Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0238771 Helianthus annuus HOM05D008481 ORTHO05D010853 2.3e-159 565.5 278 100.0
HanXRQChr13g0424061 Helianthus annuus HOM05D000009 ORTHO05D010853 2.1e-144 515.8 268 92.2
HanXRQChr04g0099031 Helianthus annuus HOM05D008481 ORTHO05D010853 1.2e-126 456.8 260 83.5
HanXRQChr13g0404711 Helianthus annuus HOM05D008481 ORTHO05D010853 9.8e-126 453.8 268 80.2
HanXRQChr06g0176691 Helianthus annuus HOM05D008481 ORTHO05D010853 4.9e-125 451.4 268 80.6
HanXRQChr09g0247291 Helianthus annuus HOM05D000103 ORTHO05D000049 2.4e-124 449.1 270 77.8
HanXRQChr03g0080651 Helianthus annuus HOM05D008481 ORTHO05D010853 1.2e-118 430.3 268 73.9
HanXRQChr08g0221501 Helianthus annuus HOM05D008481 ORTHO05D010853 2.6e-118 429.1 268 73.5
HanXRQChr13g0424211 Helianthus annuus HOM05D008481 ORTHO05D010853 7.5e-118 427.6 268 73.5
HanXRQChr06g0175741 Helianthus annuus HOM05D008481 ORTHO05D010853 6.0e-107 391.3 268 66.4
HanXRQChr13g0403351 Helianthus annuus HOM05D008481 ORTHO05D010853 3.8e-101 372.1 269 62.8
HanXRQChr17g0537341 Helianthus annuus HOM05D008481 ORTHO05D010853 3.2e-100 369.0 269 60.6
HanXRQChr11g0323671 Helianthus annuus HOM05D008481 ORTHO05D010853 4.2e-100 368.6 269 62.8
HanXRQChr04g0119441 Helianthus annuus HOM05D008481 ORTHO05D010853 8.7e-98 360.9 269 60.2
HanXRQChr14g0447151 Helianthus annuus HOM05D000026 ORTHO05D000127 8.7e-98 360.9 268 60.1
HanXRQChr05g0132501 Helianthus annuus HOM05D008481 ORTHO05D010853 3.3e-97 359.0 268 59.7
HanXRQChr04g0119421 Helianthus annuus HOM05D008481 ORTHO05D010853 4.3e-97 358.6 268 59.7
HanXRQChr11g0333451 Helianthus annuus HOM05D008481 ORTHO05D010853 7.3e-97 357.8 268 59.3
HanXRQChr13g0425251 Helianthus annuus HOM05D008481 ORTHO05D010853 7.3e-97 357.8 269 59.1
HanXRQChr04g0098781 Helianthus annuus HOM05D008481 ORTHO05D010853 2.1e-96 356.3 268 59.3
HanXRQChr10g0279551 Helianthus annuus HOM05D008481 ORTHO05D010853 8.1e-96 354.4 268 59.0
HanXRQChr01g0028171 Helianthus annuus HOM05D008481 ORTHO05D010853 1.1e-95 354.0 269 60.2
HanXRQChr14g0444101 Helianthus annuus HOM05D008481 ORTHO05D010853 9.9e-94 347.4 269 58.7
HanXRQChr06g0165321 Helianthus annuus HOM05D008481 ORTHO05D010853 3.8e-93 345.5 269 58.7
HanXRQChr01g0014081 Helianthus annuus HOM05D008481 ORTHO05D010853 4.2e-92 342.0 303 54.8
HanXRQChr10g0292931 Helianthus annuus HOM05D008481 ORTHO05D010853 1.0e-90 337.4 251 62.2
HanXRQChr13g0406131 Helianthus annuus HOM05D008481 ORTHO05D010853 3.0e-82 309.3 265 50.2
HanXRQChr13g0421041 Helianthus annuus HOM05D008481 ORTHO05D010853 3.0e-82 309.3 267 52.8
HanXRQChr05g0143231 Helianthus annuus HOM05D008481 ORTHO05D010853 5.3e-79 298.5 267 48.3
HanXRQChr15g0467161 Helianthus annuus HOM05D008481 ORTHO05D010853 5.3e-79 298.5 267 50.2
HanXRQChr02g0036691 Helianthus annuus HOM05D008481 ORTHO05D010853 5.8e-78 295.0 266 48.1
HanXRQChr03g0068141 Helianthus annuus HOM05D008481 ORTHO05D010853 2.9e-77 292.7 267 50.6
HanXRQChr10g0304581 Helianthus annuus HOM05D008481 ORTHO05D010853 1.8e-74 283.5 267 49.1
HanXRQChr04g0123551 Helianthus annuus HOM05D008481 ORTHO05D010853 2.3e-74 283.1 251 52.2
HanXRQChr05g0131281 Helianthus annuus HOM05D008481 ORTHO05D010853 5.3e-71 271.9 251 47.0
HanXRQChr08g0216321 Helianthus annuus HOM05D000374 ORTHO05D000238 1.2e-70 270.8 268 49.6
HanXRQChr17g0545601 Helianthus annuus HOM05D008481 ORTHO05D010853 1.2e-70 270.8 254 47.6
HanXRQChr14g0443501 Helianthus annuus HOM05D001485 ORTHO05D001384 3.8e-69 265.8 266 45.9
HanXRQChr12g0372911 Helianthus annuus HOM05D008481 ORTHO05D010853 3.9e-66 255.8 238 47.5
HanXRQChr03g0068301 Helianthus annuus HOM05D008481 ORTHO05D010853 5.1e-66 255.4 269 43.5
HanXRQChr02g0039311 Helianthus annuus HOM05D008481 ORTHO05D010853 1.4e-63 247.3 211 50.7
