Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0229231 Helianthus annuus HOM05D007204 ORTHO05D008593 1.3e-126 456.4 237 100.0
Lsat_1_v5_gn_9_18401 Lactuca sativa HOM05D007204 ORTHO05D008593 2.3e-75 286.2 235 66.8
ECA247G3086 Erigeron canadensis HOM05D007204 ORTHO05D008593 1.7e-70 270.0 340 49.4
Actinidia32616 Actinidia chinensis HOM05D007204 ORTHO05D008593 2.6e-58 229.6 234 53.4
Dinv09663 Davidia involucrata HOM05D007204 ORTHO05D008593 2.8e-57 226.1 234 55.1
GSVIVG01024663001 Vitis vinifera HOM05D007204 ORTHO05D008593 6.3e-57 224.9 234 56.0
Cc01_g14730 Coffea canephora HOM05D007204 ORTHO05D008593 2.9e-54 216.1 236 51.3
TWI31G1133 Tripterygium wilfordii HOM05D007204 ORTHO05D008593 5.0e-54 215.3 234 52.1
Potri.001G281500 Populus trichocarpa HOM05D007204 ORTHO05D008593 9.5e-53 211.1 232 50.9
CiPaw.14G055100 Carya illinoinensis HOM05D007204 ORTHO05D008593 2.1e-52 209.9 234 50.0
Nitab4.5_0007880g0040 Nicotiana tabacum HOM05D007204 ORTHO05D008593 3.6e-52 209.1 236 48.7
PGR102G0940 Punica granatum HOM05D007204 ORTHO05D008593 1.4e-51 207.2 234 50.0
Rhsim13G0065200 Rhododendron simsii HOM05D007204 ORTHO05D008593 1.4e-51 207.2 299 42.8
Duzib168G0028 Durio zibethinus HOM05D007204 ORTHO05D008593 2.3e-51 206.5 234 49.6
Prupe.6G050500 Prunus persica HOM05D007204 ORTHO05D008593 1.2e-50 204.1 242 46.7
PGSC0003DMG400030457 Solanum tuberosum HOM05D007204 ORTHO05D008593 2.6e-50 203.0 234 49.6
Thecc.09G355900 Theobroma cacao HOM05D007204 ORTHO05D008593 1.3e-49 200.7 234 47.9
QL01p040026 Quercus lobata HOM05D007204 ORTHO05D008593 2.2e-49 199.9 234 50.4
Gorai.003G149500 Gossypium raimondii HOM05D007204 ORTHO05D008593 6.3e-49 198.4 233 48.1
Gohir.D03G142400 Gossypium hirsutum HOM05D007204 ORTHO05D008593 1.8e-48 196.8 233 48.1
Nn2g10986 Nelumbo nucifera HOM05D007204 ORTHO05D008593 5.4e-48 195.3 234 47.4
Atru.chr3.4133 Acer truncatum HOM05D007204 ORTHO05D008593 1.6e-47 193.7 231 49.4
FAN16G2350 Fragaria x ananassa HOM05D007204 ORTHO05D008593 4.5e-47 192.2 241 46.5
RcHm_v2.0_Chr5g0071301 Rosa chinensis HOM05D007204 ORTHO05D008593 1.0e-46 191.0 237 46.4
MD11G1063300 Malus domestica HOM05D007204 ORTHO05D008593 1.7e-46 190.3 247 44.5
Psat5g153840 Pisum sativum HOM05D007204 ORTHO05D008593 1.7e-46 190.3 236 47.9
FvH4_3g39530 Fragaria vesca HOM05D007204 ORTHO05D008593 2.3e-46 189.9 241 46.1
Sed0020276 Sechium edule HOM05D007204 ORTHO05D008593 2.3e-46 189.9 234 46.2
FAN25G1877 Fragaria x ananassa HOM05D007204 ORTHO05D008593 5.0e-46 188.7 241 46.1
COL.COLO4_11129 Corchorus olitorius HOM05D007204 ORTHO05D008593 8.6e-46 188.0 228 45.6
PSO339G1295 Papaver somniferum HOM05D007204 ORTHO05D008593 8.6e-46 188.0 231 47.6
Peaxi162Scf00390g00079 Petunia axillaris HOM05D007204 ORTHO05D008593 8.6e-46 188.0 242 46.7
Hma1.2p1_0841F.1_g226930 Hydrangea macrophylla HOM05D007204 ORTHO05D008593 1.9e-45 186.8 166 57.8
Sc21g0005220 Simmondsia chinensis HOM05D007204 ORTHO05D008593 1.9e-45 186.8 224 48.7
