Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0235661 Helianthus annuus HOM05D004279 ORTHO05D004979 3.9e-84 314.7 153 100.0
HanXRQChr05g0156561 Helianthus annuus HOM05D004279 ORTHO05D004979 3.7e-58 228.4 131 85.5
Lsat_1_v5_gn_5_7280 Lactuca sativa HOM05D004279 ORTHO05D004979 3.7e-58 228.4 133 83.5
ECA236G3281 Erigeron canadensis HOM05D004279 ORTHO05D004979 1.7e-55 219.5 128 82.0
HanXRQChr13g0386401 Helianthus annuus HOM05D004279 ORTHO05D004979 3.8e-55 218.4 131 80.9
Lj1A851T62 Lonicera japonica HOM05D004279 ORTHO05D004979 8.5e-55 217.2 131 80.2
DCAR_009977 Daucus carota HOM05D004279 ORTHO05D004979 1.4e-52 209.9 131 77.9
Hma1.2p1_1274F.1_g271930 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 1.8e-52 209.5 126 80.2
Hma1.2p1_1143F.1_g261130 Hydrangea macrophylla HOM05D004279 ORTHO05D004979 2.3e-52 209.1 126 79.4
Dinv22371 Davidia involucrata HOM05D004279 ORTHO05D004979 3.0e-52 208.8 131 78.6
MSTRG.12925 Avicennia marina HOM05D004279 ORTHO05D004979 8.8e-52 207.2 131 77.1
Cc05_g12550 Coffea canephora HOM05D004279 ORTHO05D004979 8.8e-52 207.2 131 77.1
TPR.G38955 Trifolium pratense HOM05D004279 ORTHO05D004979 8.8e-52 207.2 128 78.9
CSS0001500 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.2e-51 206.8 133 78.9
MSTRG.14375 Avicennia marina HOM05D004279 ORTHO05D004979 2.0e-51 206.1 131 77.9
Lj3g0025503 Lotus japonicus HOM05D004279 ORTHO05D004979 2.0e-51 206.1 128 78.1
Actinidia35269 Actinidia chinensis HOM05D004279 ORTHO05D004979 2.6e-51 205.7 131 78.6
Prupe.4G187700 Prunus persica HOM05D004279 ORTHO05D004979 2.6e-51 205.7 126 78.6
Ca_01814_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 4.4e-51 204.9 128 77.3
Ca_30536_v3 Cicer arietinum L. HOM05D004279 ORTHO05D004979 4.4e-51 204.9 128 77.3
Migut.H01911 Erythranthe guttata HOM05D004279 ORTHO05D004979 4.4e-51 204.9 131 76.3
TWI38G1973 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 4.4e-51 204.9 128 76.6
CANSAT11G2237 Cannabis sativa HOM05D004279 ORTHO05D004979 5.7e-51 204.5 128 78.1
MD03G1221800 Malus domestica HOM05D004279 ORTHO05D004979 5.7e-51 204.5 126 77.8
Rhsim04G0018800 Rhododendron simsii HOM05D004279 ORTHO05D004979 5.7e-51 204.5 131 77.1
Medtr2g080130 Medicago truncatula HOM05D004279 ORTHO05D004979 7.5e-51 204.1 128 78.1
Phvul.005G085300 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 7.5e-51 204.1 128 77.3
VMungo1080G0833 Vigna mungo HOM05D004279 ORTHO05D004979 7.5e-51 204.1 128 77.3
Nitab4.5_0009177g0010 Nicotiana tabacum HOM05D004279 ORTHO05D004979 9.8e-51 203.8 131 75.6
SalBow7G1458 Salvia bowleyana HOM05D004279 ORTHO05D004979 9.8e-51 203.8 126 77.8
TWI39G0076 Tripterygium wilfordii HOM05D004279 ORTHO05D004979 9.8e-51 203.8 127 77.2
