Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0237461 Helianthus annuus HOM05D005166 ORTHO05D006120 6.4e-67 257.7 171 100.0
HanXRQChr08g0237471 Helianthus annuus HOM05D005166 ORTHO05D006120 1.7e-35 153.3 231 45.0
HanXRQChr08g0237371 Helianthus annuus HOM05D005166 ORTHO05D006120 1.0e-32 144.1 244 42.6
HanXRQChr01g0001871 Helianthus annuus HOM05D005166 ORTHO05D006120 2.8e-30 136.0 231 41.6
ECA247G0723 Erigeron canadensis HOM05D005166 ORTHO05D006120 1.6e-17 93.6 222 33.8
Lsat_1_v5_gn_9_24820 Lactuca sativa HOM05D005166 ORTHO05D006120 3.9e-16 89.0 231 34.6
Lalb_Chr01g0003471 Lupinus albus HOM05D005166 ORTHO05D006120 5.8e-12 75.1 50 74.0
Lalb_Chr19g0137981 Lupinus albus HOM05D005166 ORTHO05D006120 1.0e-11 74.3 63 63.5
QL01p029224 Quercus lobata HOM05D005166 ORTHO05D006120 1.0e-11 74.3 50 74.0
RcHm_v2.0_Chr5g0066361 Rosa chinensis HOM05D005166 ORTHO05D006120 1.0e-11 74.3 50 74.0
Medtr4g064740 Medicago truncatula HOM05D005166 ORTHO05D006120 2.2e-11 73.2 50 74.0
Prupe.6G070300 Prunus persica HOM05D005166 ORTHO05D006120 2.9e-11 72.8 50 72.0
SGA_v2.0_scaffold111G31544 Striga asiatica HOM05D005166 ORTHO05D006120 2.9e-11 72.8 50 72.0
FvH4_3g36942 Fragaria vesca HOM05D005166 ORTHO05D006120 3.8e-11 72.4 50 72.0
FAN11G2353 Fragaria x ananassa HOM05D005166 ORTHO05D006120 3.8e-11 72.4 50 72.0
FAN16G3680 Fragaria x ananassa HOM05D005166 ORTHO05D006120 3.8e-11 72.4 50 72.0
FAN21G1054 Fragaria x ananassa HOM05D005166 ORTHO05D006120 3.8e-11 72.4 50 72.0
FAN25G3327 Fragaria x ananassa HOM05D005166 ORTHO05D006120 3.8e-11 72.4 50 72.0
Manes.01G169300 Manihot esculenta HOM05D005166 ORTHO05D006120 5.0e-11 72.0 50 72.0
PGR102G2168 Punica granatum HOM05D005166 ORTHO05D006120 5.0e-11 72.0 214 30.8
Ca_20616_v3 Cicer arietinum L. HOM05D005166 ORTHO05D006120 6.5e-11 71.6 50 72.0
Lalb_Chr03g0026441 Lupinus albus HOM05D005166 ORTHO05D006120 6.5e-11 71.6 50 72.0
PSO339G5769 Papaver somniferum HOM05D005166 ORTHO05D006120 6.5e-11 71.6 50 70.0
Psat7g210320 Pisum sativum HOM05D005166 ORTHO05D006120 6.5e-11 71.6 50 72.0
MD11G1094700 Malus domestica HOM05D005166 ORTHO05D006120 8.4e-11 71.2 50 70.0
TPR.G23607 Trifolium pratense HOM05D005166 ORTHO05D006120 8.4e-11 71.2 50 72.0
CiPaw.13G089200 Carya illinoinensis HOM05D005166 ORTHO05D006120 1.1e-10 70.9 50 72.0
CDE06G0141 Ceratophyllum demersum HOM05D005166 ORTHO05D006120 1.1e-10 70.9 50 72.0
CDE07G0344 Ceratophyllum demersum HOM05D005166 ORTHO05D006120 1.1e-10 70.9 50 72.0
Cc01_g13350 Coffea canephora HOM05D005166 ORTHO05D006120 1.1e-10 70.9 50 72.0
Dinv34287 Davidia involucrata HOM05D005166 ORTHO05D006120 1.1e-10 70.9 50 72.0
Duzib168G0713 Durio zibethinus HOM05D005166 ORTHO05D006120 1.1e-10 70.9 50 72.0
Glyma.11G136000 Glycine max HOM05D005166 ORTHO05D006120 1.1e-10 70.9 50 70.0
Glyma.12G059700 Glycine max HOM05D005166 ORTHO05D006120 1.1e-10 70.9 50 70.0
Gohir.A13G226600 Gossypium hirsutum HOM05D005166 ORTHO05D006120 1.1e-10 70.9 50 72.0
Gohir.D13G232000 Gossypium hirsutum HOM05D005166 ORTHO05D006120 1.1e-10 70.9 50 72.0
Gorai.013G262700 Gossypium raimondii HOM05D005166 ORTHO05D006120 1.1e-10 70.9 50 72.0
Lj3g0025501 Lotus japonicus HOM05D005166 ORTHO05D006120 1.1e-10 70.9 50 70.0
