Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0235871 Helianthus annuus HOM05D007307 ORTHO05D009190 2.1e-269 931.8 467 100.0
ECA246G2038 Erigeron canadensis HOM05D007307 ORTHO05D009190 4.5e-232 807.7 467 86.1
Lsat_1_v5_gn_5_8240 Lactuca sativa HOM05D007307 ORTHO05D009190 3.2e-230 801.6 467 84.8
QL05p036096 Quercus lobata HOM05D007307 ORTHO05D009190 8.6e-199 697.2 474 71.3
Lj5A80T58 Lonicera japonica HOM05D007307 ORTHO05D009190 1.6e-197 693.0 465 72.5
Nn2g12391 Nelumbo nucifera HOM05D007307 ORTHO05D009190 4.4e-195 684.9 467 71.9
MSTRG.11181 Avicennia marina HOM05D007307 ORTHO05D009190 2.0e-192 676.0 467 70.9
TAR625G0746 Trochodendron aralioides HOM05D007307 ORTHO05D009190 2.0e-192 676.0 469 71.0
RcHm_v2.0_Chr2g0132981 Rosa chinensis HOM05D007307 ORTHO05D009190 6.0e-192 674.5 467 70.0
FAN14G3907 Fragaria x ananassa HOM05D007307 ORTHO05D009190 2.3e-191 672.5 467 69.2
FvH4_6g28640 Fragaria vesca HOM05D007307 ORTHO05D009190 5.0e-191 671.4 467 69.2
Cpa.g.sc10.77 Carica papaya HOM05D007307 ORTHO05D009190 8.6e-191 670.6 467 70.0
Migut.I00693 Erythranthe guttata HOM05D007307 ORTHO05D009190 1.9e-190 669.5 466 70.8
Nitab4.5_0002568g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 5.6e-190 667.9 465 69.7
FAN09G0915 Fragaria x ananassa HOM05D007307 ORTHO05D009190 9.5e-190 667.2 467 69.0
MD17G1223300 Malus domestica HOM05D007307 ORTHO05D009190 9.5e-190 667.2 465 70.1
Cc04_g05100 Coffea canephora HOM05D007307 ORTHO05D009190 2.1e-189 666.0 467 68.3
Manes.04G102400 Manihot esculenta HOM05D007307 ORTHO05D009190 3.6e-189 665.2 468 70.1
Sopen03g035800 Solanum pennellii HOM05D007307 ORTHO05D009190 4.7e-189 664.8 464 70.0
FAN05G4298 Fragaria x ananassa HOM05D007307 ORTHO05D009190 1.1e-188 663.7 467 68.3
Solyc03g116870.3 Solanum lycopersicum HOM05D007307 ORTHO05D009190 2.3e-188 662.5 464 69.6
PGSC0003DMG400019823 Solanum tuberosum HOM05D007307 ORTHO05D009190 3.1e-188 662.1 464 69.6
Peaxi162Scf00332g00525 Petunia axillaris HOM05D007307 ORTHO05D009190 4.0e-188 661.8 466 68.9
Actinidia25480 Actinidia chinensis HOM05D007307 ORTHO05D009190 5.2e-188 661.4 468 70.3
CSS0015248 Camellia sinensis var. sinensis HOM05D007307 ORTHO05D009190 5.2e-188 661.4 459 71.0
Haze_16668 Corylus avellana HOM05D007307 ORTHO05D009190 6.8e-188 661.0 480 69.0
GSVIVG01015957001 Vitis vinifera HOM05D007307 ORTHO05D009190 1.5e-187 659.8 471 68.8
CiPaw.02G162300 Carya illinoinensis HOM05D007307 ORTHO05D009190 2.0e-187 659.4 471 68.8
Nitab4.5_0012161g0020 Nicotiana tabacum HOM05D007307 ORTHO05D009190 2.0e-187 659.4 465 69.2
Prupe.3G098200 Prunus persica HOM05D007307 ORTHO05D009190 2.0e-187 659.4 470 70.0
Eucgr.F03957 Eucalyptus grandis HOM05D007307 ORTHO05D009190 4.4e-187 658.3 474 69.0
CDE04G0143 Ceratophyllum demersum HOM05D007307 ORTHO05D009190 2.9e-186 655.6 469 69.1
Thecc.06G041700 Theobroma cacao HOM05D007307 ORTHO05D009190 2.9e-186 655.6 469 69.5
Aa31LG7G560 Aethionema arabicum HOM05D007307 ORTHO05D009190 3.7e-186 655.2 467 70.7
Atru.chr10.2412 Acer truncatum HOM05D007307 ORTHO05D009190 4.9e-186 654.8 470 69.8
Gorai.009G123800 Gossypium raimondii HOM05D007307 ORTHO05D009190 6.4e-186 654.4 471 69.2
