Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0231431 Helianthus annuus HOM05D004226 ORTHO05D004842 1.2e-83 313.2 165 100.0
Lsat_1_v5_gn_8_98041 Lactuca sativa HOM05D004226 ORTHO05D004842 3.4e-65 251.9 172 80.8
Dinv28812 Davidia involucrata HOM05D004226 ORTHO05D004842 2.0e-57 226.1 168 75.0
HanXRQChr16g0507911 Helianthus annuus HOM05D004226 ORTHO05D004842 4.9e-56 221.5 174 69.5
ECA236G1737 Erigeron canadensis HOM05D004226 ORTHO05D004842 1.4e-55 219.9 179 72.1
HanXRQChr09g0257641 Helianthus annuus HOM05D004226 ORTHO05D004842 1.2e-54 216.9 169 70.4
Actinidia23795 Actinidia chinensis HOM05D004226 ORTHO05D004842 1.7e-53 213.0 167 68.3
Glyma.18G152900 Glycine max HOM05D004226 ORTHO05D004842 4.3e-52 208.4 163 68.1
Dinv10439 Davidia involucrata HOM05D004226 ORTHO05D004842 1.2e-51 206.8 167 69.5
Lj2A1117T18 Lonicera japonica HOM05D004226 ORTHO05D004842 2.8e-51 205.7 167 71.3
vmacro02815 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 2.8e-51 205.7 167 67.1
Duzib138G1045 Durio zibethinus HOM05D004226 ORTHO05D004842 3.6e-51 205.3 162 67.3
Phvul.008G136900 Phaseolus vulgaris HOM05D004226 ORTHO05D004842 4.7e-51 204.9 163 67.5
Gohir.A11G142500 Gossypium hirsutum HOM05D004226 ORTHO05D004842 3.1e-50 202.2 162 66.0
Gohir.D11G148800 Gossypium hirsutum HOM05D004226 ORTHO05D004842 4.0e-50 201.8 162 66.0
Gorai.007G159600 Gossypium raimondii HOM05D004226 ORTHO05D004842 4.0e-50 201.8 162 66.0
Eucgr.H00726 Eucalyptus grandis HOM05D004226 ORTHO05D004842 6.8e-50 201.1 160 64.4
Lalb_Chr01g0021991 Lupinus albus HOM05D004226 ORTHO05D004842 1.2e-49 200.3 167 63.5
Duzib133G0243 Durio zibethinus HOM05D004226 ORTHO05D004842 2.0e-49 199.5 162 66.0
ECA247G2547 Erigeron canadensis HOM05D004226 ORTHO05D004842 3.4e-49 198.7 167 67.1
TAR365G1191 Trochodendron aralioides HOM05D004226 ORTHO05D004842 3.4e-49 198.7 161 65.8
VMungo1383G2422 Vigna mungo HOM05D004226 ORTHO05D004842 3.4e-49 198.7 163 66.9
Lalb_Chr03g0041091 Lupinus albus HOM05D004226 ORTHO05D004842 4.4e-49 198.4 164 64.0
Haze_03501 Corylus avellana HOM05D004226 ORTHO05D004842 9.8e-49 197.2 169 62.7
Rhsim13G0052600 Rhododendron simsii HOM05D004226 ORTHO05D004842 1.3e-48 196.8 160 66.2
Actinidia30018 Actinidia chinensis HOM05D004226 ORTHO05D004842 3.7e-48 195.3 167 64.1
Migut.N00664 Erythranthe guttata HOM05D004226 ORTHO05D004842 8.3e-48 194.1 161 65.8
Cfa010569 Carpinus fangiana HOM05D004226 ORTHO05D004842 1.4e-47 193.4 169 62.1
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla HOM05D004226 ORTHO05D004842 1.9e-47 193.0 179 64.8
DCAR_012646 Daucus carota HOM05D004226 ORTHO05D004842 4.1e-47 191.8 164 65.9
MSTRG.18494 Avicennia marina HOM05D004226 ORTHO05D004842 5.4e-47 191.4 161 65.8
Nitab4.5_0009151g0020 Nicotiana tabacum HOM05D004226 ORTHO05D004842 7.1e-47 191.0 157 68.2
