Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 1.7e-35 152.9 132 100.0
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 3.7e-22 108.6 123 86.2
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 4.1e-21 105.1 129 84.5
Cfa015380 Carpinus fangiana HOM05D006719 ORTHO05D007063 1.5e-20 103.2 130 50.8
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 6.5e-19 97.8 124 74.2
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 6.5e-19 97.8 124 74.2
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 5.5e-18 94.7 125 80.8
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 1.8e-16 89.7 125 79.2
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 1.8e-16 89.7 130 73.8
CiPaw.02G083300 Carya illinoinensis HOM05D006719 ORTHO05D007063 3.9e-16 88.6 128 76.6
Peaxi162Scf00534g00017 Petunia axillaris HOM05D006719 ORTHO05D007063 6.7e-16 87.8 130 42.3
vmacro08144 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 1.5e-15 86.7 128 70.3
vmacro22972 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 1.5e-15 86.7 128 70.3
Dinv29768 Davidia involucrata HOM05D001303 ORTHO05D001129 4.4e-15 85.1 105 79.0
Actinidia40259 Actinidia chinensis HOM05D006719 ORTHO05D007063 5.7e-15 84.7 128 73.4
MD13G1169300 Malus domestica HOM05D006719 ORTHO05D007063 5.7e-15 84.7 124 70.2
Peaxi162Scf00024g00041 Petunia axillaris HOM05D006719 ORTHO05D007063 7.4e-15 84.3 132 69.7
MD16G1170500 Malus domestica HOM05D006719 ORTHO05D007063 2.2e-14 82.8 115 79.1
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 3.7e-14 82.0 117 72.6
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 3.7e-14 82.0 128 66.4
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 4.8e-14 81.6 131 64.9
PSO170G6252 Papaver somniferum HOM05D006719 ORTHO05D007063 8.2e-14 80.9 124 74.2
Atru.chr4.2828 Acer truncatum HOM05D006719 ORTHO05D007063 1.8e-13 79.7 127 71.7
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 1.8e-13 79.7 116 70.7
Peaxi162Scf00024g00231 Petunia axillaris HOM05D006719 ORTHO05D007063 1.8e-13 79.7 119 73.1
Prupe.1G137900 Prunus persica HOM05D006719 ORTHO05D007063 1.8e-13 79.7 125 71.2
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 2.4e-13 79.3 128 60.9
Lsat_1_v5_gn_6_15060 Lactuca sativa HOM05D006719 ORTHO05D007063 2.4e-13 79.3 125 78.4
THA.LOC104821772 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 2.4e-13 79.3 130 60.8
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 2.4e-13 79.3 128 66.4
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 3.1e-13 79.0 126 68.3
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 4.1e-13 78.6 126 68.3
Psat1g153440 Pisum sativum HOM05D006719 ORTHO05D007063 4.1e-13 78.6 123 76.4
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 5.3e-13 78.2 128 67.2
DCAR_030531 Daucus carota HOM05D006719 ORTHO05D007063 7.0e-13 77.8 112 68.8
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 7.0e-13 77.8 126 69.0
MSTRG.21797 Avicennia marina HOM05D006719 ORTHO05D007063 1.2e-12 77.0 111 65.8
TAR362G0876 Trochodendron aralioides HOM05D006719 ORTHO05D007063 1.6e-12 76.6 125 72.0
TAR365G1095 Trochodendron aralioides HOM05D006719 ORTHO05D007063 4.5e-12 75.1 126 73.0
Oeu037752.1 Olea europaea HOM05D006719 ORTHO05D007063 7.7e-12 74.3 130 68.5
CiPaw.01G149100 Carya illinoinensis HOM05D006719 ORTHO05D007063 1.3e-11 73.6 110 46.4
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 1.3e-11 73.6 114 78.9
PSO210G7501 Papaver somniferum HOM05D006719 ORTHO05D007063 2.2e-11 72.8 124 71.8
Sopen01g028510 Solanum pennellii HOM05D006719 ORTHO05D007063 2.9e-11 72.4 127 69.3
THA.LOC104820261 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 2.9e-11 72.4 59 72.9
GSVIVG01017752001 Vitis vinifera HOM05D006719 ORTHO05D007063 3.8e-11 72.0 123 72.4
Carub.0007s2587 Capsella rubella HOM05D006719 ORTHO05D007063 5.0e-11 71.6 120 71.7
Lj6g0006694 Lotus japonicus HOM05D006719 ORTHO05D007063 6.5e-11 71.2 122 73.8
Nn3g21430 Nelumbo nucifera HOM05D006719 ORTHO05D007063 6.5e-11 71.2 130 70.0
Duzib212G0625 Durio zibethinus HOM05D006719 ORTHO05D007063 8.5e-11 70.9 128 62.5
RcHm_v2.0_Chr4g0422101 Rosa chinensis HOM05D006719 ORTHO05D007063 1.1e-10 70.5 134 67.2