Ciclev10025544m.g Citrus clementina HOM05D007307 ORTHO05D009190 1.9e-185 652.9 468 67.9
Gohir.D05G120300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 4.1e-185 651.7 471 69.0
CAN.G407.66 Capsicum annuum HOM05D007307 ORTHO05D009190 7.1e-185 651.0 465 69.9
Duzib192G1050 Durio zibethinus HOM05D007307 ORTHO05D009190 1.6e-184 649.8 467 69.8
Ca_20542_v3 Cicer arietinum L. HOM05D007307 ORTHO05D009190 2.7e-184 649.0 421 73.2
TPR.G23084 Trifolium pratense HOM05D007307 ORTHO05D009190 2.7e-184 649.0 472 68.4
ClCG09G003340 Citrullus lanatus HOM05D007307 ORTHO05D009190 7.8e-184 647.5 473 67.2
THA.LOC104813590 Tarenaya hassleriana HOM05D007307 ORTHO05D009190 1.0e-183 647.1 467 69.4
SalBow7G3293 Salvia bowleyana HOM05D007307 ORTHO05D009190 1.3e-183 646.7 464 69.4
AUR62026998 Chenopodium quinoa HOM05D007307 ORTHO05D009190 1.5e-182 643.3 465 68.4
Potri.001G044300 Populus trichocarpa HOM05D007307 ORTHO05D009190 1.9e-182 642.9 470 68.3
Medtr4g007080 Medicago truncatula HOM05D007307 ORTHO05D009190 1.6e-181 639.8 465 67.3
Sed0012177 Sechium edule HOM05D007307 ORTHO05D009190 2.8e-181 639.0 469 68.0
PSO170G4955 Papaver somniferum HOM05D007307 ORTHO05D009190 4.7e-181 638.3 471 67.1
AUR62030838 Chenopodium quinoa HOM05D007307 ORTHO05D009190 6.2e-181 637.9 465 67.5
CsaV3_7G031890 Cucumis sativus L. HOM05D007307 ORTHO05D009190 6.2e-181 637.9 469 67.0
Glyma.07G023000 Glycine max HOM05D007307 ORTHO05D009190 1.4e-180 636.7 476 65.8
Glyma.08G218800 Glycine max HOM05D007307 ORTHO05D009190 5.2e-180 634.8 463 67.4
PSO017G5597 Papaver somniferum HOM05D007307 ORTHO05D009190 6.8e-180 634.4 471 66.7
Thhalv10007586m.g Eutrema salsugineum HOM05D007307 ORTHO05D009190 8.9e-180 634.0 462 69.7
AT1G15980 Arabidopsis thaliana HOM05D007307 ORTHO05D009190 2.0e-179 632.9 463 68.3
MELO3C023468.2 Cucumis melo HOM05D007307 ORTHO05D009190 2.0e-179 632.9 469 66.5
Rhsim08G0205700 Rhododendron simsii HOM05D007307 ORTHO05D009190 3.4e-179 632.1 488 67.2
BcaB02g06649 Brassica carinata HOM05D007307 ORTHO05D009190 4.4e-179 631.7 470 67.4
Carub.0001s1578 Capsella rubella HOM05D007307 ORTHO05D009190 4.4e-179 631.7 464 68.5
Psat7g260240 Pisum sativum HOM05D007307 ORTHO05D009190 1.3e-178 630.2 468 66.5
A06p12000 Brassica napus HOM05D007307 ORTHO05D009190 1.7e-178 629.8 468 67.9
BraA06t24371Z Brassica rapa HOM05D007307 ORTHO05D009190 1.7e-178 629.8 468 67.9
Aqoxy7G01916 Aquilegia oxysepala HOM05D007307 ORTHO05D009190 2.9e-178 629.0 466 67.4
BcaC05g25617 Brassica carinata HOM05D007307 ORTHO05D009190 4.9e-178 628.2 468 66.9
EL10Ac3g06300 Beta vulgaris HOM05D007307 ORTHO05D009190 8.3e-178 627.5 458 67.5
TWI18G0485 Tripterygium wilfordii HOM05D007307 ORTHO05D009190 8.3e-178 627.5 465 65.8
AL1G28140 Arabidopsis lyrata HOM05D007307 ORTHO05D009190 1.1e-177 627.1 468 67.5
Sp1g14290 Schrenkiella parvula HOM05D007307 ORTHO05D009190 1.4e-177 626.7 468 67.9
C05p14190 Brassica napus HOM05D007307 ORTHO05D009190 4.1e-177 625.2 468 66.7
CARHR016480 Cardamine hirsuta HOM05D007307 ORTHO05D009190 6.0e-176 621.3 468 68.2
