Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0226371 Helianthus annuus HOM05D007406 ORTHO05D009434 4.0e-111 404.8 212 100.0
Actinidia10229 Actinidia chinensis HOM05D007406 ORTHO05D009434 3.5e-83 312.0 198 79.3
CiPaw.08G053000 Carya illinoinensis HOM05D007406 ORTHO05D009434 2.3e-82 309.3 210 75.7
TAR628G0119 Trochodendron aralioides HOM05D007406 ORTHO05D009434 3.0e-82 308.9 213 76.1
TWI36G1291 Tripterygium wilfordii HOM05D007406 ORTHO05D009434 3.9e-82 308.5 218 72.9
Prupe.1G418200 Prunus persica HOM05D007406 ORTHO05D009434 8.7e-82 307.4 216 72.7
MD15G1064200 Malus domestica HOM05D007406 ORTHO05D009434 2.5e-81 305.8 218 72.9
FAN24G2334 Fragaria x ananassa HOM05D007406 ORTHO05D009434 4.3e-81 305.1 219 73.1
RcHm_v2.0_Chr6g0310141 Rosa chinensis HOM05D007406 ORTHO05D009434 1.6e-80 303.1 219 72.6
ECA247G1434 Erigeron canadensis HOM05D007406 ORTHO05D009434 3.6e-80 302.0 217 71.9
Cpa.g.sc160.29 Carica papaya HOM05D007406 ORTHO05D009434 4.8e-80 301.6 214 72.4
FvH4_2g32510 Fragaria vesca HOM05D007406 ORTHO05D009434 6.2e-80 301.2 219 72.1
Prupe.6G207800 Prunus persica HOM05D007406 ORTHO05D009434 8.1e-80 300.8 207 73.9
Ciclev10002365m.g Citrus clementina HOM05D007406 ORTHO05D009434 2.4e-79 299.3 218 71.6
Potri.002G114400 Populus trichocarpa HOM05D007406 ORTHO05D009434 5.3e-79 298.1 219 72.6
DCAR_020070 Daucus carota HOM05D007406 ORTHO05D009434 9.0e-79 297.4 222 69.8
Cfa013727 Carpinus fangiana HOM05D007406 ORTHO05D009434 2.6e-78 295.8 212 74.1
Manes.18G050400 Manihot esculenta HOM05D007406 ORTHO05D009434 2.6e-78 295.8 218 71.6
Lsat_1_v5_gn_1_721 Lactuca sativa HOM05D007406 ORTHO05D009434 3.4e-78 295.4 191 78.5
Thecc.08G083300 Theobroma cacao HOM05D007406 ORTHO05D009434 3.4e-78 295.4 214 68.7
vmacro21408 Vaccinium macrocarpon HOM05D007406 ORTHO05D009434 5.8e-78 294.7 241 66.4
PGR031G1333 Punica granatum HOM05D007406 ORTHO05D009434 9.9e-78 293.9 224 71.0
Sopen04g031040 Solanum pennellii HOM05D007406 ORTHO05D009434 9.9e-78 293.9 215 71.2
AL3G23880 Arabidopsis lyrata HOM05D007406 ORTHO05D009434 3.8e-77 292.0 212 71.7
Hma1.2p1_1926F.1_g307730 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 3.8e-77 292.0 216 72.7
FAN27G1006 Fragaria x ananassa HOM05D007406 ORTHO05D009434 4.9e-77 291.6 218 69.3
CANSAT25G0188 Cannabis sativa HOM05D007406 ORTHO05D009434 6.4e-77 291.2 214 70.1
Thhalv10021516m.g Eutrema salsugineum HOM05D007406 ORTHO05D009434 8.4e-77 290.8 212 70.8
PSO017G2718 Papaver somniferum HOM05D007406 ORTHO05D009434 8.4e-77 290.8 213 70.4
Carub.0003s1158 Capsella rubella HOM05D007406 ORTHO05D009434 1.1e-76 290.4 212 70.8
Sp3g10440 Schrenkiella parvula HOM05D007406 ORTHO05D009434 1.1e-76 290.4 212 70.3
AT3G12210 Arabidopsis thaliana HOM05D007406 ORTHO05D009434 1.9e-76 289.7 212 71.2
Gohir.A02G079900 Gossypium hirsutum HOM05D007406 ORTHO05D009434 1.9e-76 289.7 216 68.1
Duzib041G0608 Durio zibethinus HOM05D007406 ORTHO05D009434 2.4e-76 289.3 216 68.5
Solyc04g077450.3 Solanum lycopersicum HOM05D007406 ORTHO05D009434 2.4e-76 289.3 212 70.8
