Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 6.3e-111 404.1 196 100.0
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 1.1e-91 340.1 204 82.8
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 2.7e-77 292.4 208 68.3
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 7.3e-75 284.3 194 68.6
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 1.6e-74 283.1 194 65.5
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 6.2e-74 281.2 204 65.7
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 3.1e-73 278.9 196 68.9
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 4.0e-73 278.5 208 64.4
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 5.2e-73 278.1 197 66.5
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 8.9e-73 277.3 200 64.0
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 1.7e-71 273.1 196 61.7
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 1.7e-71 273.1 194 63.9
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 8.3e-71 270.8 196 63.3
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 1.1e-70 270.4 199 64.8
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 1.4e-70 270.0 201 65.7
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 4.1e-70 268.5 197 65.0
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 7.0e-70 267.7 194 64.4
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 7.0e-70 267.7 196 65.3
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.1e-69 266.2 194 63.9
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 2.1e-69 266.2 194 62.9
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 3.5e-69 265.4 194 63.9
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 3.5e-69 265.4 194 63.9
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 6.0e-69 264.6 194 62.9
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 6.0e-69 264.6 194 62.9
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 6.0e-69 264.6 196 63.3
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 1.7e-68 263.1 195 65.6
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 2.3e-68 262.7 211 61.6
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.3e-68 262.7 179 67.6
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 3.0e-68 262.3 194 66.0
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 1.9e-67 259.6 201 62.7
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 3.3e-67 258.8 199 62.3
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 3.3e-67 258.8 199 62.8
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 7.3e-67 257.7 202 62.9
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 9.5e-67 257.3 194 61.9
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 1.2e-66 256.9 199 62.8
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 1.6e-66 256.5 197 61.4
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 1.6e-66 256.5 195 62.1
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 2.8e-66 255.8 196 63.8
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 8.1e-66 254.2 198 61.1
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 2.3e-65 252.7 195 63.1
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 2.3e-65 252.7 199 61.3
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 3.1e-65 252.3 194 59.8
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 3.1e-65 252.3 234 51.7
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 3.1e-65 252.3 198 61.1
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 4.0e-65 251.9 196 61.7
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 5.2e-65 251.5 203 58.1
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 5.2e-65 251.5 196 61.7
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 6.8e-65 251.1 198 60.6
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 6.8e-65 251.1 199 60.8
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 8.9e-65 250.8 199 60.8
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 1.5e-64 250.0 177 66.1
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 2.0e-64 249.6 201 59.2
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 2.0e-64 249.6 207 57.5
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 3.4e-64 248.8 186 62.4
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 4.4e-64 248.4 195 62.1
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 5.8e-64 248.1 198 58.6
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 7.5e-64 247.7 195 61.5
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 1.3e-63 246.9 194 62.4
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 1.7e-63 246.5 200 59.5
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 2.9e-63 245.7 194 58.8
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 3.7e-63 245.4 198 60.1
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 6.4e-63 244.6 148 80.4
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 8.3e-63 244.2 217 54.4
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 1.1e-62 243.8 195 61.5
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 2.4e-62 242.7 201 58.7
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 2.4e-62 242.7 201 58.7
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 5.4e-62 241.5 191 60.2
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 7.1e-62 241.1 181 62.4
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 2.7e-61 239.2 195 61.5
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 6.0e-61 238.0 196 58.2
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 6.0e-61 238.0 203 57.1
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 6.0e-61 238.0 195 57.9
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 1.7e-60 236.5 202 56.9
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 3.9e-60 235.3 196 57.7
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 5.1e-60 235.0 197 59.9
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 6.6e-60 234.6 197 56.3
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 1.5e-59 233.4 195 59.0
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 9.5e-59 230.7 198 54.5
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 1.6e-58 229.9 186 58.6
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 6.2e-58 228.0 195 58.5
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 8.9e-57 224.2 186 58.1
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 1.5e-56 223.4 211 52.6
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 2.9e-55 219.2 179 58.1
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 1.1e-51 207.2 186 53.8
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 3.4e-48 195.7 203 49.8
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 4.4e-48 195.3 138 61.6
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 1.3e-47 193.7 164 54.9
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 7.1e-46 188.0 208 51.0
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 3.0e-44 182.6 142 57.7
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 2.5e-43 179.5 169 50.3
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 6.2e-42 174.9 162 54.9
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 6.2e-42 174.9 193 49.7
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 2.1e-37 159.8 148 56.1
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 4.6e-37 158.7 163 49.1
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 6.0e-37 158.3 108 74.1
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 5.6e-35 151.8 119 58.8
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 1.6e-29 133.7 151 45.0
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.7e-29 132.9 129 51.2
HanXRQChr03g0061031 Helianthus annuus HOM05D006529 ORTHO05D008380 2.3e-28 129.8 87 78.2
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 8.2e-26 121.3 162 35.8
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 9.0e-25 117.9 108 52.8
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 2.7e-21 106.3 67 64.2
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 1.0e-20 104.4 148 41.9
CBR_g10883 Chara braunii HOM05D006529 ORTHO05D008380 8.7e-20 101.3 191 33.0
Sabra06G0122000 Salix brachista HOM05D006529 ORTHO05D008380 8.7e-20 101.3 99 52.5
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.5e-19 100.5 71 67.6
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 9.7e-19 97.8 86 55.8
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 2.4e-17 93.2 56 75.0
Cre11.g467752 Chlamydomonas reinhardtii HOM05D006529 ORTHO05D008380 1.2e-13 80.9 201 32.3
SHI02791 Sapria himalayana HOM05D006529 ORTHO05D008380 3.0e-12 76.3 49 67.3
RcHm_v2.0_Chr7g0226351 Rosa chinensis HOM05D006529 ORTHO05D008380 1.4e-09 67.4 54 63.0
Sopen08g011810 Solanum pennellii HOM05D006529 ORTHO05D008380 2.4e-09 66.6 72 47.2
Lalb_Chr09g0331711 Lupinus albus HOM05D006529 ORTHO05D008380 9.1e-09 64.7 45 64.4
Solyc08g041690.1 Solanum lycopersicum HOM05D006529 ORTHO05D008380 2.6e-08 63.2 38 71.1
PGSC0003DMG400015618 Solanum tuberosum HOM05D006529 ORTHO05D008380 3.4e-08 62.8 82 46.3
FAN02G1845 Fragaria x ananassa HOM05D000599 ORTHO05D000554 1.4e-06 57.4 90 38.9


User provided reference genes

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