Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0225871 Helianthus annuus HOM05D006780 ORTHO05D008455 7.3e-144 513.8 252 100.0
Lsat_1_v5_gn_8_3841 Lactuca sativa HOM05D006780 ORTHO05D008455 2.2e-124 449.1 254 86.2
Lj3A891T47 Lonicera japonica HOM05D006780 ORTHO05D008455 7.1e-107 391.0 255 76.1
Nitab4.5_0007683g0020 Nicotiana tabacum HOM05D006780 ORTHO05D008455 1.8e-102 376.3 252 73.4
CSS0033689 Camellia sinensis var. sinensis HOM05D006780 ORTHO05D008455 2.4e-102 375.9 254 74.4
ECA233G5194 Erigeron canadensis HOM05D006780 ORTHO05D008455 5.3e-102 374.8 201 89.1
SalBow2G3389 Salvia bowleyana HOM05D006780 ORTHO05D008455 1.5e-101 373.2 257 73.5
Nitab4.5_0000011g0110 Nicotiana tabacum HOM05D006780 ORTHO05D008455 5.8e-101 371.3 252 73.0
Nn6g33682 Nelumbo nucifera HOM05D006780 ORTHO05D008455 1.9e-99 366.3 252 71.0
Cc02_g00520 Coffea canephora HOM05D006780 ORTHO05D008455 2.4e-99 365.9 254 71.7
Eucgr.K00108 Eucalyptus grandis HOM05D006780 ORTHO05D008455 9.3e-99 364.0 254 71.3
PGR142G1227 Punica granatum HOM05D006780 ORTHO05D008455 9.3e-99 364.0 255 70.6
MSTRG.17 Avicennia marina HOM05D006780 ORTHO05D008455 4.6e-98 361.7 254 70.1
Sopen07g001650 Solanum pennellii HOM05D006780 ORTHO05D008455 7.9e-98 360.9 252 70.2
Solyc07g005550.4 Solanum lycopersicum HOM05D006780 ORTHO05D008455 2.3e-97 359.4 252 70.2
Actinidia08727 Actinidia chinensis HOM05D006780 ORTHO05D008455 3.0e-97 359.0 254 70.9
CiPaw.08G043400 Carya illinoinensis HOM05D006780 ORTHO05D008455 3.9e-97 358.6 253 69.2
Hund14300 Selenicereus undatus HOM05D006780 ORTHO05D008455 8.7e-97 357.5 263 65.8
Dinv29183 Davidia involucrata HOM05D006780 ORTHO05D008455 1.5e-96 356.7 250 70.4
Actinidia34294 Actinidia chinensis HOM05D006780 ORTHO05D008455 3.3e-96 355.5 254 68.5
Cfa013613 Carpinus fangiana HOM05D006780 ORTHO05D008455 4.3e-96 355.1 252 69.8
Hma1.2p1_0115F.1_g055870 Hydrangea macrophylla HOM05D006780 ORTHO05D008455 7.4e-96 354.4 214 78.5
SGA_v2.0_scaffold165G38216 Striga asiatica HOM05D006780 ORTHO05D008455 1.3e-95 353.6 257 69.6
QL09p026712 Quercus lobata HOM05D006780 ORTHO05D008455 2.1e-95 352.8 255 69.4
Thecc.05G208000 Theobroma cacao HOM05D006780 ORTHO05D008455 4.8e-95 351.7 258 69.0
Migut.F00963 Erythranthe guttata HOM05D006780 ORTHO05D008455 1.8e-94 349.7 253 69.2
TAR636G2448 Trochodendron aralioides HOM05D006780 ORTHO05D008455 5.3e-94 348.2 252 69.0
COL.COLO4_34143 Corchorus olitorius HOM05D006780 ORTHO05D008455 2.0e-93 346.3 255 67.5
Gohir.A05G389500 Gossypium hirsutum HOM05D006780 ORTHO05D008455 3.4e-93 345.5 255 68.2
