Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 2.7e-146 521.9 252 100.0
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 5.3e-110 401.4 260 75.4
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 2.3e-89 332.8 261 60.9
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 3.1e-86 322.4 249 62.2
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 3.1e-86 322.4 249 62.2
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 2.0e-85 319.7 258 58.9
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 3.4e-85 318.9 257 61.9
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 4.9e-84 315.1 257 63.8
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 2.5e-83 312.8 258 59.7
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 1.6e-82 310.1 256 57.0
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 1.6e-82 310.1 257 56.8
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 2.7e-82 309.3 261 56.7
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 3.5e-82 308.9 259 59.1
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 1.3e-81 307.0 249 59.4
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 3.0e-81 305.8 252 59.9
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 6.7e-81 304.7 256 56.2
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 8.7e-81 304.3 258 56.2
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 1.1e-80 303.9 256 57.8
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 2.5e-80 302.8 260 57.3
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 3.3e-80 302.4 265 59.2
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 1.6e-79 300.1 261 59.0
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 1.6e-79 300.1 256 57.4
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 2.8e-79 299.3 257 58.0
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 5.3e-78 295.0 251 57.8
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 2.9e-76 289.3 250 58.4
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 3.8e-76 288.9 263 54.4
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 5.0e-76 288.5 256 56.2
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 2.5e-75 286.2 254 55.5
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 4.2e-75 285.4 256 55.1
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 7.2e-75 284.6 254 57.5
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 9.4e-75 284.3 252 55.2
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 1.6e-74 283.5 258 56.2
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 6.1e-74 281.6 254 56.3
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 7.9e-74 281.2 252 55.2
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 7.4e-72 274.6 254 55.1
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 9.7e-72 274.2 232 58.2
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 1.7e-71 273.5 256 53.5
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 2.8e-71 272.7 264 50.4
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 6.3e-71 271.6 255 53.3
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 4.1e-70 268.9 257 52.9
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 5.3e-70 268.5 257 51.8
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 6.9e-70 268.1 245 53.5
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 6.9e-70 268.1 254 53.5
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 2.0e-69 266.5 256 55.5
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 5.9e-69 265.0 270 51.1
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 2.9e-68 262.7 199 63.3
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 6.5e-68 261.5 225 60.0
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 1.4e-67 260.4 317 46.1
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 2.5e-67 259.6 263 50.6
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 3.2e-67 259.2 249 50.2
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 4.2e-67 258.8 252 52.0
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 5.5e-67 258.5 257 52.9
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 7.2e-67 258.1 255 50.2
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 1.6e-66 256.9 249 55.0
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 2.7e-66 256.1 243 50.6
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 5.1e-65 251.9 246 51.2
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 8.8e-65 251.1 256 50.0
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 2.0e-64 250.0 248 50.8
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 2.6e-64 249.6 249 51.0
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 2.6e-64 249.6 254 49.6
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 5.7e-64 248.4 364 37.4
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 1.3e-63 247.3 247 51.8
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 1.3e-63 247.3 244 48.8
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 1.7e-63 246.9 253 49.8
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 1.1e-62 244.2 256 46.5
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 1.4e-62 243.8 244 50.4
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 3.1e-62 242.7 187 61.0
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 5.3e-62 241.9 256 49.6
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 5.3e-62 241.9 256 49.6
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 5.3e-62 241.9 256 49.6
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 1.5e-61 240.4 194 62.4
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 2.0e-61 240.0 255 48.6
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 2.0e-61 240.0 260 48.1
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 1.1e-59 234.2 211 57.3
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 1.1e-59 234.2 257 51.4
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 3.2e-59 232.6 273 46.2
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 1.2e-58 230.7 240 46.2
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 2.7e-58 229.6 177 62.7
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 5.7e-56 221.9 237 47.3
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 2.6e-53 213.0 334 40.1
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 1.3e-52 210.7 255 46.3
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 2.5e-51 206.5 248 44.4
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 3.2e-51 206.1 162 56.8
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 3.0e-49 199.5 249 40.6
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 1.2e-48 197.6 199 52.8
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 8.3e-47 191.4 262 41.6
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 9.1e-46 188.0 236 45.3
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 7.7e-45 184.9 236 44.9
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 7.7e-45 184.9 139 61.2
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 2.5e-43 179.9 256 41.0
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 2.4e-38 163.3 235 37.9
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 3.6e-34 149.4 153 52.3
TPR.G38565 Trifolium pratense HOM05D007415 ORTHO05D009324 9.2e-30 134.8 244 36.1
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 2.0e-29 133.7 173 43.9
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 1.0e-28 131.3 108 62.0
Pp3c1_28310 Physcomitrium patens HOM05D007415 ORTHO05D009324 3.4e-24 116.3 203 34.0
Ah.11g050670 Amaranthus hybridus HOM05D007415 ORTHO05D009324 9.8e-24 114.8 220 35.5
Mapoly0134s0003 Marchantia polymorpha HOM05D007415 ORTHO05D009324 3.7e-23 112.8 245 32.2
AagrBONN_evm.TU.Sc2ySwM_362.2902 Anthoceros agrestis HOM05D007415 ORTHO05D009324 6.0e-21 105.5 160 36.9
SalBow2G2324 Salvia bowleyana HOM05D007415 ORTHO05D009324 6.0e-21 105.5 262 30.5
DCAR_017283 Daucus carota HOM05D007415 ORTHO05D009324 1.2e-18 97.8 132 40.2
SMO356G0522 Selaginella moellendorffii HOM05D007415 ORTHO05D009324 4.7e-18 95.9 239 31.8
PGSC0003DMG400007530 Solanum tuberosum HOM05D007415 ORTHO05D009324 4.1e-14 82.8 86 48.8


User provided reference genes

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