Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 1.6e-118 429.5 223 100.0
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 2.2e-83 312.8 228 78.5
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 3.4e-68 262.3 199 75.9
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 5.8e-52 208.4 210 58.6
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 2.9e-51 206.1 209 56.5
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 1.2e-49 200.7 175 61.7
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 2.7e-49 199.5 208 53.8
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 4.6e-49 198.7 185 60.0
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 4.6e-49 198.7 185 60.0
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 1.3e-48 197.2 205 55.1
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 2.3e-48 196.4 176 59.1
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 3.9e-48 195.7 205 58.0
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 8.6e-48 194.5 208 53.4
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 1.5e-47 193.7 221 51.6
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 1.5e-47 193.7 223 53.8
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 2.5e-47 193.0 223 54.7
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 5.6e-47 191.8 228 50.9
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 2.1e-46 189.9 182 58.8
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 2.1e-46 189.9 182 58.8
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 3.6e-46 189.1 229 52.0
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 6.2e-46 188.3 174 57.5
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 8.1e-46 188.0 206 57.8
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 8.1e-46 188.0 208 52.9
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 8.1e-46 188.0 128 73.4
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 4.0e-45 185.7 209 52.6
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 5.2e-45 185.3 182 56.6
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 8.9e-45 184.5 184 57.6
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 8.9e-45 184.5 208 53.4
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 1.2e-44 184.1 187 56.7
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 7.6e-44 181.4 209 53.6
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 1.3e-43 180.6 218 51.8
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 1.3e-43 180.6 218 52.8
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 1.7e-43 180.3 154 66.2
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.7e-43 180.3 185 56.8
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 2.9e-43 179.5 183 57.4
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 2.9e-43 179.5 116 73.3
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 3.8e-43 179.1 172 57.0
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 1.1e-42 177.6 208 51.9
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 1.4e-42 177.2 137 65.0
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 3.2e-42 176.0 192 55.2
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 4.1e-42 175.6 179 55.3
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 5.4e-42 175.3 179 55.9
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 1.2e-41 174.1 183 54.6
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 4.6e-41 172.2 118 69.5
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 4.6e-41 172.2 164 58.5
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 4.6e-41 172.2 170 60.6
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 6.0e-41 171.8 185 54.1
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 7.8e-41 171.4 118 69.5
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 1.0e-40 171.0 140 63.6
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 1.3e-40 170.6 118 69.5
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 1.3e-40 170.6 208 49.5
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 3.9e-40 169.1 117 69.2
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 3.9e-40 169.1 155 61.9
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 5.1e-40 168.7 172 56.4
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 8.6e-40 167.9 182 50.0
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 1.1e-39 167.5 174 50.6
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 1.1e-39 167.5 158 59.5
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 1.5e-39 167.2 219 48.9
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 1.5e-39 167.2 181 53.0
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 1.5e-39 167.2 110 70.0
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 1.5e-39 167.2 208 48.6
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 1.9e-39 166.8 184 54.3
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 3.3e-39 166.0 154 60.4
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 3.3e-39 166.0 213 48.8
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 3.3e-39 166.0 210 51.0
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 3.3e-39 166.0 147 64.6
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 4.3e-39 165.6 116 68.1
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 5.6e-39 165.2 112 68.8
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 5.6e-39 165.2 164 56.7
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 7.3e-39 164.9 205 47.3
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 9.6e-39 164.5 182 53.3
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 9.6e-39 164.5 209 46.4
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 9.6e-39 164.5 188 52.7
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 1.6e-38 163.7 215 49.8
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 2.8e-38 162.9 170 51.8
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 3.6e-38 162.5 162 54.3
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 8.1e-38 161.4 182 52.7
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 1.4e-37 160.6 184 51.6
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 1.4e-37 160.6 160 57.5
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 1.8e-37 160.2 110 68.2
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 1.8e-37 160.2 107 69.2
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 2.4e-37 159.8 179 49.2
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 5.2e-37 158.7 185 51.4
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 8.9e-37 157.9 160 58.1
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 8.9e-37 157.9 160 58.1
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 8.9e-37 157.9 106 69.8
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 8.9e-37 157.9 212 50.9
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 1.2e-36 157.5 160 57.5
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 1.2e-36 157.5 160 57.5
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 1.5e-36 157.1 119 68.1
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 2.0e-36 156.8 151 57.0
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 3.4e-36 156.0 160 57.5
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 4.4e-36 155.6 182 48.9
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 7.6e-36 154.8 118 66.9
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 6.4e-35 151.8 123 63.4
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 1.1e-34 151.0 179 50.3
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 1.4e-34 150.6 179 48.0
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 1.9e-34 150.2 159 49.1
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 9.3e-34 147.9 195 47.7
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 1.6e-33 147.1 106 59.4
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 2.7e-33 146.4 105 69.5
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 1.1e-31 141.0 88 77.3
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 2.5e-31 139.8 220 45.5
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 4.3e-31 139.0 163 44.2
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 2.1e-30 136.7 122 58.2
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 7.6e-28 128.3 125 50.4
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 3.8e-27 125.9 134 55.2
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 5.4e-26 122.1 152 50.7
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 1.8e-24 117.1 98 52.0
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 1.4e-21 107.5 175 47.4
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 6.9e-21 105.1 194 38.1
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 6.9e-21 105.1 110 45.5
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 8.7e-16 88.2 72 58.3
Ca_23571_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 4.3e-15 85.9 64 60.9
Gohir.D11G152300 Gossypium hirsutum HOM05D006993 ORTHO05D008336 8.4e-11 71.6 113 43.4
THA.LOC104815380 Tarenaya hassleriana HOM05D006993 ORTHO05D008336 4.8e-06 55.8 66 45.5


User provided reference genes

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