Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0222581 Helianthus annuus HOM05D007229 ORTHO05D009131 1.7e-94 349.4 182 100.0
Lsat_1_v5_gn_8_13541 Lactuca sativa HOM05D007229 ORTHO05D009131 4.1e-72 275.0 180 78.9
ECA233G6234 Erigeron canadensis HOM05D007229 ORTHO05D009131 6.8e-67 257.7 183 71.6
Hma1.2p1_2086F.1_g313730 Hydrangea macrophylla HOM05D007229 ORTHO05D009131 1.3e-62 243.4 184 68.5
Haze_17350 Corylus avellana HOM05D000154 ORTHO05D000092 1.7e-62 243.0 184 67.9
Lj1A965T45 Lonicera japonica HOM05D007229 ORTHO05D009131 1.2e-60 236.9 186 69.9
FvH4_7g25840 Fragaria vesca HOM05D007229 ORTHO05D009131 1.8e-59 233.0 184 69.6
FAN06G3440 Fragaria x ananassa HOM05D007229 ORTHO05D009131 1.8e-59 233.0 184 69.6
RcHm_v2.0_Chr1g0372111 Rosa chinensis HOM05D007229 ORTHO05D009131 3.0e-59 232.3 184 71.7
Lalb_Chr11g0067841 Lupinus albus HOM05D007229 ORTHO05D009131 1.2e-58 230.3 180 67.2
Glyma.04G221700 Glycine max HOM05D007229 ORTHO05D009131 3.4e-58 228.8 180 66.7
Prupe.2G263300 Prunus persica HOM05D007229 ORTHO05D009131 3.4e-58 228.8 182 70.3
GSVIVG01032702001 Vitis vinifera HOM05D007229 ORTHO05D009131 2.9e-57 225.7 183 65.0
Glyma.06G143700 Glycine max HOM05D007229 ORTHO05D009131 4.9e-57 224.9 183 65.6
Dinv26059 Davidia involucrata HOM05D007229 ORTHO05D009131 6.4e-57 224.6 185 63.2
Lj1g0022940 Lotus japonicus HOM05D007229 ORTHO05D009131 8.3e-57 224.2 180 66.1
MD07G1232800 Malus domestica HOM05D007229 ORTHO05D009131 1.1e-56 223.8 186 64.5
arahy.Tifrunner.gnm1.ann1.B9ILCP Arachis hypogaea HOM05D007229 ORTHO05D009131 1.4e-56 223.4 183 65.0
Rhsim09G0184500 Rhododendron simsii HOM05D007229 ORTHO05D009131 1.4e-56 223.4 185 65.4
VMungo1309G1820 Vigna mungo HOM05D007229 ORTHO05D009131 1.4e-56 223.4 182 64.8
arahy.Tifrunner.gnm1.ann1.I1HNZH Arachis hypogaea HOM05D007229 ORTHO05D009131 1.8e-56 223.0 182 64.3
Potri.019G056400 Populus trichocarpa HOM05D007229 ORTHO05D009131 2.4e-56 222.6 181 63.5
Sc14g0005610 Simmondsia chinensis HOM05D007229 ORTHO05D009131 2.4e-56 222.6 184 66.3
Cc02_g05510 Coffea canephora HOM05D007229 ORTHO05D009131 3.2e-56 222.2 182 61.5
TAR369G0442 Trochodendron aralioides HOM05D007229 ORTHO05D009131 4.1e-56 221.9 181 63.5
COL.COLO4_19452 Corchorus olitorius HOM05D007229 ORTHO05D009131 5.4e-56 221.5 186 62.4
Medtr3g094080 Medicago truncatula HOM05D007229 ORTHO05D009131 5.4e-56 221.5 180 63.9
TPR.G16113 Trifolium pratense HOM05D007229 ORTHO05D009131 5.4e-56 221.5 181 65.7
Sopen06g015630 Solanum pennellii HOM05D007229 ORTHO05D009131 7.0e-56 221.1 183 64.5
PGSC0003DMG400024310 Solanum tuberosum HOM05D007229 ORTHO05D009131 9.2e-56 220.7 182 63.2
PSO339G1638 Papaver somniferum HOM05D007229 ORTHO05D009131 1.2e-55 220.3 169 67.5
PGR044G2361 Punica granatum HOM05D007229 ORTHO05D009131 1.2e-55 220.3 180 64.4
