Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0236091 Helianthus annuus HOM05D006320 ORTHO05D007069 3.4e-24 114.4 67 100.0
HanXRQMTg0579331 Helianthus annuus HOM05D006320 ORTHO05D007069 3.4e-24 114.4 67 100.0
HanXRQChr16g0504511 Helianthus annuus HOM05D006320 ORTHO05D007069 1.7e-23 112.1 67 98.5
SHI40315 Sapria himalayana HOM05D006320 ORTHO05D007069 4.2e-14 80.9 75 70.7
Sed0021840 Sechium edule HOM05D006320 ORTHO05D007069 9.3e-14 79.7 74 70.3
LjContig00439g0017906 Lotus japonicus HOM05D006320 ORTHO05D007069 1.6e-13 79.0 75 69.3
LjContig00446g0026709 Lotus japonicus HOM05D006320 ORTHO05D007069 1.6e-13 79.0 75 69.3
SalBow1G1899 Salvia bowleyana HOM05D006320 ORTHO05D007069 1.6e-13 79.0 75 69.3
Lalb_Chr00c24g0406831 Lupinus albus HOM05D006320 ORTHO05D007069 4.6e-13 77.4 76 67.1
Lalb_Chr11g0070071 Lupinus albus HOM05D006320 ORTHO05D007069 4.6e-13 77.4 76 67.1
arahy.Tifrunner.gnm1.ann1.5U23EP Arachis hypogaea HOM05D006320 ORTHO05D007069 7.9e-13 76.6 75 68.0
arahy.Tifrunner.gnm1.ann1.YTYD5C Arachis hypogaea HOM05D006320 ORTHO05D007069 7.9e-13 76.6 75 68.0
Phvul.005G088454 Phaseolus vulgaris HOM05D006320 ORTHO05D007069 7.9e-13 76.6 75 68.0
RcHm_v2.0_MTg0498361 Rosa chinensis HOM05D006320 ORTHO05D007069 7.9e-13 76.6 76 65.8
SHI36586 Sapria himalayana HOM05D000743 ORTHO05D000580 1.0e-12 76.3 74 64.9
SHI39988 Sapria himalayana HOM05D006320 ORTHO05D007069 1.0e-12 76.3 72 70.8
SHI54307 Sapria himalayana HOM05D006320 ORTHO05D007069 1.0e-12 76.3 72 70.8
Aqoxy12s033 Aquilegia oxysepala HOM05D006320 ORTHO05D007069 1.3e-12 75.9 75 66.7
SHI36772 Sapria himalayana HOM05D000743 ORTHO05D000580 1.3e-12 75.9 74 66.2
SHI36783 Sapria himalayana HOM05D000743 ORTHO05D000580 1.3e-12 75.9 74 66.2
AT2G07671 Arabidopsis thaliana HOM05D006320 ORTHO05D007069 1.8e-12 75.5 76 65.8
ATMG01080 Arabidopsis thaliana HOM05D006320 ORTHO05D007069 1.8e-12 75.5 76 65.8
BolSC28t60384H Brassica oleracea HOM05D006320 ORTHO05D007069 1.8e-12 75.5 76 65.8
BolSC28t60392H Brassica oleracea HOM05D006320 ORTHO05D007069 1.8e-12 75.5 76 65.8
BolSC28t60418H Brassica oleracea HOM05D006320 ORTHO05D007069 1.8e-12 75.5 76 65.8
BraSC224t45817Z Brassica rapa HOM05D006320 ORTHO05D007069 1.8e-12 75.5 76 65.8
Thhalv10023008m.g Eutrema salsugineum HOM05D006320 ORTHO05D007069 1.8e-12 75.5 76 65.8
CARHR287930 Cardamine hirsuta HOM05D006320 ORTHO05D007069 2.3e-12 75.1 75 68.0
AL5G20340 Arabidopsis lyrata HOM05D006320 ORTHO05D007069 3.0e-12 74.7 75 66.7
SHI38846 Sapria himalayana HOM05D006320 ORTHO05D007069 3.0e-12 74.7 72 68.1
SHI36018 Sapria himalayana HOM05D000743 ORTHO05D000580 3.9e-12 74.3 74 64.9
SHI39753 Sapria himalayana HOM05D006320 ORTHO05D007069 3.9e-12 74.3 72 69.4
SHI53429 Sapria himalayana HOM05D006320 ORTHO05D007069 3.9e-12 74.3 72 69.4
CsaV3_UNG209120 Cucumis sativus L. HOM05D006320 ORTHO05D007069 5.1e-12 73.9 74 66.2
SHI46272 Sapria himalayana HOM05D000743 ORTHO05D000580 5.1e-12 73.9 74 63.5
PGR028G0009 Punica granatum HOM05D006320 ORTHO05D007069 6.7e-12 73.6 74 66.2