HanXRQChr11g0345591 Helianthus annuus HOM05D008481 ORTHO05D010853 4.2e-60 235.7 267 44.6
HanXRQChr06g0178781 Helianthus annuus HOM05D008481 ORTHO05D010853 1.2e-41 174.5 142 56.3
HanXRQChr06g0175731 Helianthus annuus HOM05D008481 ORTHO05D010853 2.7e-35 153.3 151 47.0
HanXRQChr13g0423431 Helianthus annuus HOM05D008481 ORTHO05D010853 1.5e-33 147.5 109 59.6
HanXRQChr17g0555551 Helianthus annuus HOM05D000430 ORTHO05D010853 3.4e-25 119.8 93 54.8
HanXRQChr06g0175721 Helianthus annuus HOM05D000259 ORTHO05D000155 7.5e-25 118.6 320 27.2
HanXRQChr10g0293981 Helianthus annuus HOM05D000352 ORTHO05D010853 3.5e-22 109.8 100 48.0
ECA247G0145 Erigeron canadensis HOM05D008481 ORTHO05D020572 4.5e-22 109.4 273 30.0
HanXRQChr01g0014131 Helianthus annuus HOM05D002629 ORTHO05D015691 5.9e-22 109.0 316 26.9
HanXRQChr08g0223151 Helianthus annuus HOM05D002629 ORTHO05D015691 5.9e-22 109.0 316 26.9
HanXRQChr16g0527861 Helianthus annuus HOM05D002629 ORTHO05D015691 5.9e-22 109.0 316 26.9
HanXRQChr13g0421571 Helianthus annuus HOM05D002629 ORTHO05D015691 7.8e-22 108.6 316 26.9
HanXRQChr13g0421581 Helianthus annuus HOM05D002629 ORTHO05D015691 7.8e-22 108.6 316 26.9
HanXRQChr04g0116991 Helianthus annuus HOM05D000103 ORTHO05D000049 1.3e-21 107.8 318 26.1
HanXRQChr03g0093141 Helianthus annuus HOM05D002629 ORTHO05D003221 2.9e-21 106.7 316 26.3
HanXRQChr01g0009301 Helianthus annuus HOM05D002629 ORTHO05D015691 5.0e-21 105.9 317 26.5
HanXRQChr11g0332071 Helianthus annuus HOM05D002629 ORTHO05D015691 8.6e-21 105.1 318 23.9
HanXRQChr07g0196831 Helianthus annuus HOM05D002629 ORTHO05D015691 9.5e-20 101.7 317 24.9
HanXRQChr01g0016981 Helianthus annuus HOM05D002629 ORTHO05D015691 1.4e-18 97.8 183 31.7
HanXRQChr02g0054601 Helianthus annuus HOM05D002629 ORTHO05D015691 5.2e-18 95.9 318 24.2
ECA247G2483 Erigeron canadensis HOM05D008481 ORTHO05D020572 2.0e-17 94.0 276 26.1
ECA240G4703 Erigeron canadensis HOM05D008481 ORTHO05D020572 7.5e-17 92.0 276 25.0
HanXRQChr13g0387641 Helianthus annuus HOM05D002629 ORTHO05D015691 5.6e-12 75.9 287 24.7
ECA238G1460 Erigeron canadensis HOM05D008481 ORTHO05D020572 1.2e-11 74.7 119 34.5
HanXRQChr01g0010101 Helianthus annuus HOM05D002629 ORTHO05D015691 4.7e-11 72.8 256 25.8
ECA236G1121 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-10 70.1 201 28.9
Hma1.2p1_0171F.1_g075850 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.5e-09 67.8 101 31.7
HanXRQChr02g0038571 Helianthus annuus HOM05D000002 ORTHO05D000001 2.0e-09 67.4 93 36.6
ECA246G5016 Erigeron canadensis HOM05D008481 ORTHO05D020572 3.7e-08 63.2 202 25.7
ECA248G2246 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.7e-08 63.2 106 29.2
HanXRQChr14g0429821 Helianthus annuus HOM05D000002 ORTHO05D000001 4.9e-08 62.8 124 29.0
Sopen04g023400 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-08 62.8 111 29.7
ECA232G4777 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.4e-08 62.4 122 27.0
FvH4_1g02351 Fragaria vesca HOM05D000002 ORTHO05D000001 8.3e-08 62.0 128 28.9
Sopen09g022940 Solanum pennellii HOM05D000002 ORTHO05D000001 8.3e-08 62.0 95 30.5
ECA232G3865 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-07 61.6 95 28.4
HanXRQChr15g0467201 Helianthus annuus HOM05D000002 ORTHO05D000001 1.1e-07 61.6 105 27.6
Hma1.2p1_2049F.1_g312480 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.4e-07 61.2 94 31.9
HanXRQChr02g0049901 Helianthus annuus HOM05D000002 ORTHO05D000001 2.4e-07 60.5 95 29.5
Nn1g02421 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.4e-07 60.5 106 28.3
RcHm_v2.0_Chr5g0080061 Rosa chinensis HOM05D000002 ORTHO05D000001 3.2e-07 60.1 95 30.5
Sopen09g029100 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-07 60.1 109 31.2
Sopen12g026370 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-07 60.1 109 31.2