CiPaw.13G055300 Carya illinoinensis HOM05D004226 ORTHO05D004842 2.7e-46 189.1 150 65.3
Nitab4.5_0000038g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 6.0e-46 188.0 157 67.5
TAR362G0792 Trochodendron aralioides HOM05D004226 ORTHO05D004842 7.8e-46 187.6 165 62.4
Glyma.08G344200 Glycine max HOM05D004226 ORTHO05D004842 3.0e-45 185.7 165 61.2
DCAR_018624 Daucus carota HOM05D004226 ORTHO05D004842 3.9e-45 185.3 165 64.8
Oeu003656.1 Olea europaea HOM05D004226 ORTHO05D004842 3.9e-45 185.3 165 60.6
Actinidia34543 Actinidia chinensis HOM05D004226 ORTHO05D004842 6.6e-45 184.5 167 62.9
CSS0019192 Camellia sinensis var. sinensis HOM05D004226 ORTHO05D004842 8.6e-45 184.1 130 74.6
PGR083G1064 Punica granatum HOM05D004226 ORTHO05D004842 1.1e-44 183.7 162 63.0
Nn1g08255 Nelumbo nucifera HOM05D004226 ORTHO05D004842 4.3e-44 181.8 179 54.7
Cc01_g16140 Coffea canephora HOM05D004226 ORTHO05D004842 5.6e-44 181.4 171 63.7
CANSAT01G0104 Cannabis sativa HOM05D004226 ORTHO05D004842 2.1e-43 179.5 160 61.9
Manes.12G054100 Manihot esculenta HOM05D004226 ORTHO05D004842 2.8e-43 179.1 152 63.2
Peaxi162Scf00372g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 8.1e-43 177.6 160 60.6
QL09p046251 Quercus lobata HOM05D004226 ORTHO05D004842 1.8e-42 176.4 151 64.9
Hund02794 Selenicereus undatus HOM05D004226 ORTHO05D004842 1.8e-42 176.4 163 63.2
MSTRG.21303 Avicennia marina HOM05D004226 ORTHO05D004842 2.3e-42 176.0 169 58.0
Thecc.01G211100 Theobroma cacao HOM05D004226 ORTHO05D004842 2.3e-42 176.0 162 59.3
Lj1g0015941 Lotus japonicus HOM05D004226 ORTHO05D004842 5.2e-42 174.9 167 60.5
TWI36G1598 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 2.6e-41 172.6 155 60.0
TAR633G1997 Trochodendron aralioides HOM05D004226 ORTHO05D004842 2.6e-41 172.6 161 60.2
Aqoxy2G03959 Aquilegia oxysepala HOM05D004226 ORTHO05D004842 3.4e-41 172.2 167 58.1
Cpa.g.sc8.73 Carica papaya HOM05D004226 ORTHO05D004842 3.4e-41 172.2 162 58.6
SGA_v2.0_scaffold8G04494 Striga asiatica HOM05D004226 ORTHO05D004842 3.4e-41 172.2 168 60.1
Potri.002G251200 Populus trichocarpa HOM05D004226 ORTHO05D004842 4.4e-41 171.8 160 61.2
TWI18G1341 Tripterygium wilfordii HOM05D004226 ORTHO05D004842 9.9e-41 170.6 158 58.9
vmacro14692 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 1.7e-40 169.9 162 59.9
Ciclev10016998m.g Citrus clementina HOM05D004226 ORTHO05D004842 6.4e-40 167.9 165 56.4
EL10Ac5g10626 Beta vulgaris HOM05D004226 ORTHO05D004842 8.4e-40 167.5 161 60.2
Medtr7g052690 Medicago truncatula HOM05D004226 ORTHO05D004842 1.4e-39 166.8 162 59.9
TPR.G26804 Trifolium pratense HOM05D004226 ORTHO05D004842 1.4e-39 166.8 162 59.9
Rhsim01G0248500 Rhododendron simsii HOM05D004226 ORTHO05D004842 7.1e-39 164.5 162 58.6
Psat3g151000 Pisum sativum HOM05D004226 ORTHO05D004842 9.2e-39 164.1 163 58.9
COL.COLO4_26572 Corchorus olitorius HOM05D004226 ORTHO05D004842 1.6e-38 163.3 162 55.6
