_4_148360 Lactuca sativa HOM05D000005 ORTHO05D000012 1.4e-14 83.6 69 60.9
Lsat_1_v5_gn_9_92681 Lactuca sativa HOM05D000005 ORTHO05D000012 1.4e-14 83.6 67 62.7
Lsat_1_v5_gn_9_93340 Lactuca sativa HOM05D000005 ORTHO05D000012 1.4e-14 83.6 69 60.9
Lsat_1_v5_gn_4_145880 Lactuca sativa HOM05D000005 ORTHO05D019004 2.4e-14 82.8 69 60.9
Lsat_1_v5_gn_9_91461 Lactuca sativa HOM05D000005 ORTHO05D000012 3.1e-14 82.4 69 55.1
Lsat_1_v5_gn_4_148140 Lactuca sativa HOM05D000005 ORTHO05D000012 5.3e-14 81.6 69 59.4
ECA240G0669 Erigeron canadensis HOM05D000005 ORTHO05D000012 9.1e-14 80.9 69 52.2
Lsat_1_v5_gn_4_150561 Lactuca sativa HOM05D000005 ORTHO05D000012 1.2e-13 80.5 69 56.5
Lsat_1_v5_gn_5_38020 Lactuca sativa HOM05D000005 ORTHO05D000012 1.2e-13 80.5 69 58.0
Lsat_1_v5_gn_9_91521 Lactuca sativa HOM05D000005 ORTHO05D000012 1.2e-13 80.5 61 62.3
Lsat_1_v5_gn_4_37901 Lactuca sativa HOM05D000005 ORTHO05D000012 1.6e-13 80.1 69 52.2
Lsat_1_v5_gn_5_39440 Lactuca sativa HOM05D000005 ORTHO05D000012 1.6e-13 80.1 63 61.9
Lsat_1_v5_gn_2_25361 Lactuca sativa HOM05D000005 ORTHO05D000012 2.0e-13 79.7 66 60.6
Lsat_1_v5_gn_9_91481 Lactuca sativa HOM05D000005 ORTHO05D000012 3.5e-13 79.0 61 62.3
Lsat_1_v5_gn_4_148261 Lactuca sativa HOM05D000005 ORTHO05D000012 4.5e-13 78.6 67 59.7
Lsat_1_v5_gn_5_39581 Lactuca sativa HOM05D000005 ORTHO05D000012 4.5e-13 78.6 69 56.5
Lsat_1_v5_gn_9_91940 Lactuca sativa HOM05D000005 ORTHO05D000012 4.5e-13 78.6 67 59.7
Lsat_1_v5_gn_4_37821 Lactuca sativa HOM05D000005 ORTHO05D000012 7.7e-13 77.8 64 57.8
Lsat_1_v5_gn_4_111140 Lactuca sativa HOM05D000005 ORTHO05D000012 1.3e-12 77.0 67 59.7
Lsat_1_v5_gn_8_82140 Lactuca sativa HOM05D000005 ORTHO05D000012 1.3e-12 77.0 69 56.5
Lsat_1_v5_gn_4_144921 Lactuca sativa HOM05D000005 ORTHO05D000012 1.7e-12 76.6 69 56.5
Lsat_1_v5_gn_5_39460 Lactuca sativa HOM05D000005 ORTHO05D000012 1.7e-12 76.6 69 55.1
Lsat_1_v5_gn_9_91441 Lactuca sativa HOM05D000005 ORTHO05D000012 1.7e-12 76.6 61 59.0
Lsat_1_v5_gn_9_92980 Lactuca sativa HOM05D000005 ORTHO05D000012 2.2e-12 76.3 72 58.3
HanXRQChr04g0098501 Helianthus annuus HOM05D000005 ORTHO05D019004 2.9e-12 75.9 69 58.0
Lsat_1_v5_gn_9_92740 Lactuca sativa HOM05D000005 ORTHO05D000012 8.5e-12 74.3 75 56.0
ECA247G1159 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.1e-11 73.9 67 55.2
ECA247G2860 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.1e-11 73.9 68 52.9
ECA240G2185 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.5e-11 73.6 69 52.2
Lsat_1_v5_gn_9_91840 Lactuca sativa HOM05D000005 ORTHO05D000012 1.9e-11 73.2 63 58.7
Lsat_1_v5_gn_9_92880 Lactuca sativa HOM05D000005 ORTHO05D000012 1.9e-11 73.2 69 56.5
ECA234G2587 Erigeron canadensis HOM05D000005 ORTHO05D000012 2.5e-11 72.8 67 55.2
ECA240G3423 Erigeron canadensis HOM05D000005 ORTHO05D000012 2.5e-11 72.8 69 52.2
Lsat_1_v5_gn_4_150441 Lactuca sativa HOM05D000005 ORTHO05D000012 3.2e-11 72.4 69 53.6
Lsat_1_v5_gn_8_40680 Lactuca sativa HOM05D000005 ORTHO05D000012 4.2e-11 72.0 71 52.1
HanXRQChr04g0098511 Helianthus annuus HOM05D000005 ORTHO05D000012 5.5e-11 71.6 67 53.7
HanXRQChr09g0239551 Helianthus annuus HOM05D000005 ORTHO05D000012 5.5e-11 71.6 65 53.8
Lsat_1_v5_gn_9_91361 Lactuca sativa HOM05D000005 ORTHO05D000012 5.5e-11 71.6 60 60.0
