Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0230891 Helianthus annuus HOM05D004791 ORTHO05D005637 9.2e-110 400.2 198 100.0
HanXRQChr08g0230941 Helianthus annuus HOM05D004791 ORTHO05D005637 1.2e-85 320.1 278 65.5
HanXRQChr08g0230971 Helianthus annuus HOM05D004791 ORTHO05D005637 6.5e-39 164.9 194 52.6
ECA247G3547 Erigeron canadensis HOM05D004791 ORTHO05D005637 7.2e-30 134.8 204 40.7
Lsat_1_v5_gn_5_176000 Lactuca sativa HOM05D004791 ORTHO05D005637 3.0e-28 129.4 185 41.6
Lsat_1_v5_gn_9_15660 Lactuca sativa HOM05D004791 ORTHO05D005637 8.8e-28 127.9 219 37.9
HanXRQChr08g0230961 Helianthus annuus HOM05D004791 ORTHO05D005637 1.1e-27 127.5 75 82.7
COL.COLO4_18343 Corchorus olitorius HOM05D004791 ORTHO05D005637 1.7e-26 123.6 163 43.6
Peaxi162Scf00390g00128 Petunia axillaris HOM05D004791 ORTHO05D005637 2.2e-26 123.2 185 39.5
DCAR_018598 Daucus carota HOM05D004791 ORTHO05D005637 6.3e-26 121.7 219 36.1
HanXRQChr01g0013701 Helianthus annuus HOM05D004791 ORTHO05D005637 8.2e-26 121.3 185 38.9
Nitab4.5_0008751g0050 Nicotiana tabacum HOM05D004791 ORTHO05D005637 8.2e-26 121.3 206 36.4
SGA_v2.0_scaffold8G04482 Striga asiatica HOM05D004791 ORTHO05D005637 4.1e-25 119.0 198 36.9
PGSC0003DMG400027664 Solanum tuberosum HOM05D004791 ORTHO05D005637 5.3e-25 118.6 185 37.3
Thhalv10002092m.g Eutrema salsugineum HOM05D004791 ORTHO05D005637 9.1e-25 117.9 186 37.6
Nitab4.5_0001348g0240 Nicotiana tabacum HOM05D004791 ORTHO05D005637 9.1e-25 117.9 185 37.8
Migut.D00780 Erythranthe guttata HOM05D004791 ORTHO05D005637 1.2e-24 117.5 185 38.4
Sopen06g034170 Solanum pennellii HOM05D004791 ORTHO05D005637 1.2e-24 117.5 185 37.3
Solyc06g082810.3 Solanum lycopersicum HOM05D004791 ORTHO05D005637 1.6e-24 117.1 185 37.3
Nitab4.5_0004383g0040 Nicotiana tabacum HOM05D004791 ORTHO05D005637 2.0e-24 116.7 182 37.4
ECA248G0040 Erigeron canadensis HOM05D004791 ORTHO05D005637 2.7e-24 116.3 209 36.4
CSS0048046 Camellia sinensis var. sinensis HOM05D004791 ORTHO05D005637 3.5e-24 115.9 183 37.7
CSS0048448 Camellia sinensis var. sinensis HOM05D004791 ORTHO05D005637 3.5e-24 115.9 183 37.7
CiPaw.13G121900 Carya illinoinensis HOM05D004791 ORTHO05D005637 3.5e-24 115.9 251 33.5
Sc15g0007330 Simmondsia chinensis HOM05D004791 ORTHO05D005637 3.5e-24 115.9 181 37.6
Nitab4.5_0000539g0030 Nicotiana tabacum HOM05D004791 ORTHO05D005637 4.5e-24 115.5 185 37.3
GSVIVG01037421001 Vitis vinifera HOM05D004791 ORTHO05D005637 4.5e-24 115.5 222 34.7
CAN.G874.52 Capsicum annuum HOM05D004791 ORTHO05D005637 5.9e-24 115.2 185 36.2
Eucgr.B03774 Eucalyptus grandis HOM05D004791 ORTHO05D005637 5.9e-24 115.2 185 36.2
SGA_v2.0_scaffold158G37484 Striga asiatica HOM05D004791 ORTHO05D005637 5.9e-24 115.2 185 38.9
Cfa010279 Carpinus fangiana HOM05D004791 ORTHO05D005637 1.0e-23 114.4 220 34.1
LjContig00564g0026958 Lotus japonicus HOM05D004791 ORTHO05D005637 1.0e-23 114.4 185 38.9
MD02G1268200 Malus domestica HOM05D004791 ORTHO05D005637 1.0e-23 114.4 218 33.9
