Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 1.6e-92 342.8 179 100.0
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 6.2e-65 251.1 186 73.1
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 3.7e-49 198.7 152 75.0
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 2.4e-48 196.1 157 71.3
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 2.6e-39 166.0 172 56.4
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 3.4e-39 165.6 129 69.0
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 2.2e-38 162.9 165 58.8
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 1.4e-37 160.2 210 50.0
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 1.9e-37 159.8 112 71.4
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 3.2e-37 159.1 150 62.0
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 1.2e-36 157.1 155 59.4
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 2.1e-36 156.4 130 65.4
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 2.1e-36 156.4 180 53.3
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 3.6e-36 155.6 162 56.2
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 6.1e-36 154.8 211 47.9
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 6.1e-36 154.8 187 51.3
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 1.0e-35 154.1 194 49.5
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 1.8e-35 153.3 170 54.7
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 3.0e-35 152.5 169 53.8
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 6.7e-35 151.4 183 53.0
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 6.7e-35 151.4 195 50.3
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 1.5e-34 150.2 192 49.0
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 1.5e-34 150.2 182 51.6
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 1.5e-34 150.2 138 60.9
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 1.5e-34 150.2 111 69.4
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 2.0e-34 149.8 189 51.3
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 2.6e-34 149.4 148 56.8
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 4.4e-34 148.7 205 48.8
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 4.4e-34 148.7 147 57.1
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 5.7e-34 148.3 100 73.0
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 5.7e-34 148.3 182 51.1
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 5.7e-34 148.3 102 71.6
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 7.4e-34 147.9 111 66.7
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 9.7e-34 147.5 102 71.6
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 9.7e-34 147.5 102 71.6
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 9.7e-34 147.5 163 52.1
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 1.3e-33 147.1 159 54.1
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 1.7e-33 146.7 194 49.5
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 1.7e-33 146.7 102 70.6
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 1.7e-33 146.7 189 51.9
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 2.2e-33 146.4 159 51.6
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 2.8e-33 146.0 181 48.6
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 3.7e-33 145.6 104 69.2
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 3.7e-33 145.6 164 48.8
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 3.7e-33 145.6 182 51.1
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 6.3e-33 144.8 186 50.0
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 6.3e-33 144.8 111 64.9
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 8.2e-33 144.4 166 50.6
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 8.2e-33 144.4 166 50.6
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.1e-32 144.1 166 49.4
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.1e-32 144.1 166 49.4
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 1.4e-32 143.7 177 50.3
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 1.4e-32 143.7 177 50.3
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 1.4e-32 143.7 177 50.3
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 1.4e-32 143.7 185 48.6
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 1.8e-32 143.3 157 51.6
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 4.1e-32 142.1 134 58.2
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 5.3e-32 141.7 172 48.3
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 7.0e-32 141.4 191 46.6
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 7.0e-32 141.4 138 57.2
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 7.0e-32 141.4 173 50.3
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 7.0e-32 141.4 163 51.5
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 1.2e-31 140.6 156 53.8
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.2e-31 140.6 161 50.3
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.2e-31 140.6 166 48.2
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 1.2e-31 140.6 187 48.1
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 1.5e-31 140.2 183 49.7
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 2.6e-31 139.4 166 50.0
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 7.7e-31 137.9 166 47.6
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 1.0e-30 137.5 178 49.4
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 6.5e-30 134.8 182 47.8
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 1.5e-29 133.7 146 51.4
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 1.9e-29 133.3 116 61.2
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 1.9e-29 133.3 166 49.4
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 3.2e-29 132.5 189 47.6
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 5.5e-29 131.7 130 53.8
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 7.2e-29 131.3 204 45.6
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 2.1e-28 129.8 180 44.4
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 1.0e-27 127.5 110 56.4
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 1.8e-27 126.7 110 56.4
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 5.2e-27 125.2 100 62.0
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 5.2e-27 125.2 173 45.7
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 1.1e-26 124.0 176 44.3
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 1.5e-26 123.6 164 44.5
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 1.5e-26 123.6 103 57.3
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 3.3e-26 122.5 171 46.2
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 9.7e-26 120.9 176 44.9
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 3.1e-24 115.9 87 65.5
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 3.1e-24 115.9 178 42.1
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 4.5e-23 112.1 149 46.3
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 5.0e-22 108.6 102 56.9
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 1.6e-20 103.6 72 68.1
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 1.7e-17 93.6 174 39.1
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 5.4e-16 88.6 129 43.4
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 5.4e-16 88.6 129 43.4
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 1.2e-15 87.4 194 38.1
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 2.0e-15 86.7 135 40.7
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 5.9e-15 85.1 115 44.3
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 1.2e-12 77.4 47 74.5
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 2.3e-11 73.2 175 34.9
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 5.2e-11 72.0 137 41.6
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 6.8e-11 71.6 92 48.9
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 8.8e-11 71.2 124 45.2
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 2.0e-10 70.1 129 37.2
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 4.4e-10 68.9 60 55.0
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 1.7e-09 67.0 62 53.2
Prupe.2G280700 Prunus persica HOM05D007220 ORTHO05D009058 1.6e-07 60.5 132 34.8
Ah.07g208070 Amaranthus hybridus HOM05D000130 ORTHO05D009058 5.0e-06 55.5 40 67.5


User provided reference genes

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