SGA_v2.0_scaffold624G53238 Striga asiatica HOM05D004226 ORTHO05D004842 2.7e-38 162.5 165 57.6
Oeu057834.2 Olea europaea HOM05D000039 ORTHO05D005440 4.6e-38 161.8 156 57.7
Nitab4.5_0002167g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 1.0e-37 160.6 156 59.0
Ah.11g051030 Amaranthus hybridus HOM05D004226 ORTHO05D004842 3.0e-37 159.1 166 57.8
Nitab4.5_0002311g0050 Nicotiana tabacum HOM05D004226 ORTHO05D004842 5.1e-37 158.3 156 57.1
THA.LOC104802646 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 5.1e-37 158.3 167 55.1
DCAR_004767 Daucus carota HOM05D004226 ORTHO05D004842 1.1e-36 157.1 157 58.6
Hund09468 Selenicereus undatus HOM05D004226 ORTHO05D004842 1.1e-36 157.1 173 55.5
SGA_v2.0_scaffold29G12070 Striga asiatica HOM05D004226 ORTHO05D004842 1.9e-36 156.4 188 52.1
ClCG05G015470 Citrullus lanatus HOM05D004226 ORTHO05D004842 9.6e-36 154.1 163 54.6
Sabra02G0191000 Salix brachista HOM05D004226 ORTHO05D004842 9.6e-36 154.1 189 49.2
AUR62028700 Chenopodium quinoa HOM05D004226 ORTHO05D004842 2.8e-35 152.5 167 58.1
Gohir.D07G094900 Gossypium hirsutum HOM05D004226 ORTHO05D004842 6.2e-35 151.4 152 56.6
Sopen11g003480 Solanum pennellii HOM05D004226 ORTHO05D004842 1.8e-34 149.8 163 52.1
HPP92_024259 Vanilla planifolia HOM05D004226 ORTHO05D004842 2.4e-34 149.4 164 51.2
Gohir.A07G090200 Gossypium hirsutum HOM05D004226 ORTHO05D004842 3.1e-34 149.1 152 55.9
Gorai.001G102200 Gossypium raimondii HOM05D004226 ORTHO05D004842 3.1e-34 149.1 152 55.9
PSO017G4362 Papaver somniferum HOM05D004226 ORTHO05D004842 4.0e-34 148.7 173 50.3
AUR62008122 Chenopodium quinoa HOM05D004226 ORTHO05D004842 6.9e-34 147.9 165 55.8
PGSC0003DMG400027348 Solanum tuberosum HOM05D004226 ORTHO05D004842 6.9e-34 147.9 163 52.8
PSO675G4654 Papaver somniferum HOM05D004226 ORTHO05D004842 8.9e-34 147.5 156 51.3
Sc17g0001670 Simmondsia chinensis HOM05D004226 ORTHO05D004842 1.2e-33 147.1 154 52.6
Sopen06g002500 Solanum pennellii HOM05D004226 ORTHO05D004842 2.6e-33 146.0 163 51.5
Migut.D00735 Erythranthe guttata HOM05D004226 ORTHO05D004842 4.4e-33 145.2 161 51.6
PGSC0003DMG400020653 Solanum tuberosum HOM05D004226 ORTHO05D004842 4.4e-33 145.2 163 52.8
Migut.D00732 Erythranthe guttata HOM05D004226 ORTHO05D004842 5.8e-33 144.8 162 52.5
Solyc06g007610.2 Solanum lycopersicum HOM05D004226 ORTHO05D004842 2.2e-32 142.9 163 50.9
MELO3C003732.2 Cucumis melo HOM05D004226 ORTHO05D004842 6.4e-32 141.4 156 51.3
THA.LOC104822467 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 8.4e-32 141.0 165 50.3
Aa31sc186G10 Aethionema arabicum HOM05D004226 ORTHO05D004842 4.2e-31 138.7 149 55.0
CsaV3_3G046080 Cucumis sativus L. HOM05D004226 ORTHO05D004842 5.4e-31 138.3 156 50.6
Sp2g18850 Schrenkiella parvula HOM05D004226 ORTHO05D004842 9.3e-31 137.5 160 51.9
Duzib168G0485 Durio zibethinus HOM05D004226 ORTHO05D004842 1.7e-29 133.3 145 54.5