TPR.G32886 Trifolium pratense HOM05D007204 ORTHO05D008593 2.5e-45 186.4 236 47.0
Eucgr.B03990 Eucalyptus grandis HOM05D007204 ORTHO05D008593 7.3e-45 184.9 233 46.8
VMungo0540G1924 Vigna mungo HOM05D007204 ORTHO05D008593 7.3e-45 184.9 219 49.3
Lj6g0005890 Lotus japonicus HOM05D007204 ORTHO05D008593 9.5e-45 184.5 228 48.2
Phvul.006G073000 Phaseolus vulgaris HOM05D007204 ORTHO05D008593 1.2e-44 184.1 231 47.2
AUR62009682 Chenopodium quinoa HOM05D007204 ORTHO05D008593 2.8e-44 183.0 227 47.1
Manes.17G034600 Manihot esculenta HOM05D007204 ORTHO05D008593 4.7e-44 182.2 230 47.4
MSTRG.9779 Avicennia marina HOM05D007204 ORTHO05D008593 1.8e-43 180.3 234 45.3
PSO801G0770 Papaver somniferum HOM05D007204 ORTHO05D008593 3.1e-43 179.5 229 46.7
TAR623G0341 Trochodendron aralioides HOM05D007204 ORTHO05D008593 5.2e-43 178.7 187 54.0
DCAR_012274 Daucus carota HOM05D007204 ORTHO05D008593 8.9e-43 177.9 178 53.9
Ciclev10029273m.g Citrus clementina HOM05D007204 ORTHO05D008593 2.6e-42 176.4 195 47.2
Migut.N00766 Erythranthe guttata HOM05D007204 ORTHO05D008593 2.6e-42 176.4 234 45.3
CsaV3_1G015330 Cucumis sativus L. HOM05D007204 ORTHO05D008593 2.9e-41 172.9 225 45.3
MELO3C026086.2 Cucumis melo HOM05D007204 ORTHO05D008593 4.9e-41 172.2 229 45.0
THA.LOC104800761 Tarenaya hassleriana HOM05D007204 ORTHO05D008593 4.9e-41 172.2 236 44.1
arahy.Tifrunner.gnm1.ann1.QCA2Y7 Arachis hypogaea HOM05D007204 ORTHO05D008593 1.4e-40 170.6 249 43.0
arahy.Tifrunner.gnm1.ann1.IVNQ32 Arachis hypogaea HOM05D007204 ORTHO05D008593 3.2e-40 169.5 260 41.5
Carub.0001s0635 Capsella rubella HOM05D007204 ORTHO05D008593 9.2e-40 167.9 228 43.9
SGA_v2.0_scaffold146G36125 Striga asiatica HOM05D007204 ORTHO05D008593 9.2e-40 167.9 227 46.7
Nitab4.5_0009741g0040 Nicotiana tabacum HOM05D007204 ORTHO05D008593 2.0e-39 166.8 295 38.0
BcaC05g24670 Brassica carinata HOM05D007204 ORTHO05D008593 3.5e-39 166.0 232 45.3
Cfa011760 Carpinus fangiana HOM05D007204 ORTHO05D008593 3.5e-39 166.0 181 51.4
AT1G07060 Arabidopsis thaliana HOM05D007204 ORTHO05D008593 6.0e-39 165.2 236 44.5
Sp1g05780 Schrenkiella parvula HOM05D007204 ORTHO05D008593 1.0e-38 164.5 234 44.4
BcaNung06767 Brassica carinata HOM05D007204 ORTHO05D008593 1.7e-38 163.7 232 44.8
CANSAT54G2573 Cannabis sativa HOM05D007204 ORTHO05D008593 2.3e-38 163.3 207 46.4
AUR62001886 Chenopodium quinoa HOM05D007204 ORTHO05D008593 2.3e-38 163.3 267 40.8
Gohir.A03G026100 Gossypium hirsutum HOM05D007204 ORTHO05D008593 2.3e-38 163.3 181 50.3
C05p05140 Brassica napus HOM05D007204 ORTHO05D008593 3.0e-38 162.9 232 44.4
Medtr3g031720 Medicago truncatula HOM05D007204 ORTHO05D008593 3.0e-38 162.9 192 46.4
AL1G17180 Arabidopsis lyrata HOM05D007204 ORTHO05D008593 6.6e-38 161.8 234 43.2
CARHR006750 Cardamine hirsuta HOM05D007204 ORTHO05D008593 8.6e-38 161.4 234 43.6
ClCG03G000270 Citrullus lanatus HOM05D007204 ORTHO05D008593 1.1e-37 161.0 235 44.3
A10p05600 Brassica napus HOM05D007204 ORTHO05D008593 2.5e-37 159.8 232 44.4