MD03G1086100 Malus domestica HOM05D005166 ORTHO05D006120 1.1e-10 70.9 50 70.0
Phvul.011G061700 Phaseolus vulgaris HOM05D005166 ORTHO05D006120 1.1e-10 70.9 50 70.0
VMungo1127G2033 Vigna mungo HOM05D005166 ORTHO05D006120 1.1e-10 70.9 63 61.9
GSVIVG01024906001 Vitis vinifera HOM05D005166 ORTHO05D006120 1.1e-10 70.9 50 72.0
CSS0046995 Camellia sinensis var. sinensis HOM05D005166 ORTHO05D006120 1.9e-10 70.1 50 70.0
Potri.009G036900 Populus trichocarpa HOM05D005166 ORTHO05D006120 1.9e-10 70.1 50 70.0
Sabra09G0026100 Salix brachista HOM05D005166 ORTHO05D006120 1.9e-10 70.1 50 70.0
arahy.Tifrunner.gnm1.ann1.L8ZXQA Arachis hypogaea HOM05D005166 ORTHO05D006120 2.5e-10 69.7 50 70.0
Dinv17047 Davidia involucrata HOM05D005166 ORTHO05D006120 2.5e-10 69.7 50 70.0
Dinv42991 Davidia involucrata HOM05D005166 ORTHO05D006120 2.5e-10 69.7 50 70.0
Dinv43106 Davidia involucrata HOM05D005166 ORTHO05D006120 2.5e-10 69.7 50 70.0
Os03g0270200 Oryza sativa ssp. japonica HOM05D005166 ORTHO05D006120 2.5e-10 69.7 50 70.0
Potri.001G244600 Populus trichocarpa HOM05D005166 ORTHO05D006120 2.5e-10 69.7 50 70.0
Sabra16G0148400 Salix brachista HOM05D005166 ORTHO05D006120 2.5e-10 69.7 50 68.0
Thecc.09G315500 Theobroma cacao HOM05D005166 ORTHO05D006120 2.5e-10 69.7 50 70.0
AUR62001736 Chenopodium quinoa HOM05D005166 ORTHO05D006120 3.2e-10 69.3 50 68.0
AUR62020041 Chenopodium quinoa HOM05D005166 ORTHO05D006120 3.2e-10 69.3 50 68.0
Haze_24170 Corylus avellana HOM05D005166 ORTHO05D006120 3.2e-10 69.3 37 86.5
Haze_24175 Corylus avellana HOM05D005166 ORTHO05D006120 3.2e-10 69.3 37 86.5
Nitab4.5_0001999g0010 Nicotiana tabacum HOM05D005166 ORTHO05D006120 3.2e-10 69.3 50 70.0
Nitab4.5_0005248g0020 Nicotiana tabacum HOM05D005166 ORTHO05D006120 3.2e-10 69.3 50 70.0
Solyc09g030390.3 Solanum lycopersicum HOM05D005166 ORTHO05D006120 3.2e-10 69.3 50 70.0
Sopen09g013470 Solanum pennellii HOM05D005166 ORTHO05D006120 3.2e-10 69.3 50 70.0
PGSC0003DMG400027986 Solanum tuberosum HOM05D005166 ORTHO05D006120 3.2e-10 69.3 50 70.0
arahy.Tifrunner.gnm1.ann1.SP769B Arachis hypogaea HOM05D005166 ORTHO05D006120 5.5e-10 68.6 58 62.1
Nn2g11213 Nelumbo nucifera HOM05D005166 ORTHO05D006120 5.5e-10 68.6 50 68.0
Nn2g13459 Nelumbo nucifera HOM05D005166 ORTHO05D006120 5.5e-10 68.6 50 68.0
SHI05908 Sapria himalayana HOM05D005166 ORTHO05D006120 5.5e-10 68.6 39 82.1
Zm00001eb012100 Zea mays HOM05D005166 ORTHO05D006120 5.5e-10 68.6 50 68.0
MSTRG.21221 Avicennia marina HOM05D005166 ORTHO05D006120 7.1e-10 68.2 50 70.0
CBR_g50691 Chara braunii HOM05D005166 ORTHO05D006120 7.1e-10 68.2 50 70.0
THA.LOC104800686 Tarenaya hassleriana HOM05D005166 ORTHO05D006120 7.1e-10 68.2 50 68.0
TAR636G0020 Trochodendron aralioides HOM05D005166 ORTHO05D006120 7.1e-10 68.2 37 83.8
TAR636G0138 Trochodendron aralioides HOM05D005166 ORTHO05D006120 7.1e-10 68.2 37 83.8
Hma1.2p1_1664F.1_g296420 Hydrangea macrophylla HOM05D005166 ORTHO05D006120 9.3e-10 67.8 50 68.0
HPP92_012608 Vanilla planifolia HOM05D005166 ORTHO05D006120 9.3e-10 67.8 50 68.0
vmacro03027 Vaccinium macrocarpon HOM05D005166 ORTHO05D006120 1.2e-09 67.4 50 68.0
