Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0237001 Helianthus annuus HOM05D004332 ORTHO05D005116 5.7e-68 260.8 129 100.0
Lsat_1_v5_gn_9_23661 Lactuca sativa HOM05D004332 ORTHO05D005116 4.4e-60 234.6 129 87.6
Cc01_g13020 Coffea canephora HOM05D004332 ORTHO05D005116 1.7e-56 222.6 129 82.2
Dinv17021 Davidia involucrata HOM05D004332 ORTHO05D005116 2.2e-56 222.2 131 83.2
Dinv42969 Davidia involucrata HOM05D004332 ORTHO05D005116 2.2e-56 222.2 131 83.2
Dinv43130 Davidia involucrata HOM05D004332 ORTHO05D005116 2.2e-56 222.2 131 83.2
Rhsim01G0229500 Rhododendron simsii HOM05D004332 ORTHO05D005116 5.0e-56 221.1 129 82.2
CSS0035025 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 6.5e-56 220.7 131 82.4
Dinv04179 Davidia involucrata HOM05D004332 ORTHO05D005116 8.5e-56 220.3 131 83.2
GSVIVG01024938001 Vitis vinifera HOM05D004332 ORTHO05D005116 1.4e-55 219.5 130 83.1
COL.COLO4_18528 Corchorus olitorius HOM05D004332 ORTHO05D005116 1.9e-55 219.2 130 82.3
Actinidia34413 Actinidia chinensis HOM05D004332 ORTHO05D005116 2.5e-55 218.8 131 83.2
arahy.Tifrunner.gnm1.ann1.KAW7XL Arachis hypogaea HOM05D004332 ORTHO05D005116 2.5e-55 218.8 129 82.9
CiPaw.13G092600 Carya illinoinensis HOM05D004332 ORTHO05D005116 2.5e-55 218.8 129 83.7
Manes.01G172400 Manihot esculenta HOM05D004332 ORTHO05D005116 2.5e-55 218.8 130 81.5
CiPaw.14G067900 Carya illinoinensis HOM05D004332 ORTHO05D005116 3.2e-55 218.4 129 82.9
Manes.02G131400 Manihot esculenta HOM05D004332 ORTHO05D005116 4.2e-55 218.0 130 83.1
Actinidia37195 Actinidia chinensis HOM05D004332 ORTHO05D005116 9.4e-55 216.9 129 82.2
TWI31G0816 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 1.2e-54 216.5 129 79.8
Gohir.A05G094800 Gossypium hirsutum HOM05D004332 ORTHO05D005116 3.6e-54 214.9 130 80.8
Gohir.D05G095080 Gossypium hirsutum HOM05D004332 ORTHO05D005116 3.6e-54 214.9 130 80.8
Gohir.D05G095200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 4.7e-54 214.5 130 80.8
Lalb_Chr19g0137881 Lupinus albus HOM05D004332 ORTHO05D005116 4.7e-54 214.5 129 79.8
MD03G1090100 Malus domestica HOM05D004332 ORTHO05D005116 4.7e-54 214.5 132 81.1
TWI75G0441 Tripterygium wilfordii HOM05D004332 ORTHO05D005116 4.7e-54 214.5 129 79.8
Prupe.6G074300 Prunus persica HOM05D004332 ORTHO05D005116 6.1e-54 214.2 133 80.5
CANSAT54G0234 Cannabis sativa HOM05D004332 ORTHO05D005116 7.9e-54 213.8 129 82.9
MBI05_g28381_MAGBIO Magnolia biondii HOM05D004332 ORTHO05D005116 7.9e-54 213.8 129 77.5
Thecc.09G319900 Theobroma cacao HOM05D004332 ORTHO05D005116 1.0e-53 213.4 130 80.0
CSS0027892 Camellia sinensis var. sinensis HOM05D004332 ORTHO05D005116 1.4e-53 213.0 133 78.9
Gohir.A03G043200 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.4e-53 213.0 130 80.0
Gohir.D03G124100 Gossypium hirsutum HOM05D004332 ORTHO05D005116 2.3e-53 212.2 130 79.2