Gorai.012G029700 Gossypium raimondii HOM05D006780 ORTHO05D008455 3.4e-93 345.5 255 68.2
Atru.chr12.2100 Acer truncatum HOM05D006780 ORTHO05D008455 4.5e-93 345.1 252 69.8
vmacro06481 Vaccinium macrocarpon HOM05D006780 ORTHO05D008455 4.5e-93 345.1 279 65.2
Gohir.D04G027000 Gossypium hirsutum HOM05D006780 ORTHO05D008455 2.2e-92 342.8 255 67.5
TAR629G2389 Trochodendron aralioides HOM05D006780 ORTHO05D008455 4.9e-92 341.7 252 67.1
Ciclev10012613m.g Citrus clementina HOM05D006780 ORTHO05D008455 8.4e-92 340.9 252 66.3
Peaxi162Scf00542g00012 Petunia axillaris HOM05D006780 ORTHO05D008455 1.4e-91 340.1 259 67.2
Sabra04G0017100 Salix brachista HOM05D006780 ORTHO05D008455 1.9e-91 339.7 269 67.7
Sc07g0007970 Simmondsia chinensis HOM05D006780 ORTHO05D008455 5.5e-91 338.2 231 68.4
Hma1.2p1_0115F.1_g055860 Hydrangea macrophylla HOM05D006780 ORTHO05D008455 1.2e-90 337.0 253 68.4
Gorai.004G260300 Gossypium raimondii HOM05D006780 ORTHO05D008455 7.9e-90 334.3 244 68.4
Rhsim03G0219000 Rhododendron simsii HOM05D006780 ORTHO05D008455 1.0e-89 334.0 286 61.5
Gohir.1Z049572 Gossypium hirsutum HOM05D006780 ORTHO05D008455 1.3e-89 333.6 255 65.9
Manes.09G119100 Manihot esculenta HOM05D006780 ORTHO05D008455 1.8e-89 333.2 254 66.9
CANSAT21G1469 Cannabis sativa HOM05D006780 ORTHO05D008455 2.3e-89 332.8 269 62.8
vmacro10178 Vaccinium macrocarpon HOM05D006780 ORTHO05D008455 2.3e-89 332.8 296 60.1
PGSC0003DMG400011181 Solanum tuberosum HOM05D006780 ORTHO05D008455 5.1e-89 331.6 327 53.5
CAN.G160.70 Capsicum annuum HOM05D006780 ORTHO05D008455 8.7e-89 330.9 253 66.8
Potri.004G030100 Populus trichocarpa HOM05D006780 ORTHO05D008455 1.9e-88 329.7 270 65.2
RcHm_v2.0_Chr1g0383391 Rosa chinensis HOM05D006780 ORTHO05D008455 2.5e-88 329.3 220 72.7
GSVIVG01024468001 Vitis vinifera HOM05D006780 ORTHO05D008455 2.5e-88 329.3 216 73.6
Ah.12g058490 Amaranthus hybridus HOM05D006780 ORTHO05D008455 5.6e-88 328.2 257 65.4
Aqoxy3G02533 Aquilegia oxysepala HOM05D006780 ORTHO05D008455 2.8e-87 325.9 253 64.4
THA.LOC104805709 Tarenaya hassleriana HOM05D006780 ORTHO05D008455 3.7e-87 325.5 228 68.9
Gohir.A08G223700 Gossypium hirsutum HOM05D006780 ORTHO05D008455 6.2e-87 324.7 255 64.7
arahy.Tifrunner.gnm1.ann1.T66758 Arachis hypogaea HOM05D006780 ORTHO05D008455 1.1e-86 323.9 250 64.0
Aa31LG2G2290 Aethionema arabicum HOM05D006780 ORTHO05D008455 1.8e-86 323.2 224 68.8
arahy.Tifrunner.gnm1.ann1.T2A0GP Arachis hypogaea HOM05D006780 ORTHO05D008455 2.4e-86 322.8 250 63.6
FAN03G1919 Fragaria x ananassa HOM05D006780 ORTHO05D008455 3.1e-86 322.4 220 70.5