Solyc01g066900.4 Solanum lycopersicum HOM05D006719 ORTHO05D007063 1.5e-10 70.1 127 65.4
Duzib052G0445 Durio zibethinus HOM05D006719 ORTHO05D007063 1.9e-10 69.7 127 67.7
Manes.15G012900 Manihot esculenta HOM05D006719 ORTHO05D007063 1.9e-10 69.7 130 69.2
Gohir.D09G240400 Gossypium hirsutum HOM05D006719 ORTHO05D007063 4.2e-10 68.6 108 70.4
Gohir.A09G239500 Gossypium hirsutum HOM05D006719 ORTHO05D007063 5.5e-10 68.2 108 67.6
Ca_01942_v3 Cicer arietinum L. HOM05D006719 ORTHO05D007063 7.2e-10 67.8 111 74.8
Nn4g25876 Nelumbo nucifera HOM05D006719 ORTHO05D007063 7.2e-10 67.8 116 63.8
Lalb_Chr15g0083521 Lupinus albus HOM05D006719 ORTHO05D007063 2.1e-09 66.2 120 74.2
QL06p008791 Quercus lobata HOM05D006719 ORTHO05D007063 2.1e-09 66.2 121 74.4
Glyma.15G147300 Glycine max HOM05D006719 ORTHO05D007063 4.7e-09 65.1 107 76.6
Zm00001eb137600 Zea mays HOM05D006719 ORTHO05D007063 4.7e-09 65.1 128 50.8
Cpa.g.sc16.165 Carica papaya HOM05D006719 ORTHO05D007063 1.8e-08 63.2 56 60.7
BraA08t33189Z Brassica rapa HOM05D006719 ORTHO05D007063 2.3e-08 62.8 118 62.7
Sp7g14160 Schrenkiella parvula HOM05D006719 ORTHO05D007063 2.3e-08 62.8 122 69.7
Aqoxy2G03000 Aquilegia oxysepala HOM05D000520 ORTHO05D000399 3.0e-08 62.4 127 66.1
SalBow2G1281 Salvia bowleyana HOM05D006719 ORTHO05D007063 3.0e-08 62.4 41 73.2
CANSAT78G1100 Cannabis sativa HOM05D006719 ORTHO05D007063 4.0e-08 62.0 53 64.2
Migut.G00270 Erythranthe guttata HOM05D006719 ORTHO05D007063 5.2e-08 61.6 93 72.0
FAN12G0931 Fragaria x ananassa HOM05D006719 ORTHO05D007063 6.7e-08 61.2 97 78.4
PGSC0003DMG400011322 Solanum tuberosum HOM05D006719 ORTHO05D007063 6.7e-08 61.2 127 67.7
SGA_v2.0_scaffold147G36286 Striga asiatica HOM05D006719 ORTHO05D007063 6.7e-08 61.2 52 67.3
Aa31LG10G6320 Aethionema arabicum HOM05D006719 ORTHO05D007063 8.8e-08 60.8 117 69.2
Thhalv10026485m.g Eutrema salsugineum HOM05D006719 ORTHO05D007063 1.2e-07 60.5 116 66.4
Sc19g0005170 Simmondsia chinensis HOM05D006719 ORTHO05D007063 1.2e-07 60.5 128 67.2
CARHR290290 Cardamine hirsuta HOM05D006719 ORTHO05D007063 1.5e-07 60.1 113 69.9
ClCG05G006040 Citrullus lanatus HOM05D006719 ORTHO05D007063 3.3e-07 58.9 117 71.8
MELO3C006659.2 Cucumis melo HOM05D006719 ORTHO05D007063 3.3e-07 58.9 117 71.8
BolC8t48317H Brassica oleracea HOM05D006719 ORTHO05D007063 5.7e-07 58.2 129 34.1
FvH4_4g17930 Fragaria vesca HOM05D006719 ORTHO05D007063 5.7e-07 58.2 119 72.3
FAN12G0915 Fragaria x ananassa HOM05D006719 ORTHO05D007063 5.7e-07 58.2 119 72.3
TWI09G1121 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 5.7e-07 58.2 101 79.2
AL7G39510 Arabidopsis lyrata HOM05D006719 ORTHO05D007063 7.5e-07 57.8 55 56.4
arahy.Tifrunner.gnm1.ann1.WNX5DB Arachis hypogaea HOM05D006719 ORTHO05D007063 7.5e-07 57.8 129 65.1
CsaV3_3G014580 Cucumis sativus L. HOM05D006719 ORTHO05D007063 7.5e-07 57.8 117 71.8
Sed0003703 Sechium edule HOM05D006719 ORTHO05D007063 7.5e-07 57.8 122 70.5
Actinidia01465 Actinidia chinensis HOM05D006719 ORTHO05D007063 9.7e-07 57.4 62 59.7
BcaC07g37932 Brassica carinata HOM05D006719 ORTHO05D007063 9.7e-07 57.4 131 32.8
A08p11980 Brassica napus HOM05D006719 ORTHO05D007063 9.7e-07 57.4 53 60.4
TPR.G425 Trifolium pratense HOM05D006719 ORTHO05D007063 9.7e-07 57.4 125 68.8
Glyma.09G045300 Glycine max HOM05D006719 ORTHO05D007063 1.7e-06 56.6 108 73.1
Medtr2g436860 Medicago truncatula HOM05D006719 ORTHO05D007063 1.7e-06 56.6 48 66.7
Sed0000550 Sechium edule HOM05D006719 ORTHO05D007063 1.7e-06 56.6 113 74.3
CAN.G129.20 Capsicum annuum HOM05D006719 ORTHO05D007063 2.2e-06 56.2 127 64.6
AT4G15790 Arabidopsis thaliana HOM05D006719 ORTHO05D007063 2.8e-06 55.8 56 55.4
Hund20562 Selenicereus undatus HOM05D006719 ORTHO05D007063 2.8e-06 55.8 118 55.9
FAN07G2874 Fragaria x ananassa HOM05D006719 ORTHO05D007063 3.7e-06 55.5 127 37.8
Aqoxy5G00712 Aquilegia oxysepala HOM05D006719 ORTHO05D007063 4.8e-06 55.1 118 65.3
FAN17G0015 Fragaria x ananassa HOM05D006719 ORTHO05D007063 4.8e-06 55.1 126 37.3
Ah.04g153870 Amaranthus hybridus HOM05D006719 ORTHO05D007063 8.2e-06 54.3 108 70.4


User provided reference genes

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