Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 4.5e-161 571.2 293 100.0
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 3.1e-114 415.6 306 73.5
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 1.2e-105 387.1 293 70.0
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 1.6e-102 376.7 297 66.3
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 8.0e-102 374.4 293 67.6
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 8.0e-102 374.4 293 67.6
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 1.8e-101 373.2 300 66.0
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 6.8e-101 371.3 295 65.4
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 5.7e-100 368.2 295 65.8
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 7.5e-100 367.9 295 66.4
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.3e-99 367.1 295 65.4
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 1.7e-99 366.7 294 65.6
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 4.8e-99 365.2 295 65.8
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 8.3e-99 364.4 304 63.2
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 1.8e-98 363.2 298 64.8
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 2.4e-98 362.8 291 65.3
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 5.4e-98 361.7 305 64.9
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 9.1e-98 360.9 301 63.5
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 1.2e-97 360.5 296 65.9
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 1.6e-97 360.1 296 66.6
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 1.6e-97 360.1 296 65.2
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 2.0e-97 359.8 291 63.9
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 2.7e-97 359.4 266 67.7
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 3.5e-97 359.0 295 63.7
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 3.5e-97 359.0 304 62.8
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 4.5e-97 358.6 296 64.5
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 4.5e-97 358.6 295 63.7
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 4.5e-97 358.6 294 63.3
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 1.7e-96 356.7 294 64.3
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 2.3e-96 356.3 291 63.9
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 2.9e-96 355.9 293 63.1
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 3.8e-96 355.5 295 63.4
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 3.8e-96 355.5 283 66.1
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 5.0e-96 355.1 269 66.9
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 5.0e-96 355.1 293 64.5
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 5.0e-96 355.1 292 63.0
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 6.6e-96 354.8 300 62.3
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 6.6e-96 354.8 266 68.0
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 1.5e-95 353.6 293 63.5
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 1.9e-95 353.2 293 63.1
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 1.9e-95 353.2 305 61.6
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 3.3e-95 352.4 297 65.0
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 5.5e-95 351.7 294 64.3
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 7.2e-95 351.3 294 64.3
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 9.5e-95 350.9 295 64.1
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 9.5e-95 350.9 295 64.1
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 1.2e-94 350.5 308 60.7
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 1.2e-94 350.5 308 60.7
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 1.6e-94 350.1 293 63.1
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 2.1e-94 349.7 265 65.3
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 2.8e-94 349.4 267 67.0
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 4.7e-94 348.6 295 62.4
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 1.0e-93 347.4 295 62.4
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 1.4e-93 347.1 265 65.7
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 1.4e-93 347.1 309 59.9
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 1.8e-93 346.7 269 66.5
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 1.8e-93 346.7 269 66.5
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 4.0e-93 345.5 269 66.2
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 4.0e-93 345.5 292 63.4
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 5.2e-93 345.1 270 65.9
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 8.9e-93 344.4 315 60.3
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 1.2e-92 344.0 269 66.5
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 1.2e-92 344.0 289 64.0
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 2.6e-92 342.8 300 63.0
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 2.6e-92 342.8 291 62.9
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 4.4e-92 342.0 292 63.4
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 9.8e-92 340.9 265 65.3
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 1.3e-91 340.5 269 65.8
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 1.7e-91 340.1 292 61.6
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 2.2e-91 339.7 287 61.0
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 2.8e-91 339.3 267 66.7
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 4.9e-91 338.6 293 62.8
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 4.9e-91 338.6 271 65.3
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 1.4e-90 337.0 301 61.8
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 3.1e-90 335.9 269 65.1
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 3.1e-90 335.9 269 65.1
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 3.1e-90 335.9 293 62.1
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 4.1e-90 335.5 269 64.7
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 4.1e-90 335.5 295 61.4
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 5.4e-90 335.1 293 61.8
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 1.2e-89 334.0 293 59.0
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 1.2e-89 334.0 260 70.4
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 1.6e-89 333.6 269 64.3
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 1.6e-89 333.6 267 66.3
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 1.6e-89 333.6 297 61.3
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 2.0e-89 333.2 294 61.6
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 3.5e-89 332.4 290 61.4
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 3.5e-89 332.4 271 63.1
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 7.8e-89 331.3 294 60.9
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 2.3e-88 329.7 317 58.0
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 5.0e-88 328.6 302 59.3
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 5.6e-87 325.1 294 60.5
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 7.3e-87 324.7 299 60.2
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 1.2e-86 323.9 268 61.6
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 3.6e-86 322.4 371 50.4
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 1.8e-85 320.1 264 62.5
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 2.6e-84 316.2 252 65.9
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 4.4e-84 315.5 287 61.0
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 4.4e-84 315.5 274 58.8
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 1.1e-82 310.8 278 57.6
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 1.9e-82 310.1 269 58.4
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 1.6e-78 297.0 243 63.4
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 2.1e-78 296.6 258 62.0
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.1e-78 296.6 204 71.1
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 2.8e-78 296.2 448 42.4
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 4.1e-74 282.3 253 60.5
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 2.3e-72 276.6 271 51.7
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 6.2e-70 268.5 255 55.3
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 8.1e-70 268.1 202 67.3
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 4.9e-67 258.8 178 73.0
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 1.4e-66 257.3 273 47.6
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 2.8e-62 243.0 269 46.8
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 2.8e-62 243.0 258 47.7
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 1.1e-61 241.1 262 51.1
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 4.4e-60 235.7 292 49.7
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 9.9e-60 234.6 269 50.9
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 2.9e-59 233.0 292 49.0
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 7.1e-58 228.4 254 47.2
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 1.6e-57 227.3 254 45.7
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 7.8e-57 224.9 251 54.2
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 5.1e-56 222.2 256 44.1
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 5.8e-52 208.8 262 43.1
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 7.6e-52 208.4 166 65.7
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 3.8e-51 206.1 170 67.1
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 6.0e-49 198.7 170 65.3
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 1.5e-47 194.1 255 48.2
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 1.6e-46 190.7 207 53.1
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 1.7e-43 180.6 142 67.6
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 1.3e-32 144.4 134 55.2
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 1.3e-30 137.9 133 53.4
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.8e-29 134.0 117 61.5
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 1.2e-20 104.8 119 49.6
ATR0051G031 Amborella trichopoda HOM05D005681 ORTHO05D007274 4.8e-14 82.8 84 50.0
BraA03t15198Z Brassica rapa HOM05D005681 ORTHO05D040333 1.1e-07 61.6 169 34.3
A03p61560 Brassica napus HOM05D005681 ORTHO05D040333 2.6e-07 60.5 149 34.9


User provided reference genes

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