MD07G1051600 Malus domestica HOM05D004791 ORTHO05D005637 1.0e-23 114.4 212 36.3
Nitab4.5_0000105g0450 Nicotiana tabacum HOM05D004791 ORTHO05D005637 1.0e-23 114.4 203 35.0
ClCG02G024120 Citrullus lanatus HOM05D004791 ORTHO05D005637 1.7e-23 113.6 181 37.6
Migut.N00694 Erythranthe guttata HOM05D004791 ORTHO05D005637 1.7e-23 113.6 185 36.2
Potri.001G222300 Populus trichocarpa HOM05D004791 ORTHO05D005637 1.7e-23 113.6 216 35.6
Sp4g08380 Schrenkiella parvula HOM05D004791 ORTHO05D005637 1.7e-23 113.6 211 34.1
PGR102G1910 Punica granatum HOM05D004791 ORTHO05D005637 2.2e-23 113.2 185 37.3
THA.LOC104800478 Tarenaya hassleriana HOM05D004791 ORTHO05D005637 2.2e-23 113.2 185 37.3
MELO3C014695.2 Cucumis melo HOM05D004791 ORTHO05D005637 2.9e-23 112.8 181 37.6
Manes.05G196500 Manihot esculenta HOM05D004791 ORTHO05D005637 3.8e-23 112.5 185 37.3
SalBow6G3468 Salvia bowleyana HOM05D004791 ORTHO05D005637 3.8e-23 112.5 221 35.3
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 5.0e-23 112.1 182 37.4
CsaV3_4G023210 Cucumis sativus L. HOM05D004791 ORTHO05D005637 6.5e-23 111.7 181 37.0
Glyma.14G040400 Glycine max HOM05D004791 ORTHO05D005637 6.5e-23 111.7 186 37.1
Hma1.2p1_1631F.1_g294630 Hydrangea macrophylla HOM05D004791 ORTHO05D005637 6.5e-23 111.7 215 33.0
Lalb_Chr04g0249541 Lupinus albus HOM05D004791 ORTHO05D005637 6.5e-23 111.7 183 36.6
BcaC04g24019 Brassica carinata HOM05D004791 ORTHO05D005637 8.5e-23 111.3 185 37.3
CSS0026131 Camellia sinensis var. sinensis HOM05D004791 ORTHO05D005637 8.5e-23 111.3 248 31.0
Ca_06167_v3 Cicer arietinum L. HOM05D004791 ORTHO05D005637 8.5e-23 111.3 220 34.1
Ca_06184_v3 Cicer arietinum L. HOM05D004791 ORTHO05D005637 8.5e-23 111.3 220 34.1
Thecc.09G339600 Theobroma cacao HOM05D004791 ORTHO05D005637 8.5e-23 111.3 205 33.7
CANSAT54G2396 Cannabis sativa HOM05D004791 ORTHO05D005637 1.1e-22 110.9 127 46.5
Gohir.A08G000072 Gossypium hirsutum HOM05D004791 ORTHO05D005637 1.1e-22 110.9 204 34.8
Gorai.004G001600 Gossypium raimondii HOM05D004791 ORTHO05D005637 1.1e-22 110.9 204 34.8
Prupe.2G053500 Prunus persica HOM05D004791 ORTHO05D005637 1.1e-22 110.9 63 79.4
BolC9t53160H Brassica oleracea HOM05D004791 ORTHO05D005637 1.5e-22 110.5 187 36.9
Glyma.02G275700 Glycine max HOM05D004791 ORTHO05D005637 1.5e-22 110.5 97 55.7
CSS0033533 Camellia sinensis var. sinensis HOM05D004791 ORTHO05D005637 1.9e-22 110.2 248 30.6
Ciclev10016367m.g Citrus clementina HOM05D004791 ORTHO05D005637 1.9e-22 110.2 99 55.6
FAN16G2039 Fragaria x ananassa HOM05D004791 ORTHO05D005637 1.9e-22 110.2 179 38.0
Aa31LG5G8380 Aethionema arabicum HOM05D004791 ORTHO05D005637 2.5e-22 109.8 204 33.8
arahy.Tifrunner.gnm1.ann1.FGXA9Q Arachis hypogaea HOM05D004791 ORTHO05D005637 2.5e-22 109.8 187 36.4
Dinv28770 Davidia involucrata HOM05D004791 ORTHO05D005637 2.5e-22 109.8 201 34.3
Psat2g021120 Pisum sativum HOM05D004791 ORTHO05D005637 2.5e-22 109.8 66 72.7
FvH4_3g27591 Fragaria vesca HOM05D004791 ORTHO05D005637 3.2e-22 109.4 181 37.0