MD11G1099700 Malus domestica HOM05D004332 ORTHO05D005116 2.3e-53 212.2 134 79.9
Eucgr.J02045 Eucalyptus grandis HOM05D004332 ORTHO05D005116 3.0e-53 211.8 133 79.7
TAR633G2148 Trochodendron aralioides HOM05D004332 ORTHO05D005116 3.0e-53 211.8 129 79.8
Duzib168G2052 Durio zibethinus HOM05D004332 ORTHO05D005116 3.9e-53 211.5 130 78.5
Lalb_Chr03g0026581 Lupinus albus HOM05D004332 ORTHO05D005116 3.9e-53 211.5 129 78.3
ECA247G3838 Erigeron canadensis HOM05D004332 ORTHO05D005116 6.7e-53 210.7 128 84.4
Rhsim13G0081500 Rhododendron simsii HOM05D004332 ORTHO05D005116 6.7e-53 210.7 129 77.5
Gorai.009G098500 Gossypium raimondii HOM05D004332 ORTHO05D005116 8.8e-53 210.3 130 80.0
QL01p031517 Quercus lobata HOM05D004332 ORTHO05D005116 1.1e-52 209.9 128 77.3
Duzib150G0187 Durio zibethinus HOM05D004332 ORTHO05D005116 1.5e-52 209.5 129 79.8
Carub.0008s2008 Capsella rubella HOM05D004332 ORTHO05D005116 2.0e-52 209.1 132 77.3
Glyma.11G138900 Glycine max HOM05D004332 ORTHO05D005116 2.0e-52 209.1 129 78.3
Gorai.003G130800 Gossypium raimondii HOM05D004332 ORTHO05D005116 2.0e-52 209.1 131 78.6
Sp6g21090 Schrenkiella parvula HOM05D004332 ORTHO05D005116 2.0e-52 209.1 129 78.3
FAN16G1081 Fragaria x ananassa HOM05D004332 ORTHO05D005116 2.6e-52 208.8 129 80.6
Nn2g11136 Nelumbo nucifera HOM05D004332 ORTHO05D005116 2.6e-52 208.8 129 77.5
RcHm_v2.0_Chr5g0065351 Rosa chinensis HOM05D004332 ORTHO05D005116 2.6e-52 208.8 127 80.3
THA.LOC104814879 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 2.6e-52 208.8 129 77.5
Oeu017398.1 Olea europaea HOM05D004332 ORTHO05D005116 3.3e-52 208.4 132 77.3
Potri.009G032100 Populus trichocarpa HOM05D004332 ORTHO05D005116 3.3e-52 208.4 134 78.4
ATR0559G209 Amborella trichopoda HOM05D004332 ORTHO05D005116 4.4e-52 208.0 129 78.3
AL8G35880 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 5.7e-52 207.6 130 77.7
FAN25G2250 Fragaria x ananassa HOM05D004332 ORTHO05D005116 5.7e-52 207.6 129 80.6
Hma1.2p1_0615F.1_g189860 Hydrangea macrophylla HOM05D004332 ORTHO05D005116 5.7e-52 207.6 129 79.1
AT5G59410 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 9.7e-52 206.8 131 77.1
CARHR285780 Cardamine hirsuta HOM05D004332 ORTHO05D005116 9.7e-52 206.8 132 77.3
Migut.N00901 Erythranthe guttata HOM05D004332 ORTHO05D005116 9.7e-52 206.8 131 77.1
Glyma.12G062500 Glycine max HOM05D004332 ORTHO05D005116 9.7e-52 206.8 129 76.7
FvH4_3g36490 Fragaria vesca HOM05D004332 ORTHO05D005116 1.3e-51 206.5 129 79.8
FAN11G3576 Fragaria x ananassa HOM05D004332 ORTHO05D005116 1.3e-51 206.5 129 79.8
SGA_v2.0_scaffold132G34538 Striga asiatica HOM05D004332 ORTHO05D005116 1.3e-51 206.5 131 77.1
Thhalv10015001m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 1.7e-51 206.1 132 78.0
ClCG03G001410 Citrullus lanatus HOM05D004332 ORTHO05D005116 2.2e-51 205.7 129 79.1
