Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0237881 Helianthus annuus HOM05D008056 ORTHO05D009804 3.7e-38 161.0 78 100.0
ECA232G3962 Erigeron canadensis HOM05D008056 ORTHO05D009804 1.7e-27 125.6 79 79.7
Lsat_1_v5_gn_9_49881 Lactuca sativa HOM05D008056 ORTHO05D009804 1.4e-24 115.9 81 75.3
HanXRQChr15g0485651 Helianthus annuus HOM05D008056 ORTHO05D009804 1.5e-18 95.9 81 64.2
Haze_00233 Corylus avellana HOM05D008056 ORTHO05D009804 6.6e-11 70.5 82 48.8
Actinidia34234 Actinidia chinensis HOM05D008056 ORTHO05D009804 3.3e-10 68.2 82 46.3
TWI39G0847 Tripterygium wilfordii HOM05D008056 ORTHO05D009804 1.2e-09 66.2 80 46.2
Actinidia08668 Actinidia chinensis HOM05D008056 ORTHO05D009804 1.6e-09 65.9 82 43.9
Nitab4.5_0000548g0010 Nicotiana tabacum HOM05D008056 ORTHO05D009804 2.1e-09 65.5 70 51.4
GSVIVG01038573001 Vitis vinifera HOM05D008056 ORTHO05D009804 4.7e-09 64.3 74 48.6
Peaxi162Scf00740g00228 Petunia axillaris HOM05D008056 ORTHO05D009804 8.0e-09 63.5 68 54.4
Dinv35348 Davidia involucrata HOM05D008056 ORTHO05D009804 2.3e-08 62.0 58 53.4
CiPaw.05G198700 Carya illinoinensis HOM05D008056 ORTHO05D009804 3.1e-08 61.6 87 42.5
CiPaw.06G044900 Carya illinoinensis HOM05D008056 ORTHO05D009804 5.2e-08 60.8 82 45.1
Cc02_g01320 Coffea canephora HOM05D008056 ORTHO05D009804 5.2e-08 60.8 83 44.6
Oeu060999.1 Olea europaea HOM05D008056 ORTHO05D009804 1.2e-07 59.7 81 43.2
PGSC0003DMG400018526 Solanum tuberosum HOM05D008056 ORTHO05D009804 1.2e-07 59.7 70 47.1
CAN.G312.7 Capsicum annuum HOM05D008056 ORTHO05D009804 2.6e-07 58.5 61 55.7
MD01G1223300 Malus domestica HOM05D015219 ORTHO05D009804 3.4e-07 58.2 74 51.4
Nitab4.5_0005491g0040 Nicotiana tabacum HOM05D008056 ORTHO05D009804 3.4e-07 58.2 84 45.2
PGSC0003DMG400019598 Solanum tuberosum HOM05D008056 ORTHO05D009804 3.4e-07 58.2 60 51.7
Cpa.g.sc3.104 Carica papaya HOM05D008056 ORTHO05D009804 4.4e-07 57.8 78 47.4
vmacro06398 Vaccinium macrocarpon HOM05D008056 ORTHO05D009804 4.4e-07 57.8 81 44.4
Lsat_1_v5_gn_2_136321 Lactuca sativa HOM05D008056 ORTHO05D009804 5.8e-07 57.4 79 48.1
Rhsim03G0210900 Rhododendron simsii HOM05D008056 ORTHO05D009804 5.8e-07 57.4 80 42.5
Solyc03g082945.1 Solanum lycopersicum HOM05D008056 ORTHO05D009804 7.5e-07 57.0 70 44.3
Sopen03g022760 Solanum pennellii HOM05D008056 ORTHO05D009804 7.5e-07 57.0 70 44.3
Hma1.2p1_0591F.1_g185220 Hydrangea macrophylla HOM05D008056 ORTHO05D009804 9.8e-07 56.6 82 41.5
RcHm_v2.0_Chr1g0381651 Rosa chinensis HOM05D015219 ORTHO05D009804 1.3e-06 56.2 85 43.5
Potri.012G017400 Populus trichocarpa HOM05D008056 ORTHO05D009804 1.7e-06 55.8 78 51.3
Solyc06g052020.2 Solanum lycopersicum HOM05D008056 ORTHO05D009804 2.9e-06 55.1 61 52.5
Glyma.04G233800 Glycine max HOM05D008056 ORTHO05D009804 3.7e-06 54.7 75 37.3
Prupe.2G313800 Prunus persica HOM05D015219 ORTHO05D009804 4.9e-06 54.3 76 43.4
Sopen06g018070 Solanum pennellii HOM05D008056 ORTHO05D009804 8.3e-06 53.5 64 51.6


User provided reference genes

Program Settings