Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0234551 Helianthus annuus HOM05D007911 ORTHO05D009536 5.8e-237 823.9 449 100.0
ECA247G2582 Erigeron canadensis HOM05D007911 ORTHO05D009536 1.3e-66 258.1 449 42.3
Lsat_1_v5_gn_9_31060 Lactuca sativa HOM05D007911 ORTHO05D009536 1.3e-50 204.9 440 39.1
Potri.006G046700 Populus trichocarpa HOM05D007911 ORTHO05D009536 1.3e-18 98.6 296 29.4
Sabra06G0032200 Salix brachista HOM05D007911 ORTHO05D009536 1.3e-18 98.6 216 32.9
Potri.016G043300 Populus trichocarpa HOM05D007911 ORTHO05D009536 3.2e-17 94.0 308 28.9
Hma1.2p1_0005F.1_g004500 Hydrangea macrophylla HOM05D007911 ORTHO05D009536 2.1e-16 91.3 202 35.6
Nitab4.5_0000826g0230 Nicotiana tabacum HOM05D017238 ORTHO05D009536 2.7e-16 90.9 241 31.5
Sopen04g008390 Solanum pennellii HOM05D017238 ORTHO05D009536 1.0e-15 89.0 239 30.5
QL07p003623 Quercus lobata HOM05D007911 ORTHO05D009536 1.3e-15 88.6 207 33.8
COL.COLO4_33204 Corchorus olitorius HOM05D007911 ORTHO05D009536 3.9e-15 87.0 173 39.9
Actinidia39204 Actinidia chinensis HOM05D007911 ORTHO05D009536 5.1e-15 86.7 115 46.1
Nitab4.5_0001618g0290 Nicotiana tabacum HOM05D017238 ORTHO05D009536 5.1e-15 86.7 144 37.5
Peaxi162Scf00130g00827 Petunia axillaris HOM05D017238 ORTHO05D009536 1.5e-14 85.1 116 43.1
Actinidia09304 Actinidia chinensis HOM05D007911 ORTHO05D009536 3.3e-14 84.0 115 46.1
CSS0030068 Camellia sinensis var. sinensis HOM05D007911 ORTHO05D009536 3.3e-14 84.0 116 46.6
Solyc04g016290.3 Solanum lycopersicum HOM05D017238 ORTHO05D009536 9.6e-14 82.4 298 26.8
CAN.G676.9 Capsicum annuum HOM05D017238 ORTHO05D009536 2.1e-13 81.3 116 44.0
vmacro21970 Vaccinium macrocarpon HOM05D007911 ORTHO05D009536 2.1e-13 81.3 136 38.2
Haze_19798 Corylus avellana HOM05D007911 ORTHO05D009536 2.8e-13 80.9 113 45.1
Thecc.05G151800 Theobroma cacao HOM05D007911 ORTHO05D009536 2.8e-13 80.9 153 38.6
Prupe.7G054000 Prunus persica HOM05D007911 ORTHO05D009536 4.8e-13 80.1 191 35.1
Gorai.002G146100 Gossypium raimondii HOM05D007911 ORTHO05D009536 8.1e-13 79.3 191 34.0
Duzib106G0073 Durio zibethinus HOM05D007911 ORTHO05D009536 2.4e-12 77.8 143 35.0
Duzib093G1996 Durio zibethinus HOM05D007911 ORTHO05D009536 3.1e-12 77.4 259 29.3
Gohir.D01G119650 Gossypium hirsutum HOM05D007911 ORTHO05D009536 1.5e-11 75.1 190 33.2
Rhsim03G0028700 Rhododendron simsii HOM05D007911 ORTHO05D009536 1.5e-11 75.1 143 37.1
Atru.chr12.1999 Acer truncatum HOM05D007911 ORTHO05D009536 3.4e-11 73.9 258 27.9
RcHm_v2.0_Chr3g0483481 Rosa chinensis HOM05D020102 ORTHO05D009536 3.4e-11 73.9 192 32.3
Cfa016782 Carpinus fangiana HOM05D007911 ORTHO05D009536 7.6e-11 72.8 252 30.6
Gohir.A01G130811 Gossypium hirsutum HOM05D007911 ORTHO05D009536 7.6e-11 72.8 193 33.2