Gohir.A04G027700 Gossypium hirsutum HOM05D004279 ORTHO05D004979 1.3e-50 203.4 126 77.0
Gohir.D05G360400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 1.3e-50 203.4 126 77.0
Gorai.009G432300 Gossypium raimondii HOM05D004279 ORTHO05D004979 1.3e-50 203.4 126 77.0
Solyc07g063460.3 Solanum lycopersicum HOM05D004279 ORTHO05D004979 1.3e-50 203.4 131 73.3
Sopen07g031640 Solanum pennellii HOM05D004279 ORTHO05D004979 1.3e-50 203.4 131 73.3
Eucgr.F01088 Eucalyptus grandis HOM05D004279 ORTHO05D004979 1.7e-50 203.0 128 75.8
Gohir.A01G067200 Gossypium hirsutum HOM05D004279 ORTHO05D004979 2.2e-50 202.6 126 77.0
Gohir.D01G054400 Gossypium hirsutum HOM05D004279 ORTHO05D004979 2.2e-50 202.6 126 77.0
Gorai.002G074300 Gossypium raimondii HOM05D004279 ORTHO05D004979 2.2e-50 202.6 126 77.0
Psat4g016400 Pisum sativum HOM05D004279 ORTHO05D004979 2.2e-50 202.6 128 77.3
COL.COLO4_09461 Corchorus olitorius HOM05D004279 ORTHO05D004979 2.8e-50 202.2 126 76.2
Nitab4.5_0000815g0050 Nicotiana tabacum HOM05D004279 ORTHO05D004979 2.8e-50 202.2 131 75.6
Glyma.12G220600 Glycine max HOM05D004279 ORTHO05D004979 3.7e-50 201.8 128 76.6
DCAR_022481 Daucus carota HOM05D004279 ORTHO05D004979 4.8e-50 201.4 131 73.3
TAR624G0257 Trochodendron aralioides HOM05D004279 ORTHO05D004979 4.8e-50 201.4 129 76.0
Cpa.g.sc80.101 Carica papaya HOM05D004279 ORTHO05D004979 6.3e-50 201.1 128 74.2
PGSC0003DMG400019253 Solanum tuberosum HOM05D004279 ORTHO05D004979 6.3e-50 201.1 131 72.5
Ciclev10009067m.g Citrus clementina HOM05D004279 ORTHO05D004979 1.1e-49 200.3 128 75.0
Duzib268G0928 Durio zibethinus HOM05D004279 ORTHO05D004979 1.1e-49 200.3 128 75.0
Eucgr.F03342 Eucalyptus grandis HOM05D004279 ORTHO05D004979 1.4e-49 199.9 128 74.2
BcaB05g22132 Brassica carinata HOM05D004279 ORTHO05D004979 2.4e-49 199.1 128 73.4
Potri.011G128300 Populus trichocarpa HOM05D004279 ORTHO05D004979 2.4e-49 199.1 126 75.4
Duzib213G0014 Durio zibethinus HOM05D004279 ORTHO05D004979 3.1e-49 198.7 126 75.4
MD11G1239200 Malus domestica HOM05D004279 ORTHO05D004979 3.1e-49 198.7 126 75.4
Peaxi162Scf01111g00012 Petunia axillaris HOM05D004279 ORTHO05D004979 4.1e-49 198.4 131 74.8
Potri.001G405200 Populus trichocarpa HOM05D004279 ORTHO05D004979 4.1e-49 198.4 126 75.4
THA.LOC104799915 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 4.1e-49 198.4 127 75.6
A02p10310 Brassica napus HOM05D004279 ORTHO05D004979 5.4e-49 198.0 128 72.7
BraA02t06098Z Brassica rapa HOM05D004279 ORTHO05D004979 5.4e-49 198.0 128 72.7
Oeu055672.1 Olea europaea HOM05D004279 ORTHO05D004979 7.0e-49 197.6 131 73.3
PGR031G2155 Punica granatum HOM05D004279 ORTHO05D004979 7.0e-49 197.6 128 73.4