Sed0019241 Sechium edule HOM05D004332 ORTHO05D005116 2.2e-51 205.7 129 76.7
TPR.G34281 Trifolium pratense HOM05D004332 ORTHO05D005116 2.2e-51 205.7 129 79.8
unitig_6.g29275 Utricularia gibba HOM05D004332 ORTHO05D005116 2.2e-51 205.7 130 76.2
unitig_747.g21434 Utricularia gibba HOM05D004332 ORTHO05D005116 2.2e-51 205.7 130 76.2
Ciclev10029562m.g Citrus clementina HOM05D004332 ORTHO05D005116 3.7e-51 204.9 134 76.1
SalBow2G0012 Salvia bowleyana HOM05D004332 ORTHO05D005116 3.7e-51 204.9 134 73.9
Sc12g0001450 Simmondsia chinensis HOM05D004332 ORTHO05D005116 3.7e-51 204.9 129 78.3
MELO3C025906.2 Cucumis melo HOM05D004332 ORTHO05D005116 1.4e-50 203.0 130 76.2
Gohir.A07G099000 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.4e-50 203.0 129 77.5
Hund04945 Selenicereus undatus HOM05D004332 ORTHO05D005116 1.4e-50 203.0 129 76.0
VMungo1127G1024 Vigna mungo HOM05D004332 ORTHO05D005116 1.4e-50 203.0 129 77.5
AUR62009559 Chenopodium quinoa HOM05D004332 ORTHO05D005116 1.8e-50 202.6 129 75.2
CsaV3_6G016760 Cucumis sativus L. HOM05D004332 ORTHO05D005116 1.8e-50 202.6 130 75.4
Gohir.D07G103500 Gossypium hirsutum HOM05D004332 ORTHO05D005116 1.8e-50 202.6 128 76.6
MELO3C020622.2 Cucumis melo HOM05D004332 ORTHO05D005116 2.4e-50 202.2 129 77.5
Oeu002423.1 Olea europaea HOM05D004332 ORTHO05D005116 2.4e-50 202.2 131 74.0
THA.LOC104810775 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 2.4e-50 202.2 129 76.0
Ah.08g219640 Amaranthus hybridus HOM05D004332 ORTHO05D005116 3.1e-50 201.8 129 73.6
CsaV3_1G034360 Cucumis sativus L. HOM05D004332 ORTHO05D005116 3.1e-50 201.8 129 76.7
Psat5g286720 Pisum sativum HOM05D004332 ORTHO05D005116 3.1e-50 201.8 125 80.0
EL10Ac7g16034 Beta vulgaris HOM05D004332 ORTHO05D005116 4.1e-50 201.4 129 75.2
Potri.001G241500 Populus trichocarpa HOM05D004332 ORTHO05D005116 4.1e-50 201.4 129 77.5
Sc21g0005870 Simmondsia chinensis HOM05D004332 ORTHO05D005116 4.1e-50 201.4 129 79.8
Phvul.011G063600 Phaseolus vulgaris HOM05D004332 ORTHO05D005116 7.0e-50 200.7 129 76.0
vmacro14542 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 9.1e-50 200.3 117 82.1
Oeu064111.2 Olea europaea HOM05D004332 ORTHO05D005116 1.2e-49 199.9 129 72.1
Aa31sc23G410 Aethionema arabicum HOM05D004332 ORTHO05D005116 2.0e-49 199.1 132 73.5
AUR62001771 Chenopodium quinoa HOM05D004332 ORTHO05D005116 2.6e-49 198.7 129 73.6
ClCG02G020050 Citrullus lanatus HOM05D004332 ORTHO05D005116 3.5e-49 198.4 129 75.2
Sed0025770 Sechium edule HOM05D004332 ORTHO05D005116 3.5e-49 198.4 129 74.4
Lj3g0024178 Lotus japonicus HOM05D004332 ORTHO05D005116 4.5e-49 198.0 129 74.4
Medtr2g097270 Medicago truncatula HOM05D004332 ORTHO05D005116 4.5e-49 198.0 125 78.4
PGR102G2585 Punica granatum HOM05D004332 ORTHO05D005116 5.9e-49 197.6 131 77.9
Nitab4.5_0000463g0140 Nicotiana tabacum HOM05D004332 ORTHO05D005116 7.7e-49 197.2 130 75.4