HanXRQChr10g0317141 Helianthus annuus HOM05D000005 ORTHO05D000012 7.2e-11 71.2 69 55.1
ECA240G4241 Erigeron canadensis HOM05D000005 ORTHO05D000012 9.4e-11 70.9 66 54.5
HanXRQChr04g0098741 Helianthus annuus HOM05D000005 ORTHO05D012378 9.4e-11 70.9 69 53.6
Lsat_1_v5_gn_4_147480 Lactuca sativa HOM05D000005 ORTHO05D000012 9.4e-11 70.9 67 52.2
Lsat_1_v5_gn_9_91880 Lactuca sativa HOM05D000005 ORTHO05D000012 9.4e-11 70.9 67 55.2
ECA240G2019 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.2e-10 70.5 68 50.0
ECA240G2018 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.6e-10 70.1 69 50.7
HanXRQChr09g0239471 Helianthus annuus HOM05D012280 ORTHO05D012378 2.1e-10 69.7 91 45.1
HanXRQChr04g0098541 Helianthus annuus HOM05D000005 ORTHO05D000012 2.7e-10 69.3 69 55.1
ECA247G0218 Erigeron canadensis HOM05D000005 ORTHO05D000012 3.6e-10 68.9 57 54.4
Lsat_1_v5_gn_2_15901 Lactuca sativa HOM05D000005 ORTHO05D000012 3.6e-10 68.9 65 53.8
Lsat_1_v5_gn_9_90700 Lactuca sativa HOM05D000005 ORTHO05D000012 3.6e-10 68.9 67 52.2
Lsat_1_v5_gn_9_91281 Lactuca sativa HOM05D000005 ORTHO05D000012 3.6e-10 68.9 61 55.7
HanXRQChr04g0098661 Helianthus annuus HOM05D000005 ORTHO05D000012 6.1e-10 68.2 69 53.6
HanXRQChr04g0098911 Helianthus annuus HOM05D000005 ORTHO05D000012 6.1e-10 68.2 69 53.6
HanXRQChr15g0465971 Helianthus annuus HOM05D000005 ORTHO05D000012 6.1e-10 68.2 69 55.1
Lsat_1_v5_gn_2_4981 Lactuca sativa HOM05D000005 ORTHO05D000012 8.0e-10 67.8 67 50.7
HanXRQChr04g0098761 Helianthus annuus HOM05D000005 ORTHO05D000012 1.4e-09 67.0 69 52.2
ECA240G2479 Erigeron canadensis HOM05D000005 ORTHO05D000012 1.8e-09 66.6 69 46.4
Lsat_1_v5_gn_2_15941 Lactuca sativa HOM05D000005 ORTHO05D000012 1.8e-09 66.6 67 52.2
HanXRQChr09g0244071 Helianthus annuus HOM05D000005 ORTHO05D000012 2.3e-09 66.2 69 53.6
Lsat_1_v5_gn_2_32820 Lactuca sativa HOM05D000005 ORTHO05D000012 4.0e-09 65.5 65 46.2
Lsat_1_v5_gn_4_37680 Lactuca sativa HOM05D000005 ORTHO05D000012 4.0e-09 65.5 69 49.3
ECA232G5022 Erigeron canadensis HOM05D000005 ORTHO05D000012 5.2e-09 65.1 68 48.5
Lsat_1_v5_gn_4_150681 Lactuca sativa HOM05D000005 ORTHO05D000012 5.2e-09 65.1 69 52.2
Lsat_1_v5_gn_9_91561 Lactuca sativa HOM05D000005 ORTHO05D000012 6.7e-09 64.7 62 56.5
Lsat_1_v5_gn_9_92720 Lactuca sativa HOM05D000005 ORTHO05D000012 6.7e-09 64.7 65 55.4
HanXRQChr04g0098851 Helianthus annuus HOM05D000005 ORTHO05D012378 7.5e-08 61.2 61 54.1
Lsat_1_v5_gn_4_37841 Lactuca sativa HOM05D000005 ORTHO05D000012 7.5e-08 61.2 46 56.5
Lsat_1_v5_gn_2_15981 Lactuca sativa HOM05D000005 ORTHO05D000012 1.7e-07 60.1 64 46.9
Lsat_1_v5_gn_5_27220 Lactuca sativa HOM05D000005 ORTHO05D000012 1.7e-07 60.1 65 46.2
HanXRQChr16g0522521 Helianthus annuus HOM05D000005 ORTHO05D000012 2.2e-07 59.7 70 50.0
HanXRQChr16g0521501 Helianthus annuus HOM05D000005 ORTHO05D000012 2.8e-07 59.3 70 51.4
HanXRQChr03g0077081 Helianthus annuus HOM05D012280 ORTHO05D012378 1.1e-06 57.4 45 57.8
COL.COLO4_17383 Corchorus olitorius HOM05D000005 ORTHO05D000012 4.1e-06 55.5 64 48.4
HanXRQChr04g0098561 Helianthus annuus HOM05D000005 ORTHO05D000012 5.3e-06 55.1 66 50.0
QL93p1902_0177 Quercus lobata HOM05D000005 ORTHO05D002559 5.3e-06 55.1 71 46.5
ECA236G0771 Erigeron canadensis HOM05D000005 ORTHO05D000012 7.0e-06 54.7 68 44.1


User provided reference genes

Program Settings