Sabra16G0266200 Salix brachista HOM05D004279 ORTHO05D004979 7.0e-49 197.6 128 74.2
Sp6g16410 Schrenkiella parvula HOM05D004279 ORTHO05D004979 7.0e-49 197.6 126 73.8
AL8G29740 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 9.1e-49 197.2 126 73.8
CARHR267680 Cardamine hirsuta HOM05D004279 ORTHO05D004979 9.1e-49 197.2 126 73.0
FAN16G2997 Fragaria x ananassa HOM05D004279 ORTHO05D004979 9.1e-49 197.2 126 76.2
Nn1g03957 Nelumbo nucifera HOM05D004279 ORTHO05D004979 9.1e-49 197.2 126 75.4
TAR626G0357 Trochodendron aralioides HOM05D004279 ORTHO05D004979 9.1e-49 197.2 129 72.9
Aqoxy4G01310 Aquilegia oxysepala HOM05D004279 ORTHO05D004979 1.2e-48 196.8 129 72.1
AT5G54400 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 1.2e-48 196.8 126 73.0
BcaC03g14314 Brassica carinata HOM05D004279 ORTHO05D004979 1.2e-48 196.8 128 71.9
BolC2t07801H Brassica oleracea HOM05D004279 ORTHO05D004979 1.2e-48 196.8 128 71.9
FvH4_3g20760 Fragaria vesca HOM05D004279 ORTHO05D004979 1.2e-48 196.8 126 76.2
FAN11G1457 Fragaria x ananassa HOM05D004279 ORTHO05D004979 1.2e-48 196.8 126 76.2
Nn1g06689 Nelumbo nucifera HOM05D004279 ORTHO05D004979 1.2e-48 196.8 137 70.1
Oeu008023.1 Olea europaea HOM05D004279 ORTHO05D004979 1.2e-48 196.8 131 72.5
QL08p019074 Quercus lobata HOM05D004279 ORTHO05D004979 1.6e-48 196.4 126 74.6
RcHm_v2.0_Chr5g0034991 Rosa chinensis HOM05D004279 ORTHO05D004979 1.6e-48 196.4 126 76.2
CSS0025917 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 2.7e-48 195.7 127 76.4
Cfa020528 Carpinus fangiana HOM05D004279 ORTHO05D004979 2.7e-48 195.7 127 75.6
Haze_09505 Corylus avellana HOM05D004279 ORTHO05D004979 2.7e-48 195.7 127 75.6
Sed0000911 Sechium edule HOM05D004279 ORTHO05D004979 2.7e-48 195.7 128 75.0
FAN21G3274 Fragaria x ananassa HOM05D004279 ORTHO05D004979 3.5e-48 195.3 126 75.4
Aa31LG8G2770 Aethionema arabicum HOM05D004279 ORTHO05D004979 4.5e-48 194.9 126 74.6
BraA05t22210Z Brassica rapa HOM05D004279 ORTHO05D004979 4.5e-48 194.9 126 73.8
Thecc.07G074500 Theobroma cacao HOM05D004279 ORTHO05D004979 4.5e-48 194.9 126 73.8
C02p17040 Brassica napus HOM05D004279 ORTHO05D004979 5.9e-48 194.5 128 71.1
FAN25G2565 Fragaria x ananassa HOM05D004279 ORTHO05D004979 5.9e-48 194.5 126 75.4
Manes.03G114800 Manihot esculenta HOM05D004279 ORTHO05D004979 5.9e-48 194.5 126 73.8
Sc16g0006820 Simmondsia chinensis HOM05D004279 ORTHO05D004979 5.9e-48 194.5 131 73.3
Carub.0008s1473 Capsella rubella HOM05D004279 ORTHO05D004979 7.7e-48 194.1 126 73.0
Atru.chr2.2812 Acer truncatum HOM05D004279 ORTHO05D004979 1.0e-47 193.7 126 73.8
THA.LOC104810491 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 1.0e-47 193.7 126 73.8