Gohir.D08G008400 Gossypium hirsutum HOM05D004791 ORTHO05D005637 3.2e-22 109.4 204 34.3
Lalb_Chr04g0249551 Lupinus albus HOM05D004791 ORTHO05D005637 3.2e-22 109.4 183 36.1
RcHm_v2.0_Chr5g0050091 Rosa chinensis HOM05D004791 ORTHO05D005637 3.2e-22 109.4 184 35.9
Sed0001715 Sechium edule HOM05D004791 ORTHO05D005637 3.2e-22 109.4 181 36.5
vmacro02852 Vaccinium macrocarpon HOM05D004791 ORTHO05D005637 3.2e-22 109.4 97 54.6
VMungo0647G0403 Vigna mungo HOM05D004791 ORTHO05D005637 3.2e-22 109.4 187 36.4
arahy.Tifrunner.gnm1.ann1.7GTL8A Arachis hypogaea HOM05D004791 ORTHO05D005637 4.2e-22 109.0 207 34.3
BcaB01g01998 Brassica carinata HOM05D004791 ORTHO05D005637 4.2e-22 109.0 185 35.7
BraA09t35872Z Brassica rapa HOM05D004791 ORTHO05D005637 4.2e-22 109.0 185 36.2
Hund25111 Selenicereus undatus HOM05D004791 ORTHO05D005637 5.5e-22 108.6 181 34.3
AL4G20260 Arabidopsis lyrata HOM05D004791 ORTHO05D005637 7.2e-22 108.2 205 34.6
C09p02320 Brassica napus HOM05D004791 ORTHO05D005637 7.2e-22 108.2 183 36.1
PSO732G0764 Papaver somniferum HOM05D004791 ORTHO05D005637 7.2e-22 108.2 189 33.9
Haze_23696 Corylus avellana HOM05D004791 ORTHO05D005637 9.4e-22 107.8 66 72.7
Duzib170G0202 Durio zibethinus HOM05D004791 ORTHO05D005637 9.4e-22 107.8 84 58.3
A09p02230 Brassica napus HOM05D004791 ORTHO05D005637 1.2e-21 107.5 185 35.7
Gohir.D13G235800 Gossypium hirsutum HOM05D004791 ORTHO05D005637 1.2e-21 107.5 185 36.2
Gorai.013G266500 Gossypium raimondii HOM05D004791 ORTHO05D005637 1.2e-21 107.5 185 36.2
TPR.G27619 Trifolium pratense HOM05D004791 ORTHO05D005637 1.2e-21 107.5 66 71.2
CARHR119150 Cardamine hirsuta HOM05D004791 ORTHO05D005637 1.6e-21 107.1 205 32.7
Gohir.A13G230300 Gossypium hirsutum HOM05D004791 ORTHO05D005637 1.6e-21 107.1 218 31.7
PSO675G0111 Papaver somniferum HOM05D004791 ORTHO05D005637 1.6e-21 107.1 193 33.2
Medtr5g088337 Medicago truncatula HOM05D004791 ORTHO05D005637 2.1e-21 106.7 185 35.1
TAR633G0334 Trochodendron aralioides HOM05D004791 ORTHO05D005637 2.1e-21 106.7 66 74.2
QL01p007413 Quercus lobata HOM05D004791 ORTHO05D005637 3.6e-21 105.9 94 53.2
ATR0661G342 Amborella trichopoda HOM05D004791 ORTHO05D005637 4.7e-21 105.5 109 49.5
Nn7g38012 Nelumbo nucifera HOM05D004791 ORTHO05D005637 4.7e-21 105.5 66 72.7
Phvul.008G205900 Phaseolus vulgaris HOM05D004791 ORTHO05D005637 4.7e-21 105.5 63 74.6
Carub.0004s0745 Capsella rubella HOM05D004791 ORTHO05D005637 6.1e-21 105.1 185 34.1
AUR62002934 Chenopodium quinoa HOM05D004791 ORTHO05D005637 6.1e-21 105.1 181 35.4
AUR62007743 Chenopodium quinoa HOM05D004791 ORTHO05D005637 6.1e-21 105.1 181 35.4
Sopen09g012370 Solanum pennellii HOM05D004791 ORTHO05D005637 6.1e-21 105.1 197 34.0
TWI79G1652 Tripterygium wilfordii HOM05D004791 ORTHO05D005637 8.0e-21 104.8 134 41.0
SEGI_38815 Sequoiadendron giganteum HOM05D004791 ORTHO05D005637 2.3e-20 103.2 133 41.4
THA.LOC104816959 Tarenaya hassleriana HOM05D004791 ORTHO05D005637 3.0e-20 102.8 66 68.2