Sed0013921 Sechium edule HOM05D004332 ORTHO05D005116 7.7e-49 197.2 130 73.8
Nitab4.5_0001326g0120 Nicotiana tabacum HOM05D004332 ORTHO05D005116 1.0e-48 196.8 130 75.4
Carub.0004s1001 Capsella rubella HOM05D004332 ORTHO05D005116 1.3e-48 196.4 133 73.7
CARHR122250 Cardamine hirsuta HOM05D004332 ORTHO05D005116 2.2e-48 195.7 133 73.7
CDE04G0625 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 2.2e-48 195.7 126 73.0
Thhalv10017410m.g Eutrema salsugineum HOM05D004332 ORTHO05D005116 2.2e-48 195.7 133 73.7
SEGI_11468 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 2.2e-48 195.7 133 71.4
BraA04t17767Z Brassica rapa HOM05D004332 ORTHO05D005116 2.9e-48 195.3 133 72.2
A04p21990 Brassica napus HOM05D004332 ORTHO05D005116 3.8e-48 194.9 133 71.4
Sabra16G0146000 Salix brachista HOM05D004332 ORTHO05D005116 3.8e-48 194.9 145 71.7
arahy.Tifrunner.gnm1.ann1.WMUR0J Arachis hypogaea HOM05D004332 ORTHO05D005116 6.5e-48 194.1 116 81.0
Aa31LG5G7210 Aethionema arabicum HOM05D004332 ORTHO05D005116 8.5e-48 193.7 133 72.2
BcaB06g28270 Brassica carinata HOM05D004332 ORTHO05D005116 8.5e-48 193.7 133 71.4
BcaC02g08120 Brassica carinata HOM05D004332 ORTHO05D005116 8.5e-48 193.7 133 70.7
C04p58150 Brassica napus HOM05D004332 ORTHO05D005116 8.5e-48 193.7 133 70.7
BolC4t27343H Brassica oleracea HOM05D004332 ORTHO05D005116 1.1e-47 193.4 133 70.7
PSO151G0214 Papaver somniferum HOM05D004332 ORTHO05D005116 1.5e-47 193.0 129 71.3
PSO339G1935 Papaver somniferum HOM05D004332 ORTHO05D005116 2.5e-47 192.2 129 71.3
AL146U10030 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 3.2e-47 191.8 133 70.7
AT2G29020 Arabidopsis thaliana HOM05D004332 ORTHO05D005116 4.2e-47 191.4 130 71.5
PGSC0003DMG400030417 Solanum tuberosum HOM05D004332 ORTHO05D005116 4.2e-47 191.4 126 74.6
THA.LOC104800671 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 4.2e-47 191.4 132 70.5
Gorai.001G111400 Gossypium raimondii HOM05D004332 ORTHO05D005116 5.5e-47 191.0 121 75.2
THA.LOC104826319 Tarenaya hassleriana HOM05D004332 ORTHO05D005116 7.2e-47 190.7 133 72.9
BcaC02g11036 Brassica carinata HOM05D004332 ORTHO05D005116 9.4e-47 190.3 134 69.4
C04p21940 Brassica napus HOM05D004332 ORTHO05D005116 9.4e-47 190.3 134 69.4
BolC4t23714H Brassica oleracea HOM05D004332 ORTHO05D005116 9.4e-47 190.3 134 69.4
CDE07G0755 Ceratophyllum demersum HOM05D004332 ORTHO05D005116 9.4e-47 190.3 129 68.2
CAN.G394.64 Capsicum annuum HOM05D004332 ORTHO05D005116 1.2e-46 189.9 128 71.1
Aqoxy1G00923 Aquilegia oxysepala HOM05D004332 ORTHO05D005116 1.6e-46 189.5 129 72.1
TAR636G3330 Trochodendron aralioides HOM05D004332 ORTHO05D005116 1.6e-46 189.5 118 78.8
BcaB02g10224 Brassica carinata HOM05D004332 ORTHO05D005116 2.1e-46 189.1 136 69.9
A07p19440 Brassica napus HOM05D004332 ORTHO05D005116 2.1e-46 189.1 134 68.7