Lj3g0010338 Lotus japonicus HOM05D007307 ORTHO05D009190 1.0e-175 620.5 413 70.0
Hma1.2p1_0109F.1_g052560 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 6.6e-175 617.8 470 66.6
Phvul.010G161300 Phaseolus vulgaris HOM05D007307 ORTHO05D009190 6.6e-175 617.8 458 66.4
VMungo0331G1235 Vigna mungo HOM05D007307 ORTHO05D009190 1.1e-174 617.1 458 65.9
Sabra01G0030600 Salix brachista HOM05D007307 ORTHO05D009190 1.5e-174 616.7 511 62.0
Oeu051583.2 Olea europaea HOM05D007307 ORTHO05D009190 2.5e-174 615.9 396 73.7
unitig_52.g17476 Utricularia gibba HOM05D007307 ORTHO05D009190 4.3e-174 615.1 458 66.6
CANSAT56G3714 Cannabis sativa HOM05D007307 ORTHO05D009190 5.6e-174 614.8 489 61.3
ATR0739G128 Amborella trichopoda HOM05D007307 ORTHO05D009190 3.6e-173 612.1 467 64.5
Dinv23284 Davidia involucrata HOM05D007307 ORTHO05D009190 1.6e-168 596.7 386 73.6
DCAR_017649 Daucus carota HOM05D007307 ORTHO05D009190 1.0e-167 594.0 411 72.3
Lalb_Chr25g0278871 Lupinus albus HOM05D007307 ORTHO05D009190 2.3e-167 592.8 460 64.3
FAN02G3759 Fragaria x ananassa HOM05D007307 ORTHO05D009190 8.7e-167 590.9 407 69.0
arahy.Tifrunner.gnm1.ann1.X6E8D2 Arachis hypogaea HOM05D007307 ORTHO05D009190 2.8e-165 585.9 467 61.7
Zm00001eb176730 Zea mays HOM05D007307 ORTHO05D009190 2.1e-157 559.7 413 65.4
Os08g0276100 Oryza sativa ssp. japonica HOM05D007307 ORTHO05D009190 4.0e-156 555.4 471 59.4
Zm00001eb412420 Zea mays HOM05D007307 ORTHO05D009190 2.1e-152 543.1 413 63.7
Gohir.A05G119300 Gossypium hirsutum HOM05D007307 ORTHO05D009190 6.7e-151 538.1 389 68.6
arahy.Tifrunner.gnm1.ann1.DFM3I4 Arachis hypogaea HOM05D007307 ORTHO05D009190 1.8e-135 486.9 467 54.6
COL.COLO4_26702 Corchorus olitorius HOM05D007307 ORTHO05D009190 1.6e-133 480.3 324 71.9
BolC5t30150H Brassica oleracea HOM05D007307 ORTHO05D009190 6.5e-130 468.4 348 66.1
Ah.01g006960 Amaranthus hybridus HOM05D007307 ORTHO05D009190 2.8e-125 453.0 457 54.3
SMO364G0491 Selaginella moellendorffii HOM05D007307 ORTHO05D009190 5.7e-118 428.7 400 53.8
AagrBONN_evm.TU.Sc2ySwM_344.2748 Anthoceros agrestis HOM05D007307 ORTHO05D009190 2.2e-117 426.8 400 55.5
Pp3c15_23280 Physcomitrium patens HOM05D007307 ORTHO05D009190 1.7e-114 417.2 451 49.7
Pp3c9_19250 Physcomitrium patens HOM05D007307 ORTHO05D009190 1.7e-114 417.2 449 49.9
Mapoly0114s0017 Marchantia polymorpha HOM05D007307 ORTHO05D009190 2.7e-112 409.8 405 52.1
CBR_g34729 Chara braunii HOM05D007307 ORTHO05D009190 6.3e-93 345.5 415 45.3
Hma1.2p1_0109F.1_g052570 Hydrangea macrophylla HOM05D007307 ORTHO05D009190 9.5e-73 278.5 206 67.5
SEGI_02712 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 1.6e-64 251.1 206 59.2
SEGI_37660 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 1.6e-64 251.1 206 59.2
Hund06518 Selenicereus undatus HOM05D007307 ORTHO05D009190 7.8e-59 232.3 187 61.5
SEGI_25940 Sequoiadendron giganteum HOM05D007307 ORTHO05D009190 3.0e-50 203.8 144 64.6
Actinidia18248 Actinidia chinensis HOM05D007307 ORTHO05D009190 2.3e-26 124.4 87 70.1
Lj5A80T54 Lonicera japonica HOM05D007307 ORTHO05D009190 6.7e-18 96.3 61 70.5


User provided reference genes

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