Glyma.14G090300 Glycine max HOM05D007406 ORTHO05D009434 3.2e-76 288.9 221 69.7
Aqoxy6G02928 Aquilegia oxysepala HOM05D007406 ORTHO05D009434 4.2e-76 288.5 217 70.5
VMungo0647G2305 Vigna mungo HOM05D007406 ORTHO05D009434 4.2e-76 288.5 221 69.7
MELO3C016844.2 Cucumis melo HOM05D007406 ORTHO05D009434 5.4e-76 288.1 216 69.4
CAN.G416.4 Capsicum annuum HOM05D007406 ORTHO05D009434 7.1e-76 287.7 212 69.8
Cc10_g07740 Coffea canephora HOM05D007406 ORTHO05D009434 7.1e-76 287.7 217 68.2
Phvul.001G031500 Phaseolus vulgaris HOM05D007406 ORTHO05D009434 7.1e-76 287.7 226 69.0
arahy.Tifrunner.gnm1.ann1.GL3N7R Arachis hypogaea HOM05D007406 ORTHO05D009434 9.3e-76 287.3 221 67.9
THA.LOC104799833 Tarenaya hassleriana HOM05D007406 ORTHO05D009434 9.3e-76 287.3 207 71.5
TPR.G13149 Trifolium pratense HOM05D007406 ORTHO05D009434 9.3e-76 287.3 219 68.9
Migut.N02801 Erythranthe guttata HOM05D007406 ORTHO05D009434 1.6e-75 286.6 212 69.8
BolC5t34221H Brassica oleracea HOM05D007406 ORTHO05D009434 2.7e-75 285.8 211 69.2
Haze_22374 Corylus avellana HOM05D007406 ORTHO05D009434 2.7e-75 285.8 240 66.2
BraA05t22509Z Brassica rapa HOM05D007406 ORTHO05D009434 3.5e-75 285.4 211 69.7
Gohir.D02G087800 Gossypium hirsutum HOM05D007406 ORTHO05D009434 3.5e-75 285.4 216 68.5
Gorai.005G098400 Gossypium raimondii HOM05D007406 ORTHO05D009434 4.6e-75 285.0 216 68.5
Eucgr.F02216 Eucalyptus grandis HOM05D007406 ORTHO05D009434 1.3e-74 283.5 218 68.8
Atru.chr13.879 Acer truncatum HOM05D007406 ORTHO05D009434 1.8e-74 283.1 217 70.0
Lj5g0009058 Lotus japonicus HOM05D007406 ORTHO05D009434 2.3e-74 282.7 221 69.2
Medtr1g017290 Medicago truncatula HOM05D007406 ORTHO05D009434 3.0e-74 282.3 219 67.6
Nn6g34540 Nelumbo nucifera HOM05D007406 ORTHO05D009434 3.0e-74 282.3 212 67.5
Sed0009876 Sechium edule HOM05D007406 ORTHO05D009434 3.0e-74 282.3 215 70.2
ClCG05G017610 Citrullus lanatus HOM05D007406 ORTHO05D009434 3.9e-74 282.0 215 70.2
Aa31LG11G6470 Aethionema arabicum HOM05D007406 ORTHO05D009434 5.1e-74 281.6 212 69.3
Ca_06987_v3 Cicer arietinum L. HOM05D007406 ORTHO05D009434 8.7e-74 280.8 219 67.6
Lalb_Chr14g0368031 Lupinus albus HOM05D007406 ORTHO05D009434 3.3e-73 278.9 220 67.7
AUR62034986 Chenopodium quinoa HOM05D007406 ORTHO05D009434 2.4e-71 272.7 219 68.0
ATR0739G008 Amborella trichopoda HOM05D007406 ORTHO05D009434 9.0e-71 270.8 211 64.0
arahy.Tifrunner.gnm1.ann1.V0H9ZK Arachis hypogaea HOM05D007406 ORTHO05D009434 1.2e-70 270.4 221 65.2
SalBow2G1084 Salvia bowleyana HOM05D007406 ORTHO05D009434 1.2e-70 270.4 212 65.6
CSS0019783 Camellia sinensis var. sinensis HOM05D007406 ORTHO05D009434 7.6e-70 267.7 167 80.2
Ah.05g166920 Amaranthus hybridus HOM05D007406 ORTHO05D009434 1.3e-69 266.9 219 67.1
MSTRG.22203 Avicennia marina HOM05D007406 ORTHO05D009434 2.2e-69 266.2 214 64.5
Hund05268 Selenicereus undatus HOM05D007406 ORTHO05D009434 2.9e-69 265.8 208 66.8
Rhsim06G0065300 Rhododendron simsii HOM05D007406 ORTHO05D009434 2.5e-68 262.7 167 78.4
