Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 1.2e-186 656.4 338 100.0
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 1.2e-125 453.8 343 71.7
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 5.2e-113 411.8 343 65.0
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 3.4e-112 409.1 278 77.3
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 3.7e-111 405.6 344 63.4
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 2.4e-110 402.9 344 63.7
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 9.2e-110 401.0 339 62.2
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 1.0e-108 397.5 342 63.2
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 1.5e-107 393.7 334 61.7
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 1.1e-105 387.5 370 58.4
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 2.3e-105 386.3 338 60.7
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 5.2e-105 385.2 344 60.5
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 6.8e-105 384.8 344 60.8
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 6.8e-105 384.8 333 61.0
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 2.0e-104 383.3 340 63.2
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 7.5e-104 381.3 344 60.5
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 8.3e-103 377.9 345 60.0
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 1.4e-102 377.1 346 59.8
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 7.1e-102 374.8 340 58.5
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 7.1e-102 374.8 332 62.7
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 2.1e-101 373.2 351 58.7
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 2.7e-101 372.9 340 61.2
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 3.5e-101 372.5 335 60.9
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 7.8e-101 371.3 334 62.0
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 1.3e-100 370.5 339 58.7
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 3.3e-99 365.9 340 58.2
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 4.3e-99 365.5 334 56.0
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 4.3e-99 365.5 344 57.3
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 6.2e-98 361.7 346 58.1
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 6.2e-98 361.7 346 55.8
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 5.2e-97 358.6 347 55.3
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 1.2e-96 357.5 344 57.6
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 3.4e-96 355.9 346 56.6
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 5.8e-96 355.1 343 56.3
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 1.3e-95 354.0 341 58.4
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 1.3e-95 354.0 345 58.8
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 4.9e-95 352.1 350 55.1
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 1.1e-94 350.9 333 57.7
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 1.4e-94 350.5 354 54.0
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 3.2e-94 349.4 333 57.7
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 5.4e-94 348.6 346 54.9
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 5.4e-94 348.6 350 55.4
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 7.1e-94 348.2 342 55.0
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 1.2e-93 347.4 340 56.5
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 2.7e-93 346.3 343 55.4
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 3.5e-93 345.9 344 54.7
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 4.6e-93 345.5 346 56.4
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 4.6e-93 345.5 346 55.5
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 1.3e-92 344.0 345 54.8
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 3.0e-92 342.8 341 56.0
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 3.0e-92 342.8 358 53.9
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 3.9e-92 342.4 340 54.7
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 1.4e-89 334.0 340 57.1
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 2.6e-88 329.7 356 52.8
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 3.4e-88 329.3 335 54.9
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 2.9e-87 326.2 333 55.0
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 3.8e-87 325.9 332 53.3
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 8.4e-87 324.7 342 54.4
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 1.1e-86 324.3 344 53.5
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 4.2e-86 322.4 322 53.4
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 5.4e-86 322.0 311 54.7
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 7.1e-86 321.6 348 53.2
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 7.1e-86 321.6 346 52.6
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 1.6e-85 320.5 342 53.8
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 4.6e-85 318.9 330 54.2
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 6.0e-85 318.5 360 51.7
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 7.8e-85 318.2 311 54.7
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 1.0e-84 317.8 344 53.5
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 1.0e-84 317.8 347 52.2
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 2.3e-84 316.6 358 52.2
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 6.6e-84 315.1 351 51.6
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 6.6e-84 315.1 344 52.3
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 8.7e-84 314.7 331 55.3
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 1.1e-83 314.3 278 61.5
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 9.6e-83 311.2 343 52.8
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 1.1e-81 307.8 347 49.3
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 9.0e-81 304.7 278 59.4
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 1.2e-80 304.3 315 52.4
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 1.2e-80 304.3 315 52.4
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 1.5e-80 303.9 338 50.3
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 4.5e-80 302.4 341 52.2
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 1.7e-79 300.4 332 52.1
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 3.2e-78 296.2 343 48.7
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 1.2e-77 294.3 429 42.4
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 6.0e-77 292.0 279 57.7
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 1.3e-76 290.8 326 51.2
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 1.3e-76 290.8 307 51.8
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 1.8e-73 280.4 345 46.7
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 2.0e-64 250.4 219 62.1
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 1.2e-61 241.1 219 60.7
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 1.2e-53 214.5 242 49.6
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 2.2e-50 203.8 163 63.2
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 2.4e-49 200.3 292 39.0
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 2.2e-42 177.2 296 41.9
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 4.1e-41 172.9 160 55.0
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 2.0e-35 154.1 194 45.9
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 4.1e-33 146.4 333 35.1
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea HOM05D006958 ORTHO05D008814 1.6e-32 144.4 265 39.2
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 1.3e-31 141.4 261 34.5
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 3.8e-31 139.8 200 45.5
Os07g0586000 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 8.5e-31 138.7 169 47.9
SEGI_02529 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 9.4e-30 135.2 171 45.6
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 1.2e-21 108.2 124 48.4
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 2.1e-21 107.5 137 48.2
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 8.0e-21 105.5 98 58.2
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 5.7e-19 99.4 125 48.8
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 1.8e-17 94.4 110 49.1
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 1.1e-14 85.1 177 35.0
Psat7g107960 Pisum sativum HOM05D006958 ORTHO05D008814 1.2e-13 81.6 109 43.1
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 2.8e-10 70.5 84 44.0
Glyma.07G264001 Glycine max HOM05D006958 ORTHO05D008814 1.8e-09 67.8 76 47.4
Psat0s3396g0160 Pisum sativum HOM05D006958 ORTHO05D008814 1.6e-08 64.7 38 73.7
HPP92_009560 Vanilla planifolia HOM05D001084 ORTHO05D001275 2.7e-08 63.9 63 52.4
Ah.09g227430 Amaranthus hybridus HOM05D006958 ORTHO05D008814 2.3e-07 60.8 65 47.7


User provided reference genes

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