ATR0559G187 Amborella trichopoda HOM05D005166 ORTHO05D006120 1.6e-09 67.0 50 68.0
AL4G23770 Arabidopsis lyrata HOM05D005166 ORTHO05D006120 1.6e-09 67.0 50 68.0
Carub.0004s1023 Capsella rubella HOM05D005166 ORTHO05D006120 1.6e-09 67.0 50 68.0
DCAR_005942 Daucus carota HOM05D005166 ORTHO05D006120 1.6e-09 67.0 50 66.0
Thhalv10016250m.g Eutrema salsugineum HOM05D005166 ORTHO05D006120 1.6e-09 67.0 50 68.0
Sp4g12020 Schrenkiella parvula HOM05D005166 ORTHO05D006120 1.6e-09 67.0 50 68.0
AT2G29210 Arabidopsis thaliana HOM05D005166 ORTHO05D006120 2.1e-09 66.6 50 66.0
CAN.G3.46 Capsicum annuum HOM05D005166 ORTHO05D006120 2.1e-09 66.6 50 68.0
COL.COLO4_18578 Corchorus olitorius HOM05D005166 ORTHO05D006120 2.1e-09 66.6 50 68.0
Migut.D00877 Erythranthe guttata HOM05D005166 ORTHO05D006120 2.1e-09 66.6 50 68.0
SEGI_12829 Sequoiadendron giganteum HOM05D005166 ORTHO05D006120 2.1e-09 66.6 50 68.0
TAR633G1610 Trochodendron aralioides HOM05D005166 ORTHO05D006120 2.1e-09 66.6 50 68.0
AagrBONN_evm.TU.Sc2ySwM_117.3439 Anthoceros agrestis HOM05D005166 ORTHO05D006120 2.7e-09 66.2 50 68.0
A05p16120 Brassica napus HOM05D005166 ORTHO05D006120 2.7e-09 66.2 50 70.0
C04p21810 Brassica napus HOM05D005166 ORTHO05D006120 2.7e-09 66.2 50 70.0
BolC4t23701H Brassica oleracea HOM05D005166 ORTHO05D006120 2.7e-09 66.2 50 70.0
BraA05t20522Z Brassica rapa HOM05D005166 ORTHO05D006120 2.7e-09 66.2 50 70.0
Eucgr.B02307 Eucalyptus grandis HOM05D005166 ORTHO05D006120 2.7e-09 66.2 50 68.0
MBI14_g11598_MAGBIO Magnolia biondii HOM05D005166 ORTHO05D006120 2.7e-09 66.2 50 68.0
Hund04921 Selenicereus undatus HOM05D005166 ORTHO05D006120 2.7e-09 66.2 50 68.0
Aqoxy2G02310 Aquilegia oxysepala HOM05D005166 ORTHO05D006120 3.5e-09 65.9 37 83.8
EL10Ac7g16070 Beta vulgaris HOM05D005166 ORTHO05D006120 3.5e-09 65.9 50 66.0
Aa31LG5G7110 Aethionema arabicum HOM05D005166 ORTHO05D006120 4.6e-09 65.5 50 66.0
Ciclev10030390m.g Citrus clementina HOM05D005166 ORTHO05D006120 4.6e-09 65.5 50 66.0
Peaxi162Scf00676g00220 Petunia axillaris HOM05D005166 ORTHO05D006120 4.6e-09 65.5 50 66.0
Sed0011931 Sechium edule HOM05D005166 ORTHO05D006120 4.6e-09 65.5 50 66.0
CsaV3_1G034540 Cucumis sativus L. HOM05D005166 ORTHO05D006120 6.1e-09 65.1 50 66.0
Atru.chr3.3993_Atru.chr3.3994 Acer truncatum HOM05D005166 ORTHO05D006120 7.9e-09 64.7 50 64.0
BcaB02g10233 Brassica carinata HOM05D005166 ORTHO05D006120 1.0e-08 64.3 50 66.0
Rhsim13G0077000 Rhododendron simsii HOM05D005166 ORTHO05D006120 1.0e-08 64.3 237 29.1
Mapoly0063s0002 Marchantia polymorpha HOM05D005166 ORTHO05D006120 6.7e-08 61.6 37 78.4
Pp3c10_18390 Physcomitrium patens HOM05D005166 ORTHO05D006120 6.7e-08 61.6 35 82.9
Pp3c3_30240 Physcomitrium patens HOM05D005166 ORTHO05D006120 6.7e-08 61.6 35 82.9
Pp3c3_30241 Physcomitrium patens HOM05D005166 ORTHO05D006120 6.7e-08 61.6 35 82.9
SMO144G0189 Selaginella moellendorffii HOM05D005166 ORTHO05D006120 2.5e-07 59.7 50 58.0
Ah.08g220070 Amaranthus hybridus HOM05D005166 ORTHO05D006120 2.8e-06 56.2 43 65.1
Cpa.g.sc81.97 Carica papaya HOM05D005166 ORTHO05D006120 3.7e-06 55.8 44 63.6


User provided reference genes

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