BcaC09g48518 Brassica carinata HOM05D004279 ORTHO05D004979 1.3e-47 193.4 126 73.8
BolC1t04855H Brassica oleracea HOM05D004279 ORTHO05D004979 1.3e-47 193.4 126 73.8
ClCG11G018340 Citrullus lanatus HOM05D004279 ORTHO05D004979 2.2e-47 192.6 128 73.4
MELO3C018223.2 Cucumis melo HOM05D004279 ORTHO05D004979 2.2e-47 192.6 128 73.4
CsaV3_3G044480 Cucumis sativus L. HOM05D004279 ORTHO05D004979 2.2e-47 192.6 128 73.4
Sed0021920 Sechium edule HOM05D004279 ORTHO05D004979 2.2e-47 192.6 128 73.4
AT3G15530 Arabidopsis thaliana HOM05D004279 ORTHO05D004979 3.8e-47 191.8 126 73.0
BcaB04g20920 Brassica carinata HOM05D004279 ORTHO05D004979 3.8e-47 191.8 126 73.0
Carub.0003s1526 Capsella rubella HOM05D004279 ORTHO05D004979 3.8e-47 191.8 126 73.0
CARHR090590 Cardamine hirsuta HOM05D004279 ORTHO05D004979 3.8e-47 191.8 126 73.0
Thhalv10021257m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 3.8e-47 191.8 126 73.0
Sp3g13790 Schrenkiella parvula HOM05D004279 ORTHO05D004979 3.8e-47 191.8 126 73.0
Aa31LG3G10340 Aethionema arabicum HOM05D004279 ORTHO05D004979 8.5e-47 190.7 128 71.1
BcaB06g29588 Brassica carinata HOM05D004279 ORTHO05D004979 8.5e-47 190.7 126 72.2
BcaC05g28964 Brassica carinata HOM05D004279 ORTHO05D004979 8.5e-47 190.7 126 72.2
A05p33880 Brassica napus HOM05D004279 ORTHO05D004979 8.5e-47 190.7 126 72.2
C05p51590 Brassica napus HOM05D004279 ORTHO05D004979 8.5e-47 190.7 126 72.2
BolC5t33846H Brassica oleracea HOM05D004279 ORTHO05D004979 8.5e-47 190.7 126 72.2
AL3G28110 Arabidopsis lyrata HOM05D004279 ORTHO05D004979 1.5e-46 189.9 126 72.2
THA.LOC104818054 Tarenaya hassleriana HOM05D004279 ORTHO05D004979 1.5e-46 189.9 126 73.8
Lsat_1_v5_gn_7_105700 Lactuca sativa HOM05D004279 ORTHO05D004979 1.9e-46 189.5 121 78.5
Lalb_Chr01g0016991 Lupinus albus HOM05D004279 ORTHO05D004979 5.5e-46 188.0 127 74.8
Manes.15G084500 Manihot esculenta HOM05D004279 ORTHO05D004979 5.5e-46 188.0 128 71.1
CiPaw.11G174600 Carya illinoinensis HOM05D004279 ORTHO05D004979 7.2e-46 187.6 127 73.2
Dinv08329 Davidia involucrata HOM05D004279 ORTHO05D004979 9.4e-46 187.2 115 79.1
SGA_v2.0_scaffold9G04950 Striga asiatica HOM05D004279 ORTHO05D004979 9.4e-46 187.2 132 68.9
Actinidia18754 Actinidia chinensis HOM05D002936 ORTHO05D004979 2.7e-45 185.7 120 76.7
SGA_v2.0_scaffold73G24305 Striga asiatica HOM05D004279 ORTHO05D004979 6.1e-45 184.5 125 69.6
CiPaw.12G122100 Carya illinoinensis HOM05D004279 ORTHO05D004979 8.0e-45 184.1 126 72.2
PSO210G3340 Papaver somniferum HOM05D004279 ORTHO05D004979 8.0e-45 184.1 130 70.8
PSO832G3402 Papaver somniferum HOM05D004279 ORTHO05D004979 8.0e-45 184.1 130 70.8