CAN.G181.39 Capsicum annuum HOM05D004226 ORTHO05D004842 2.3e-29 132.9 145 52.4
Thhalv10005050m.g Eutrema salsugineum HOM05D004226 ORTHO05D004842 2.3e-29 132.9 154 53.9
BcaC06g30793 Brassica carinata HOM05D004226 ORTHO05D004842 3.0e-29 132.5 154 51.9
BcaC03g17654 Brassica carinata HOM05D004226 ORTHO05D004842 3.9e-29 132.1 148 52.0
BolC2t11714H Brassica oleracea HOM05D004226 ORTHO05D004842 5.1e-29 131.7 143 53.1
C02p56560 Brassica napus HOM05D004226 ORTHO05D004842 8.7e-29 131.0 143 53.1
THA.LOC104818997 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 1.1e-28 130.6 164 49.4
BolC7t44438H Brassica oleracea HOM05D004226 ORTHO05D004842 1.5e-28 130.2 154 52.6
A09p04540 Brassica napus HOM05D004226 ORTHO05D004842 5.6e-28 128.3 155 52.3
C09p04850 Brassica napus HOM05D004226 ORTHO05D004842 5.6e-28 128.3 158 51.9
BraA09t36089Z Brassica rapa HOM05D004226 ORTHO05D004842 5.6e-28 128.3 155 52.3
A06p39150 Brassica napus HOM05D004226 ORTHO05D004842 7.3e-28 127.9 154 53.2
BraA06t26830Z Brassica rapa HOM05D004226 ORTHO05D004842 1.6e-27 126.7 154 52.6
CDE05G1161 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 2.8e-27 125.9 148 49.3
ATR0686G035 Amborella trichopoda HOM05D004226 ORTHO05D004842 3.6e-27 125.6 159 49.1
C07p39180 Brassica napus HOM05D004226 ORTHO05D004842 3.6e-27 125.6 156 51.9
Lj3g0009756 Lotus japonicus HOM05D004226 ORTHO05D004842 4.8e-27 125.2 140 51.4
Sed0006210 Sechium edule HOM05D004226 ORTHO05D004842 4.8e-27 125.2 159 48.4
Lj3g0001126 Lotus japonicus HOM05D004226 ORTHO05D004842 1.8e-26 123.2 141 49.6
A02p37490 Brassica napus HOM05D004226 ORTHO05D004842 2.4e-26 122.9 155 50.3
BcaC04g23773 Brassica carinata HOM05D004226 ORTHO05D004842 3.1e-26 122.5 159 50.3
BolC9t53412H Brassica oleracea HOM05D004226 ORTHO05D004842 3.1e-26 122.5 159 50.3
BraA02t08736Z Brassica rapa HOM05D004226 ORTHO05D004842 4.0e-26 122.1 150 50.0
Atru.chr6.3547 Acer truncatum HOM05D004226 ORTHO05D004842 3.4e-25 119.0 128 50.0
Duzib138G0271 Durio zibethinus HOM05D004226 ORTHO05D004842 3.4e-25 119.0 142 49.3
SEGI_00481 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 3.4e-25 119.0 163 46.0
Prupe.8G190400 Prunus persica HOM05D004226 ORTHO05D004842 4.5e-25 118.6 162 48.1
Duzib211G0475 Durio zibethinus HOM05D004226 ORTHO05D004842 2.2e-24 116.3 142 49.3
Ca_07469_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 8.4e-24 114.4 86 67.4
Ca_30573_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 8.4e-24 114.4 86 67.4
Carub.0008s0806 Capsella rubella HOM05D004226 ORTHO05D004842 1.1e-23 114.0 146 49.3
Duzib205G0826 Durio zibethinus HOM05D004226 ORTHO05D004842 1.4e-23 113.6 156 45.5
AT5G48480 Arabidopsis thaliana HOM05D004226 ORTHO05D004842 1.9e-23 113.2 147 47.6
Duzib170G0075 Durio zibethinus HOM05D004226 ORTHO05D004842 1.9e-23 113.2 142 51.4