PSO170G2494 Papaver somniferum HOM05D007406 ORTHO05D009434 3.5e-67 258.8 183 71.0
Zm00001eb215640 Zea mays HOM05D007406 ORTHO05D009434 4.6e-67 258.5 207 64.3
BcaC05g29272 Brassica carinata HOM05D007406 ORTHO05D009434 6.0e-67 258.1 167 74.3
EL10Ac1g02342 Beta vulgaris HOM05D007406 ORTHO05D009434 1.0e-66 257.3 210 66.2
MBI16_g35726_MAGBIO Magnolia biondii HOM05D007406 ORTHO05D009434 1.0e-66 257.3 224 59.4
Nitab4.5_0007871g0020 Nicotiana tabacum HOM05D007406 ORTHO05D009434 1.8e-66 256.5 214 65.4
SGA_v2.0_scaffold28G11843 Striga asiatica HOM05D007406 ORTHO05D009434 1.1e-65 253.8 214 62.1
Sabra02G0090500 Salix brachista HOM05D000717 ORTHO05D000555 4.3e-65 251.9 167 76.0
CsaV3_4G035340 Cucumis sativus L. HOM05D007406 ORTHO05D009434 7.4e-65 251.1 171 73.7
Lj4C76T9 Lonicera japonica HOM05D007406 ORTHO05D009434 1.1e-63 247.3 154 78.6
Oeu053653.1 Olea europaea HOM05D007406 ORTHO05D009434 1.2e-62 243.8 179 67.6
COL.COLO4_28451 Corchorus olitorius HOM05D007406 ORTHO05D009434 8.4e-61 237.7 193 63.2
Peaxi162Scf01161g00328 Petunia axillaris HOM05D007406 ORTHO05D009434 1.1e-57 227.3 214 59.3
SEGI_23576 Sequoiadendron giganteum HOM05D007406 ORTHO05D009434 1.9e-57 226.5 226 58.0
GSVIVG01009288001 Vitis vinifera HOM05D007406 ORTHO05D009434 5.7e-57 224.9 152 77.6
Pp3c10_2700 Physcomitrium patens HOM05D007406 ORTHO05D009434 4.8e-56 221.9 213 54.0
CARHR086780 Cardamine hirsuta HOM05D007406 ORTHO05D009434 1.5e-54 216.9 138 76.1
AUR62039350 Chenopodium quinoa HOM05D007406 ORTHO05D009434 1.3e-48 197.2 154 70.8
CDE04G3630 Ceratophyllum demersum HOM05D007406 ORTHO05D009434 1.0e-45 187.6 141 63.8
Nitab4.5_0001494g0090 Nicotiana tabacum HOM05D007406 ORTHO05D009434 9.4e-44 181.0 214 51.4
A05p37120 Brassica napus HOM05D007406 ORTHO05D004372 1.2e-43 180.6 140 71.4
C05p55550 Brassica napus HOM05D007406 ORTHO05D004372 1.6e-43 180.3 140 70.7
Sc15g0005330 Simmondsia chinensis HOM05D007406 ORTHO05D009434 1.4e-42 177.2 135 64.4
Aa31sc118G30 Aethionema arabicum HOM05D007406 ORTHO05D009434 2.2e-29 133.3 95 74.7
Hma1.2p1_1926F.1_g307740 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 2.1e-27 126.7 76 86.8
Hma1.2p1_2378F.1_g320925 Hydrangea macrophylla HOM05D007406 ORTHO05D009434 2.1e-27 126.7 76 86.8
Dinv39200 Davidia involucrata HOM05D007406 ORTHO05D009434 1.6e-22 110.5 63 85.7
MCO14G094 Micromonas commoda HOM05D007406 ORTHO05D009434 2.2e-21 106.7 213 37.1
Psat0s3650g0120 Pisum sativum HOM05D007406 ORTHO05D009434 4.0e-18 95.9 59 78.0
Os03g0728600 Oryza sativa ssp. japonica HOM05D007406 ORTHO05D009434 2.4e-15 86.7 67 49.3
Sc15g0005340 Simmondsia chinensis HOM05D007406 ORTHO05D009434 3.8e-13 79.3 78 59.0
Cre10.g466400 Chlamydomonas reinhardtii HOM05D007406 ORTHO05D009434 1.9e-12 77.0 153 37.9
PRCOL_00000641 Prasinoderma coloniale HOM05D007406 ORTHO05D009434 5.6e-12 75.5 208 33.2
CDE04G2918 Ceratophyllum demersum HOM05D007406 ORTHO05D009434 2.0e-06 57.0 43 58.1


User provided reference genes

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