MBI02_g29384_MAGBIO Magnolia biondii HOM05D004279 ORTHO05D004979 1.8e-44 183.0 126 72.2
A01p38550 Brassica napus HOM05D004279 ORTHO05D004979 1.5e-43 179.9 120 72.5
C01p48920 Brassica napus HOM05D004279 ORTHO05D004979 1.5e-43 179.9 120 72.5
BraA01t03905Z Brassica rapa HOM05D004279 ORTHO05D004979 2.0e-43 179.5 120 72.5
Glyma.12G148500 Glycine max HOM05D004279 ORTHO05D004979 2.6e-43 179.1 126 72.2
Phvul.011G148200 Phaseolus vulgaris HOM05D004279 ORTHO05D004979 3.4e-43 178.7 126 72.2
unitig_0.g2258 Utricularia gibba HOM05D004279 ORTHO05D004979 5.7e-43 177.9 128 66.4
Glyma.06G249400 Glycine max HOM05D004279 ORTHO05D004979 3.7e-42 175.3 126 69.8
Lalb_Chr25g0286631 Lupinus albus HOM05D004279 ORTHO05D004979 1.4e-41 173.3 128 71.1
SHI28037 Sapria himalayana HOM05D004279 ORTHO05D004979 5.4e-41 171.4 126 65.9
VMungo1127G1925 Vigna mungo HOM05D004279 ORTHO05D004979 1.2e-40 170.2 126 67.5
CSS0022309 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.6e-40 169.9 131 69.5
CSS0045555 Camellia sinensis var. sinensis HOM05D004279 ORTHO05D004979 1.6e-40 169.9 118 72.9
AUR62029338 Chenopodium quinoa HOM05D004279 ORTHO05D004979 3.3e-38 162.2 138 63.0
Ah.06g183670 Amaranthus hybridus HOM05D004279 ORTHO05D004979 7.3e-38 161.0 139 61.9
AUR62015623 Chenopodium quinoa HOM05D004279 ORTHO05D004979 9.5e-38 160.6 138 62.3
SHI18877 Sapria himalayana HOM05D004279 ORTHO05D004979 1.2e-37 160.2 123 64.2
SHI27891 Sapria himalayana HOM05D004279 ORTHO05D004979 2.8e-37 159.1 126 62.7
EL10Ac4g08091 Beta vulgaris HOM05D004279 ORTHO05D004979 1.8e-36 156.4 142 57.7
SHI28023 Sapria himalayana HOM05D004279 ORTHO05D004979 9.8e-35 150.6 126 60.3
ECA246G0789 Erigeron canadensis HOM05D004279 ORTHO05D004979 4.1e-33 145.2 83 79.5
HPP92_016704 Vanilla planifolia HOM05D004279 ORTHO05D004979 9.2e-33 144.1 126 61.9
Glyma.13G280900 Glycine max HOM05D004279 ORTHO05D004979 2.3e-28 129.4 128 55.5
Mapoly0019s0089 Marchantia polymorpha HOM05D004279 ORTHO05D004979 1.1e-25 120.6 109 53.2
SHI27994 Sapria himalayana HOM05D004279 ORTHO05D004979 1.5e-22 110.2 123 49.6
SHI27902 Sapria himalayana HOM05D004279 ORTHO05D004979 5.6e-22 108.2 126 48.4
ATR0693G409 Amborella trichopoda HOM05D004279 ORTHO05D004979 8.1e-21 104.4 113 54.0
CBR_g24389 Chara braunii HOM05D004279 ORTHO05D004979 6.4e-18 94.7 114 43.0
VMungo1127G2040 Vigna mungo HOM05D004279 ORTHO05D004979 2.1e-16 89.7 71 60.6
Thhalv10014468m.g Eutrema salsugineum HOM05D004279 ORTHO05D004979 3.9e-15 85.5 71 63.4
SHI28022 Sapria himalayana HOM05D004279 ORTHO05D004979 2.6e-11 72.8 73 52.1
GSVIVG01014410001 Vitis vinifera HOM05D004279 ORTHO05D004979 7.8e-08 61.2 31 87.1


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