Lalb_Chr10g0093911 Lupinus albus HOM05D006320 ORTHO05D007069 8.7e-12 73.2 75 66.7
SHI35484 Sapria himalayana HOM05D006320 ORTHO05D007069 8.7e-12 73.2 72 69.4
Ah.10g028420 Amaranthus hybridus HOM05D006320 ORTHO05D007069 1.1e-11 72.8 74 66.2
SHI15099 Sapria himalayana HOM05D006320 ORTHO05D007069 1.1e-11 72.8 68 70.6
SHI48649 Sapria himalayana HOM05D006320 ORTHO05D007069 1.1e-11 72.8 72 68.1
SHI37852 Sapria himalayana HOM05D006320 ORTHO05D007069 1.5e-11 72.4 75 65.3
AUR62042330 Chenopodium quinoa HOM05D006320 ORTHO05D007069 2.5e-11 71.6 72 63.9
SHI35237 Sapria himalayana HOM05D006320 ORTHO05D007069 2.5e-11 71.6 72 66.7
SHI46360 Sapria himalayana HOM05D006320 ORTHO05D007069 2.5e-11 71.6 72 66.7
Hund27557 Selenicereus undatus HOM05D001750 ORTHO05D007069 2.5e-11 71.6 74 64.9
Hma1.2p1_1191F.1_g265490 Hydrangea macrophylla HOM05D006320 ORTHO05D007069 3.3e-11 71.2 74 64.9
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 3.3e-11 71.2 80 60.0
SHI49662 Sapria himalayana HOM05D006320 ORTHO05D007069 3.3e-11 71.2 72 69.4
Phvul.011G124000 Phaseolus vulgaris HOM05D006320 ORTHO05D007069 4.3e-11 70.9 74 63.5
SHI36936 Sapria himalayana HOM05D000743 ORTHO05D000580 4.3e-11 70.9 74 62.2
SHI37011 Sapria himalayana HOM05D000743 ORTHO05D000580 4.3e-11 70.9 74 62.2
SHI35327 Sapria himalayana HOM05D001560 ORTHO05D003613 7.4e-11 70.1 71 63.4
Aa31sc483G20 Aethionema arabicum HOM05D006320 ORTHO05D007069 9.6e-11 69.7 76 67.1
Cfa022996 Carpinus fangiana HOM05D001750 ORTHO05D001825 9.6e-11 69.7 74 64.9
SHI53047 Sapria himalayana HOM05D006320 ORTHO05D007069 9.6e-11 69.7 72 66.7
arahy.Tifrunner.gnm1.ann1.XSHW5Z Arachis hypogaea HOM05D006320 ORTHO05D007069 1.3e-10 69.3 69 63.8
C01p34910 Brassica napus HOM05D006320 ORTHO05D007069 1.6e-10 68.9 72 62.5
BolC1t03457H Brassica oleracea HOM05D006320 ORTHO05D007069 1.6e-10 68.9 72 62.5
SHI27343 Sapria himalayana HOM05D006320 ORTHO05D007069 1.6e-10 68.9 72 65.3
SHI34615 Sapria himalayana HOM05D000743 ORTHO05D000580 1.6e-10 68.9 74 59.5
SHI39076 Sapria himalayana HOM05D006320 ORTHO05D007069 2.1e-10 68.6 72 65.3
SHI42051 Sapria himalayana HOM05D006320 ORTHO05D007069 2.1e-10 68.6 72 65.3
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 3.7e-10 67.8 67 64.2
RhsimMtG0004200 Rhododendron simsii HOM05D006320 ORTHO05D007069 4.8e-10 67.4 75 61.3
C01p34830 Brassica napus HOM05D006320 ORTHO05D007069 6.2e-10 67.0 73 60.3
SHI50161 Sapria himalayana HOM05D006320 ORTHO05D007069 6.2e-10 67.0 72 63.9
CANSAT16G0023 Cannabis sativa HOM05D006320 ORTHO05D007069 8.2e-10 66.6 74 60.8
ECA234G4202 Erigeron canadensis HOM05D006320 ORTHO05D007069 1.8e-09 65.5 75 60.0
SHI36574 Sapria himalayana HOM05D006320 ORTHO05D007069 2.4e-09 65.1 61 72.1
Sc08g0004920 Simmondsia chinensis HOM05D006320 ORTHO05D007069 2.4e-09 65.1 75 58.7
SHI41242 Sapria himalayana HOM05D006320 ORTHO05D007069 3.1e-09 64.7 69 66.7
CANSAT21G1924 Cannabis sativa HOM05D006320 ORTHO05D007069 5.3e-09 63.9 77 58.4