MBI06_g07515_MAGBIO Magnolia biondii HOM05D004791 ORTHO05D005637 4.0e-20 102.4 66 66.7
vmacro14664 Vaccinium macrocarpon HOM05D004791 ORTHO05D005637 4.0e-20 102.4 203 33.0
CDE08G0165 Ceratophyllum demersum HOM05D004791 ORTHO05D005637 6.8e-20 101.7 179 34.6
Atru.chr3.2946 Acer truncatum HOM05D004791 ORTHO05D005637 8.8e-20 101.3 183 33.3
Aqoxy2G04139 Aquilegia oxysepala HOM05D004791 ORTHO05D005637 8.8e-20 101.3 164 36.0
Zm00001eb240820 Zea mays HOM05D004791 ORTHO05D005637 8.8e-20 101.3 184 33.7
CDE09G0384 Ceratophyllum demersum HOM05D004791 ORTHO05D005637 2.0e-19 100.1 116 44.8
Solyc09g018760.2 Solanum lycopersicum HOM05D004791 ORTHO05D005637 2.6e-19 99.8 96 50.0
Dinv00703 Davidia involucrata HOM05D004791 ORTHO05D005637 7.5e-19 98.2 65 64.6
Dinv18272 Davidia involucrata HOM05D004791 ORTHO05D005637 7.5e-19 98.2 65 64.6
AT2G26970 Arabidopsis thaliana HOM05D004791 ORTHO05D005637 1.3e-18 97.4 179 33.5
EL10Ac6g14521 Beta vulgaris HOM05D004791 ORTHO05D005637 1.7e-18 97.1 134 41.8
Mapoly0089s0044 Marchantia polymorpha HOM05D004791 ORTHO05D005637 2.2e-18 96.7 226 29.6
Os02g0465500 Oryza sativa ssp. japonica HOM05D004791 ORTHO05D005637 2.2e-18 96.7 185 32.4
Cc01_g15680 Coffea canephora HOM05D004791 ORTHO05D005637 2.8e-18 96.3 172 34.3
SEGI_08759 Sequoiadendron giganteum HOM05D004791 ORTHO05D005637 8.3e-18 94.7 203 31.5
Pp3c15_14440 Physcomitrium patens HOM05D004791 ORTHO05D005637 1.8e-17 93.6 65 60.0
SMO361G0388 Selaginella moellendorffii HOM05D004791 ORTHO05D005637 3.1e-17 92.8 81 55.6
FAN11G2354 Fragaria x ananassa HOM05D004791 ORTHO05D005637 9.1e-17 91.3 90 52.2
Prupe.2G051000 Prunus persica HOM05D004791 ORTHO05D005637 2.7e-16 89.7 167 34.1
Lj2A1108T30 Lonicera japonica HOM05D004791 ORTHO05D005637 3.5e-16 89.4 51 72.5
HPP92_004836 Vanilla planifolia HOM05D004791 ORTHO05D005637 1.0e-15 87.8 162 36.4
PRCOL_00004118 Prasinoderma coloniale HOM05D004791 ORTHO05D005637 1.9e-14 83.6 94 43.6
Cre10.g425800 Chlamydomonas reinhardtii HOM05D004791 ORTHO05D005637 5.5e-14 82.0 90 40.0
HPP92_004833 Vanilla planifolia HOM05D004791 ORTHO05D005637 8.0e-13 78.2 153 35.3
HanXRQChr08g0230951 Helianthus annuus HOM05D004791 ORTHO05D005637 1.8e-12 77.0 42 95.2
Rhsim11G0123600 Rhododendron simsii HOM05D004791 ORTHO05D005637 3.0e-12 76.3 175 34.9
Pp3c9_12520 Physcomitrium patens HOM05D004791 ORTHO05D005637 2.0e-11 73.6 65 47.7
Peaxi162Scf01280g00024 Petunia axillaris HOM05D004791 ORTHO05D005637 3.7e-10 69.3 56 62.5
Cfa021416 Carpinus fangiana HOM05D004791 ORTHO05D005637 2.0e-08 63.5 64 45.3
Gohir.D04G099150 Gossypium hirsutum HOM05D004791 ORTHO05D005637 1.0e-07 61.2 48 58.3
Gorai.013G056800 Gossypium raimondii HOM05D004791 ORTHO05D005637 1.0e-07 61.2 51 56.9
Os04g0303950 Oryza sativa ssp. japonica HOM05D004791 ORTHO05D005637 1.1e-06 57.8 39 66.7
Peaxi162Scf00293g00320 Petunia axillaris HOM05D004791 ORTHO05D005637 3.3e-06 56.2 146 28.1


User provided reference genes

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