SHI10249 Sapria himalayana HOM05D004226 ORTHO05D004842 1.0e-21 107.5 141 45.4
Mapoly0001s0501 Marchantia polymorpha HOM05D004226 ORTHO05D004842 8.7e-21 104.4 157 39.5
AL8G21330 Arabidopsis lyrata HOM05D004226 ORTHO05D004842 1.1e-20 104.0 147 44.9
CARHR183600 Cardamine hirsuta HOM05D004226 ORTHO05D004842 1.1e-20 104.0 160 44.4
CDE05G0628 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 2.5e-20 102.8 114 54.4
BcaB07g30025 Brassica carinata HOM05D004226 ORTHO05D004842 3.3e-20 102.4 151 46.4
SMO146G0354 Selaginella moellendorffii HOM05D004226 ORTHO05D004842 7.4e-20 101.3 133 42.9
Duzib147G0221 Durio zibethinus HOM05D004226 ORTHO05D004842 1.6e-19 100.1 127 49.6
Lj2P1154T27 Lonicera japonica HOM05D004226 ORTHO05D004842 4.8e-19 98.6 78 70.5
Cfa011865 Carpinus fangiana HOM05D004226 ORTHO05D004842 3.1e-18 95.9 92 56.5
MD10G1152100 Malus domestica HOM05D004226 ORTHO05D004842 6.9e-18 94.7 162 42.6
FvH4_2g17810 Fragaria vesca HOM05D004226 ORTHO05D004842 2.2e-16 89.7 127 48.0
FAN24G0678 Fragaria x ananassa HOM05D004226 ORTHO05D004842 2.2e-16 89.7 127 47.2
RcHm_v2.0_Chr6g0282841 Rosa chinensis HOM05D004226 ORTHO05D004842 4.9e-16 88.6 127 47.2
FAN27G2858 Fragaria x ananassa HOM05D004226 ORTHO05D004842 8.4e-16 87.8 127 46.5
FAN27G3147 Fragaria x ananassa HOM05D004226 ORTHO05D004842 8.4e-16 87.8 127 46.5
FAN15G3314 Fragaria x ananassa HOM05D004226 ORTHO05D004842 1.1e-15 87.4 127 46.5
MD05G1159600 Malus domestica HOM05D004226 ORTHO05D004842 1.1e-15 87.4 170 38.2
SGA_v2.0_scaffold85G26613 Striga asiatica HOM05D005727 ORTHO05D007324 1.2e-14 84.0 91 50.5
BcaB07g30020 Brassica carinata HOM05D004226 ORTHO05D004842 6.0e-14 81.6 106 47.2
Psat0s337g0040 Pisum sativum HOM05D004226 ORTHO05D004842 6.0e-14 81.6 95 51.6
unitig_0.g1219 Utricularia gibba HOM05D004226 ORTHO05D004842 1.5e-12 77.0 76 52.6
Sc19g0005500 Simmondsia chinensis HOM05D004226 ORTHO05D004842 1.6e-11 73.6 77 50.6
Glyma.14G148600 Glycine max HOM05D004226 ORTHO05D004842 3.7e-11 72.4 68 58.8
Pp3c13_5750 Physcomitrium patens HOM05D004226 ORTHO05D004842 8.1e-11 71.2 141 31.9
BcaC06g31007 Brassica carinata HOM05D004226 ORTHO05D004842 4.0e-10 68.9 152 35.5
Medtr8g011510 Medicago truncatula HOM05D004226 ORTHO05D004842 3.4e-09 65.9 129 38.0
Peaxi162Scf00585g01023 Petunia axillaris HOM05D004226 ORTHO05D004842 1.0e-08 64.3 56 58.9
SEGI_39221 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 4.2e-07 58.9 74 45.9
DCAR_023429 Daucus carota HOM05D057861 ORTHO05D004842 1.6e-06 57.0 140 32.1
Peaxi162Scf00462g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 2.1e-06 56.6 54 55.6
Rhsim06G0095600 Rhododendron simsii HOM05D003225 ORTHO05D338509 4.6e-06 55.5 65 50.8
Nn4g25974 Nelumbo nucifera HOM05D066638 ORTHO05D004842 6.0e-06 55.1 59 50.8


User provided reference genes

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