FAN10G0287 Fragaria x ananassa HOM05D006780 ORTHO05D008455 6.9e-86 321.2 220 70.5
AUR62030415 Chenopodium quinoa HOM05D006780 ORTHO05D008455 9.0e-86 320.9 237 65.8
FvH4_7g33420 Fragaria vesca HOM05D006780 ORTHO05D008455 1.5e-85 320.1 220 70.5
DCAR_008997 Daucus carota HOM05D006780 ORTHO05D008455 2.0e-85 319.7 253 64.8
FAN01G1241 Fragaria x ananassa HOM05D006780 ORTHO05D008455 2.0e-85 319.7 236 67.8
FAN10G2247 Fragaria x ananassa HOM05D006780 ORTHO05D008455 4.5e-85 318.5 220 70.0
AUR62010478 Chenopodium quinoa HOM05D006780 ORTHO05D008455 1.0e-84 317.4 246 64.2
MD01G1232400 Malus domestica HOM05D006780 ORTHO05D008455 1.7e-84 316.6 252 65.1
unitig_52.g16857 Utricularia gibba HOM05D006780 ORTHO05D008455 2.2e-84 316.2 216 69.4
Rhsim09G0211500 Rhododendron simsii HOM05D006780 ORTHO05D008455 4.9e-84 315.1 306 56.5
TWI34G0276 Tripterygium wilfordii HOM05D006780 ORTHO05D008455 8.4e-84 314.3 222 68.9
AT2G44870 Arabidopsis thaliana HOM05D006780 ORTHO05D008455 2.5e-83 312.8 248 63.3
ClCG01G004850 Citrullus lanatus HOM05D006780 ORTHO05D008455 4.2e-83 312.0 253 64.8
Sed0025589 Sechium edule HOM05D006780 ORTHO05D008455 9.3e-83 310.8 253 63.6
TWI60G0503 Tripterygium wilfordii HOM05D006780 ORTHO05D008455 9.3e-83 310.8 253 63.2
BraA02t06361Z Brassica rapa HOM05D006780 ORTHO05D008455 6.0e-82 308.1 240 65.4
CiPaw.07G182200 Carya illinoinensis HOM05D006780 ORTHO05D008455 6.0e-82 308.1 201 73.1
A02p13050 Brassica napus HOM05D006780 ORTHO05D008455 1.3e-81 307.0 240 65.0
Prupe.2G322900 Prunus persica HOM05D006780 ORTHO05D008455 1.8e-81 306.6 253 62.8
MELO3C005448.2 Cucumis melo HOM05D006780 ORTHO05D008455 5.1e-81 305.1 251 62.9
Thhalv10022468m.g Eutrema salsugineum HOM05D006780 ORTHO05D008455 5.1e-81 305.1 226 66.4
BcaC03g14678 Brassica carinata HOM05D006780 ORTHO05D008455 6.7e-81 304.7 240 64.6
BolC2t08258H Brassica oleracea HOM05D006780 ORTHO05D008455 6.7e-81 304.7 240 64.6
VMungo1127G1066 Vigna mungo HOM05D006780 ORTHO05D008455 1.1e-80 303.9 198 72.2
AL2G19830 Arabidopsis lyrata HOM05D006780 ORTHO05D008455 1.3e-79 300.4 247 61.9
MD07G1304300 Malus domestica HOM05D006780 ORTHO05D008455 1.3e-79 300.4 216 69.0
Lj3g0022672 Lotus japonicus HOM05D006780 ORTHO05D008455 1.6e-79 300.1 205 71.7
BcaB05g24083 Brassica carinata HOM05D006780 ORTHO05D008455 6.3e-79 298.1 251 60.6
C02p21190 Brassica napus HOM05D006780 ORTHO05D008455 6.3e-79 298.1 251 61.8
CsaV3_5G005070 Cucumis sativus L. HOM05D006780 ORTHO05D008455 8.2e-79 297.7 217 66.8
PSO063G3320 Papaver somniferum HOM05D006780 ORTHO05D008455 1.4e-78 297.0 276 56.2