Oeu034090.2 Olea europaea HOM05D007204 ORTHO05D008593 2.5e-37 159.8 244 42.6
HPP92_019711 Vanilla planifolia HOM05D000883 ORTHO05D002942 2.5e-37 159.8 238 42.0
Aqoxy2G00798 Aquilegia oxysepala HOM05D007204 ORTHO05D008593 5.6e-37 158.7 169 50.9
FAN11G3207 Fragaria x ananassa HOM05D007204 ORTHO05D008593 9.5e-37 157.9 211 44.1
Aa31LG1G8110 Aethionema arabicum HOM05D007204 ORTHO05D008593 1.4e-35 154.1 235 41.7
BcaNung06763 Brassica carinata HOM05D007204 ORTHO05D008593 6.8e-35 151.8 252 41.7
FAN21G2638 Fragaria x ananassa HOM05D007204 ORTHO05D008593 1.2e-34 151.0 221 42.1
Thhalv10009490m.g Eutrema salsugineum HOM05D007204 ORTHO05D008593 7.5e-34 148.3 206 44.7
Medtr3g031680 Medicago truncatula HOM05D007204 ORTHO05D008593 7.5e-34 148.3 182 45.6
BolC5t29286H Brassica oleracea HOM05D007204 ORTHO05D008593 9.8e-34 147.9 256 40.2
BraA10t42821Z Brassica rapa HOM05D007204 ORTHO05D008593 9.8e-34 147.9 256 40.2
MBI03_g33621_MAGBIO Magnolia biondii HOM05D007204 ORTHO05D008593 1.7e-33 147.1 291 35.7
Lj2A1091T48 Lonicera japonica HOM05D007204 ORTHO05D008593 3.7e-33 146.0 118 60.2
Solyc06g082320.4 Solanum lycopersicum HOM05D007204 ORTHO05D008593 2.1e-31 140.2 133 55.6
Sabra16G0175100 Salix brachista HOM05D007204 ORTHO05D008593 2.7e-31 139.8 230 40.4
Hund18956 Selenicereus undatus HOM05D007204 ORTHO05D008593 3.9e-30 136.0 174 46.6
SGA_v2.0_scaffold120G32948 Striga asiatica HOM05D007204 ORTHO05D008593 6.6e-30 135.2 309 35.3
Glyma.18G058101 Glycine max HOM05D007204 ORTHO05D008593 4.3e-29 132.5 133 52.6
unitig_94.g28350 Utricularia gibba HOM05D007204 ORTHO05D008593 1.4e-27 127.5 215 40.5
SalBow2G2431 Salvia bowleyana HOM05D007204 ORTHO05D008593 3.1e-27 126.3 194 41.2
vmacro02927 Vaccinium macrocarpon HOM05D007204 ORTHO05D008593 7.6e-26 121.7 206 38.3
BcaC05g24674 Brassica carinata HOM05D007204 ORTHO05D008593 8.3e-25 118.2 185 42.7
Os12g0106100 Oryza sativa ssp. japonica HOM05D007204 ORTHO05D008593 5.4e-24 115.5 220 35.5
Lalb_Chr15g0083171 Lupinus albus HOM05D007204 ORTHO05D008593 1.6e-23 114.0 126 50.8
Os11g0106800 Oryza sativa ssp. japonica HOM05D007204 ORTHO05D008593 2.3e-22 110.2 225 35.6
Zm00001eb195020 Zea mays HOM05D007204 ORTHO05D008593 3.9e-22 109.4 236 33.9
Sopen06g033710 Solanum pennellii HOM05D007204 ORTHO05D008593 8.6e-22 108.2 138 45.7
CSS0041349 Camellia sinensis var. sinensis HOM05D007204 ORTHO05D008593 2.5e-21 106.7 118 49.2
CSS0017241 Camellia sinensis var. sinensis HOM05D007204 ORTHO05D008593 7.3e-21 105.1 118 48.3
SEGI_02179 Sequoiadendron giganteum HOM05D056589 ORTHO05D008593 3.6e-20 102.8 236 33.1
ATR0174G030 Amborella trichopoda HOM05D007204 ORTHO05D008593 2.4e-19 100.1 179 36.3
SMO358G0161 Selaginella moellendorffii HOM05D007204 ORTHO05D008593 3.9e-14 82.8 232 28.0
TPR.G22099 Trifolium pratense HOM05D007204 ORTHO05D008593 1.7e-06 57.4 118 32.2


User provided reference genes

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