BraA07t29650Z Brassica rapa HOM05D004332 ORTHO05D005116 2.1e-46 189.1 134 68.7
Sp4g11830 Schrenkiella parvula HOM05D004332 ORTHO05D005116 2.7e-46 188.7 133 71.4
Solyc06g076260.3 Solanum lycopersicum HOM05D004332 ORTHO05D005116 2.7e-46 188.7 130 70.0
Lsat_1_v5_gn_8_73521 Lactuca sativa HOM05D004332 ORTHO05D005116 4.7e-46 188.0 121 77.7
arahy.Tifrunner.gnm1.ann1.TT4C38 Arachis hypogaea HOM05D004332 ORTHO05D005116 6.1e-46 187.6 126 73.8
DCAR_018915 Daucus carota HOM05D004332 ORTHO05D005116 8.0e-46 187.2 120 74.2
arahy.Tifrunner.gnm1.ann1.A22IES Arachis hypogaea HOM05D004332 ORTHO05D005116 5.2e-45 184.5 121 73.6
Sabra09G0022800 Salix brachista HOM05D004332 ORTHO05D005116 5.2e-45 184.5 121 77.7
Atru.chr3.3947 Acer truncatum HOM05D004332 ORTHO05D005116 6.7e-45 184.1 137 71.5
HanXRQChr07g0197291 Helianthus annuus HOM05D004332 ORTHO05D005116 2.6e-44 182.2 138 71.0
Zm00001eb266910 Zea mays HOM05D004332 ORTHO05D005116 1.0e-40 170.2 118 68.6
Os05g0110600 Oryza sativa ssp. japonica HOM05D004332 ORTHO05D005116 1.3e-40 169.9 129 62.0
Mapoly0045s0062 Marchantia polymorpha HOM05D004332 ORTHO05D005116 1.7e-40 169.5 131 60.3
Pp3c16_16760 Physcomitrium patens HOM05D004332 ORTHO05D005116 6.5e-40 167.5 115 70.4
SMO304G0081 Selaginella moellendorffii HOM05D004332 ORTHO05D005116 4.2e-39 164.9 130 58.5
Nn2g13368 Nelumbo nucifera HOM05D004332 ORTHO05D005116 5.5e-39 164.5 91 84.6
AagrBONN_evm.TU.Sc2ySwM_228.3328 Anthoceros agrestis HOM05D004332 ORTHO05D005116 8.8e-37 157.1 131 63.4
Pp3c6_17300 Physcomitrium patens HOM05D004332 ORTHO05D005116 4.5e-33 144.8 114 57.9
Actinidia07026 Actinidia chinensis HOM05D004332 ORTHO05D005116 4.7e-30 134.8 85 78.8
Sopen06g032690 Solanum pennellii HOM05D004332 ORTHO05D005116 4.0e-29 131.7 78 78.2
Haze_24115 Corylus avellana HOM05D004332 ORTHO05D005116 1.1e-26 123.6 75 81.3
TAR369G0503 Trochodendron aralioides HOM05D004332 ORTHO05D005116 1.1e-23 113.6 74 71.6
vmacro03061 Vaccinium macrocarpon HOM05D004332 ORTHO05D005116 1.5e-23 113.2 72 75.0
FAN21G1178 Fragaria x ananassa HOM05D004332 ORTHO05D005116 4.3e-23 111.7 72 76.4
SEGI_12680 Sequoiadendron giganteum HOM05D004332 ORTHO05D005116 4.7e-22 108.2 80 65.0
AL4G23580 Arabidopsis lyrata HOM05D004332 ORTHO05D005116 4.0e-21 105.1 76 67.1
Peaxi162Scf00774g00129 Petunia axillaris HOM05D004332 ORTHO05D005116 4.4e-20 101.7 56 85.7
Actinidia23932 Actinidia chinensis HOM05D004332 ORTHO05D005116 1.3e-19 100.1 60 81.7
SHI47893 Sapria himalayana HOM05D004332 ORTHO05D005116 2.8e-14 82.4 50 74.0
HPP92_028206 Vanilla planifolia HOM05D004332 ORTHO05D005116 4.4e-12 75.1 45 75.6
Cre08.g376000 Chlamydomonas reinhardtii HOM05D004332 ORTHO05D005116 2.2e-11 72.8 95 34.7
Eucgr.H02119 Eucalyptus grandis HOM05D004332 ORTHO05D005116 6.6e-08 61.2 50 62.0


User provided reference genes

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