Sp5g19750 Schrenkiella parvula HOM05D006780 ORTHO05D008455 1.4e-78 297.0 240 62.1
PSO782G3414 Papaver somniferum HOM05D006780 ORTHO05D008455 4.5e-77 292.0 221 63.8
Phvul.011G002600 Phaseolus vulgaris HOM05D006780 ORTHO05D008455 5.9e-77 291.6 223 63.2
CDE02G2736 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 7.7e-77 291.2 259 56.8
Carub.0002s1056 Capsella rubella HOM05D006780 ORTHO05D008455 8.5e-76 287.7 254 57.9
EL10Ac5g12581 Beta vulgaris HOM05D006780 ORTHO05D008455 1.9e-75 286.6 307 50.5
Glyma.12G002200 Glycine max HOM05D006780 ORTHO05D008455 3.2e-75 285.8 254 57.9
Medtr4g033475 Medicago truncatula HOM05D006780 ORTHO05D008455 1.2e-74 283.9 195 69.2
Ca_19681_v3 Cicer arietinum L. HOM05D006780 ORTHO05D008455 2.7e-74 282.7 196 69.4
CDE11G0765 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 7.9e-74 281.2 257 54.9
Dinv17273 Davidia involucrata HOM05D006780 ORTHO05D008455 1.0e-73 280.8 177 75.7
Psat7g145160 Pisum sativum HOM05D006780 ORTHO05D008455 2.3e-73 279.6 195 68.7
Glyma.09G234600 Glycine max HOM05D006780 ORTHO05D008455 3.0e-73 279.3 230 59.1
TPR.G31925 Trifolium pratense HOM05D006780 ORTHO05D008455 5.1e-73 278.5 195 68.2
CDE02G3388 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 1.3e-71 273.9 258 53.5
CARHR056600 Cardamine hirsuta HOM05D006780 ORTHO05D008455 5.9e-69 265.0 242 57.0
Duzib128G1164 Durio zibethinus HOM05D006780 ORTHO05D008455 8.5e-68 261.2 255 54.5
Duzib177G1050 Durio zibethinus HOM05D006780 ORTHO05D008455 8.8e-65 251.1 255 52.5
Zm00001eb024190 Zea mays HOM05D006780 ORTHO05D008455 7.4e-64 248.1 252 48.8
CDE11G0053 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 7.0e-62 241.5 252 49.6
ATR0829G223 Amborella trichopoda HOM05D006780 ORTHO05D008455 1.3e-60 237.3 194 59.3
HPP92_025668 Vanilla planifolia HOM05D006780 ORTHO05D008455 1.1e-59 234.2 255 49.4
Cpa.g.sc39.45 Carica papaya HOM05D006780 ORTHO05D008455 7.5e-40 168.3 151 54.3
SMO301G0031 Selaginella moellendorffii HOM05D006780 ORTHO05D008455 7.5e-40 168.3 187 43.9
Pp3c8_4270 Physcomitrium patens HOM05D006780 ORTHO05D008455 3.5e-37 159.5 209 39.2
CSS0031860 Camellia sinensis var. sinensis HOM05D001955 ORTHO05D001917 1.3e-28 131.0 110 62.7
Mapoly0133s0055 Marchantia polymorpha HOM05D006780 ORTHO05D008455 3.9e-28 129.4 153 39.2
CBR_g642 Chara braunii HOM05D006780 ORTHO05D008455 9.8e-24 114.8 195 34.9
Os10g0569000 Oryza sativa ssp. japonica HOM05D006780 ORTHO05D008455 9.8e-16 88.2 94 46.8


User provided reference genes

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