HanXRQMTg0579361 Helianthus annuus HOM05D001750 ORTHO05D001825 5.3e-09 63.9 75 58.7
Dinv18904 Davidia involucrata HOM05D001750 ORTHO05D001825 9.0e-09 63.2 75 60.0
ECA041G0001 Erigeron canadensis HOM05D001750 ORTHO05D001825 9.0e-09 63.2 74 59.5
Lsat_1_v5_gn_8_111781 Lactuca sativa HOM05D006320 ORTHO05D007069 9.0e-09 63.2 74 59.5
Psat1g120760 Pisum sativum HOM05D012609 ORTHO05D007069 9.0e-09 63.2 67 62.7
SalBow6G3944 Salvia bowleyana HOM05D006320 ORTHO05D007069 1.2e-08 62.8 75 60.0
CDE02G4101 Ceratophyllum demersum HOM05D006320 ORTHO05D007069 1.5e-08 62.4 74 60.8
Dinv06672 Davidia involucrata HOM05D001750 ORTHO05D001825 1.5e-08 62.4 74 60.8
SHI34625 Sapria himalayana HOM05D000743 ORTHO05D000580 1.5e-08 62.4 68 60.3
Dinv06715 Davidia involucrata HOM05D006320 ORTHO05D007069 2.0e-08 62.0 70 61.4
Nitab4.5_0002326g0030 Nicotiana tabacum HOM05D006320 ORTHO05D007069 2.0e-08 62.0 74 59.5
Gohir.D07G024400 Gossypium hirsutum HOM05D006320 ORTHO05D007069 2.6e-08 61.6 67 61.2
SGA_v2.0_scaffold255G45504 Striga asiatica HOM05D006320 ORTHO05D007069 3.4e-08 61.2 60 63.3
SalBow8G4348 Salvia bowleyana HOM05D006320 ORTHO05D007069 4.5e-08 60.8 75 61.3
ECA039G0010 Erigeron canadensis HOM05D001750 ORTHO05D001825 7.6e-08 60.1 71 60.6
Nitab4.5_0000172g0580 Nicotiana tabacum HOM05D006320 ORTHO05D007069 1.7e-07 58.9 74 55.4
SHI35481 Sapria himalayana HOM05D000890 ORTHO05D007069 1.7e-07 58.9 58 65.5
SHI37138 Sapria himalayana HOM05D006320 ORTHO05D007069 1.7e-07 58.9 63 60.3
Sopen12g013690 Solanum pennellii HOM05D006320 ORTHO05D007069 1.7e-07 58.9 74 56.8
GSVIVG01029662001 Vitis vinifera HOM05D006320 ORTHO05D007069 1.7e-07 58.9 70 57.1
SHI38465 Sapria himalayana HOM05D000743 ORTHO05D000580 2.2e-07 58.5 103 46.6
SHI52535 Sapria himalayana HOM05D006320 ORTHO05D007069 2.2e-07 58.5 63 60.3
PGSC0003DMG400002202 Solanum tuberosum HOM05D006320 ORTHO05D007069 2.9e-07 58.2 67 61.2
SHI40933 Sapria himalayana HOM05D000743 ORTHO05D000580 3.8e-07 57.8 61 63.9
SHI49633 Sapria himalayana HOM05D006320 ORTHO05D007069 3.8e-07 57.8 63 58.7
SHI51203 Sapria himalayana HOM05D006320 ORTHO05D007069 6.5e-07 57.0 59 62.7
SHI34993 Sapria himalayana HOM05D006320 ORTHO05D007069 8.4e-07 56.6 62 59.7
SHI38101 Sapria himalayana HOM05D000743 ORTHO05D000580 1.4e-06 55.8 50 60.0
SHI47782 Sapria himalayana HOM05D006320 ORTHO05D007069 1.4e-06 55.8 59 61.0
SHI50287 Sapria himalayana HOM05D006320 ORTHO05D007069 1.4e-06 55.8 61 59.0
ATMG00040 Arabidopsis thaliana HOM05D010793 ORTHO05D011945 2.5e-06 55.1 48 62.5
CARHR282610 Cardamine hirsuta HOM05D010793 ORTHO05D011945 2.5e-06 55.1 48 62.5
Gorai.001G163400 Gossypium raimondii HOM05D001750 ORTHO05D001825 2.5e-06 55.1 46 65.2
SHI47632 Sapria himalayana HOM05D006320 ORTHO05D007069 2.5e-06 55.1 59 61.0
SHI39778 Sapria himalayana HOM05D006320 ORTHO05D007069 3.2e-06 54.7 62 59.7
CAN.G547.1 Capsicum annuum HOM05D006320 ORTHO05D007069 5.5e-06 53.9 65 60.0


User provided reference genes

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