TAR636G2018 Trochodendron aralioides HOM05D007911 ORTHO05D009536 1.0e-10 72.4 208 33.7
TWI53G0905 Tripterygium wilfordii HOM05D007911 ORTHO05D009536 1.3e-10 72.0 236 30.5
TWI77G0280 Tripterygium wilfordii HOM05D007911 ORTHO05D009536 1.3e-10 72.0 167 36.5
Eucgr.A02312 Eucalyptus grandis HOM05D007911 ORTHO05D009536 1.7e-10 71.6 177 32.2
arahy.Tifrunner.gnm1.ann1.BL1IZ1 Arachis hypogaea HOM05D007911 ORTHO05D009536 3.8e-10 70.5 144 35.4
Manes.08G052400 Manihot esculenta HOM05D007911 ORTHO05D009536 3.8e-10 70.5 135 37.8
Cpa.g.sc1210.2 Carica papaya HOM05D007911 ORTHO05D009536 6.5e-10 69.7 185 31.4
arahy.Tifrunner.gnm1.ann1.18RKPD Arachis hypogaea HOM05D007911 ORTHO05D009536 8.4e-10 69.3 172 32.0
Oeu035501.1 Olea europaea HOM05D007911 ORTHO05D009536 1.9e-09 68.2 139 35.3
Glyma.03G133900 Glycine max HOM05D007911 ORTHO05D009536 5.5e-09 66.6 113 39.8
Atru.chr1.1239 Acer truncatum HOM05D007911 ORTHO05D009536 9.3e-09 65.9 111 38.7
PGR004G0024 Punica granatum HOM05D007911 ORTHO05D009536 1.2e-08 65.5 151 35.8
arahy.Tifrunner.gnm1.ann1.XA9LH2 Arachis hypogaea HOM05D007911 ORTHO05D009536 1.6e-08 65.1 114 36.8
CiPaw.09G040100 Carya illinoinensis HOM05D007911 ORTHO05D009536 2.1e-08 64.7 113 38.1
CANSAT80G1261 Cannabis sativa HOM05D007911 ORTHO05D009536 2.7e-08 64.3 187 32.6
Lj1g0009156 Lotus japonicus HOM05D007911 ORTHO05D009536 3.5e-08 63.9 106 38.7
TPR.G18258 Trifolium pratense HOM05D007911 ORTHO05D009536 3.5e-08 63.9 107 40.2
CANSAT80G2434 Cannabis sativa HOM05D007911 ORTHO05D009536 4.6e-08 63.5 197 32.0
Glyma.19G136200 Glycine max HOM05D007911 ORTHO05D009536 6.0e-08 63.2 168 32.1
Ca_08429_v3 Cicer arietinum L. HOM05D007911 ORTHO05D009536 1.0e-07 62.4 101 38.6
MSTRG.6410 Avicennia marina HOM05D007911 ORTHO05D009536 1.8e-07 61.6 185 30.8
Ciclev10006879m.g Citrus clementina HOM05D007911 ORTHO05D009536 2.3e-07 61.2 119 37.8
Medtr7g091040 Medicago truncatula HOM05D007911 ORTHO05D009536 3.0e-07 60.8 132 31.1
SalBow6G0990 Salvia bowleyana HOM05D007911 ORTHO05D009536 3.0e-07 60.8 188 27.7
VMungo1383G2470 Vigna mungo HOM05D007911 ORTHO05D009536 3.0e-07 60.8 280 27.5
SalBow6G1456 Salvia bowleyana HOM05D007911 ORTHO05D009536 3.9e-07 60.5 188 27.7
Psat3g074440 Pisum sativum HOM05D007911 ORTHO05D009536 8.7e-07 59.3 99 38.4
Lalb_Chr25g0287291 Lupinus albus HOM05D007911 ORTHO05D009536 1.1e-06 58.9 111 37.8
Phvul.001G129400 Phaseolus vulgaris HOM05D007911 ORTHO05D009536 1.1e-06 58.9 279 27.2
Nn2g15134 Nelumbo nucifera HOM05D007911 ORTHO05D009536 1.9e-06 58.2 223 26.0
Cc06_g17980 Coffea canephora HOM05D007911 ORTHO05D009536 9.6e-06 55.8 104 33.7
VMungo0720G0307 Vigna mungo HOM05D007911 ORTHO05D009536 9.6e-06 55.8 106 39.6


User provided reference genes

Program Settings