CSS0017873 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.1e-07 59.7 103 30.1
Sopen05g021360 Solanum pennellii HOM05D000002 ORTHO05D000001 4.1e-07 59.7 105 28.6
ECA248G1913 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.4e-07 59.3 127 26.8
HanXRQChr12g0366491 Helianthus annuus HOM05D000002 ORTHO05D000001 7.1e-07 58.9 105 26.7
RcHm_v2.0_Chr7g0237911 Rosa chinensis HOM05D000002 ORTHO05D000001 7.1e-07 58.9 105 27.6
Nn1g02756 Nelumbo nucifera HOM05D000002 ORTHO05D000001 9.2e-07 58.5 95 30.5
RcHm_v2.0_Chr1g0330731 Rosa chinensis HOM05D000002 ORTHO05D000001 9.2e-07 58.5 105 27.6
CSS0005727 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-06 58.2 98 29.6
CSS0015467 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-06 58.2 95 29.5
FvH4_3g03542 Fragaria vesca HOM05D000002 ORTHO05D000001 1.2e-06 58.2 94 28.7
CSS0045643 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-06 57.8 94 30.9
ECA232G1928 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-06 57.8 95 30.5
HanXRQChr02g0050541 Helianthus annuus HOM05D000002 ORTHO05D000001 1.6e-06 57.8 93 33.3
RcHm_v2.0_Chr5g0056061 Rosa chinensis HOM05D000002 ORTHO05D000001 1.6e-06 57.8 106 29.2
CSS0018619 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-06 57.4 95 28.4
CSS0020078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-06 57.4 95 28.4
CSS0036723 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-06 57.4 95 28.4
CSS0038200 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.1e-06 57.4 94 29.8
ECA247G1667 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.1e-06 57.4 93 28.0
CSS0009222 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-06 57.0 93 29.0
CiPaw.05G254000 Carya illinoinensis HOM05D000002 ORTHO05D000001 2.7e-06 57.0 93 29.0
ECA234G2551 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-06 57.0 93 28.0
ECA247G3746 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-06 57.0 95 28.4
FvH4_7g13272 Fragaria vesca HOM05D000002 ORTHO05D000001 2.7e-06 57.0 98 27.6
Sopen07g014860 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-06 57.0 154 26.6
MD10G1162100 Malus domestica HOM05D000002 ORTHO05D000001 3.5e-06 56.6 93 30.1
CSS0028802 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.6e-06 56.2 95 27.4
ECA240G2823 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.6e-06 56.2 95 27.4
ECA246G4004 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.6e-06 56.2 104 26.9
MD01G1101100 Malus domestica HOM05D000002 ORTHO05D000001 4.6e-06 56.2 92 27.2
ECA233G6135 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.0e-06 55.8 86 26.7
FvH4_6g43842 Fragaria vesca HOM05D000002 ORTHO05D000001 6.0e-06 55.8 94 27.7
FvH4_7g32173 Fragaria vesca HOM05D000002 ORTHO05D000001 6.0e-06 55.8 94 28.7
Sopen01g009450 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-06 55.8 153 25.5
Sopen05g007000 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-06 55.8 153 25.5
Sopen05g015450 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-06 55.8 153 25.5
Sopen10g024570 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-06 55.8 153 25.5
Sopen12g027810 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-06 55.8 153 25.5
CSS0016955 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.8e-06 55.5 111 27.9
CSS0037187 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.8e-06 55.5 111 27.9
FvH4_3g12332 Fragaria vesca HOM05D000002 ORTHO05D000001 7.8e-06 55.5 106 26.4
FvH4_4g30902 Fragaria vesca HOM05D000002 ORTHO05D000001 7.8e-06 55.5 106 26.4
HanXRQChr09g0272931 Helianthus annuus HOM05D000002 ORTHO05D000001 7.8e-06 55.5 95 28.4
Sopen05g024300 Solanum pennellii HOM05D000002 ORTHO05D000001 7.8e-06 55.5 153 25.5


User provided reference genes

Program Settings