Gohir.A05G403900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 2.7e-55 219.2 181 63.5
Ciclev10033477m.g Citrus clementina HOM05D007229 ORTHO05D009131 3.5e-55 218.8 180 63.9
Gohir.D04G011900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 3.5e-55 218.8 181 63.5
Manes.07G139500 Manihot esculenta HOM05D007229 ORTHO05D009131 4.6e-55 218.4 182 63.7
PSO384G2154 Papaver somniferum HOM05D007229 ORTHO05D009131 5.9e-55 218.0 169 66.9
Oeu020108.1 Olea europaea HOM05D007229 ORTHO05D009131 7.8e-55 217.6 185 61.1
Gorai.012G014100 Gossypium raimondii HOM05D007229 ORTHO05D009131 1.3e-54 216.9 181 63.0
Psat5g069080 Pisum sativum HOM05D007229 ORTHO05D009131 1.3e-54 216.9 180 65.0
Thecc.10G183800 Theobroma cacao HOM05D007229 ORTHO05D009131 3.0e-54 215.7 180 63.9
Actinidia00993 Actinidia chinensis HOM05D007229 ORTHO05D009131 3.9e-54 215.3 179 63.7
Manes.10G004800 Manihot esculenta HOM05D007229 ORTHO05D009131 3.9e-54 215.3 194 59.8
QL08p064765 Quercus lobata HOM05D007229 ORTHO05D009131 3.9e-54 215.3 183 61.7
Hund13463 Selenicereus undatus HOM05D007229 ORTHO05D009131 5.0e-54 214.9 184 64.7
Peaxi162Scf00739g00125 Petunia axillaris HOM05D000154 ORTHO05D000092 6.6e-54 214.5 186 63.4
Solyc06g050170.4 Solanum lycopersicum HOM05D000154 ORTHO05D000092 6.6e-54 214.5 182 64.8
TWI53G0143 Tripterygium wilfordii HOM05D007229 ORTHO05D009131 6.6e-54 214.5 179 60.9
Phvul.009G142501 Phaseolus vulgaris HOM05D007229 ORTHO05D009131 8.6e-54 214.2 180 62.8
Migut.F00594 Erythranthe guttata HOM05D007229 ORTHO05D009131 1.5e-53 213.4 121 83.5
DCAR_019811 Daucus carota HOM05D007229 ORTHO05D009131 3.3e-53 212.2 123 84.6
Duzib114G0482 Durio zibethinus HOM05D007229 ORTHO05D009131 1.2e-52 210.3 180 59.4
CDE12G0285 Ceratophyllum demersum HOM05D007229 ORTHO05D009131 2.1e-52 209.5 122 82.0
Sabra19G0072100 Salix brachista HOM05D007229 ORTHO05D009131 2.1e-52 209.5 185 62.2
MSTRG.27273 Avicennia marina HOM05D007229 ORTHO05D009131 4.7e-52 208.4 180 61.7
Cpa.g.sc19.82 Carica papaya HOM05D007229 ORTHO05D009131 1.0e-51 207.2 121 79.3
SalBow3G2298 Salvia bowleyana HOM05D007229 ORTHO05D009131 1.4e-51 206.8 122 81.1
CAN.G55.3 Capsicum annuum HOM05D007229 ORTHO05D009131 6.8e-51 204.5 118 80.5
SGA_v2.0_scaffold60G20901 Striga asiatica HOM05D007229 ORTHO05D009131 6.8e-51 204.5 124 78.2
MBI15_g35108_MAGBIO Magnolia biondii HOM05D007229 ORTHO05D009131 8.9e-51 204.1 142 71.1
CSS0032880 Camellia sinensis var. sinensis HOM05D007229 ORTHO05D009131 1.2e-50 203.8 184 60.9
EL10Ac2g04250 Beta vulgaris HOM05D007229 ORTHO05D009131 4.4e-50 201.8 202 55.0
CiPaw.01G306000 Carya illinoinensis HOM05D007229 ORTHO05D009131 5.8e-50 201.4 187 59.9
AUR62012362 Chenopodium quinoa HOM05D007229 ORTHO05D009131 3.7e-49 198.7 118 80.5
A09p49260 Brassica napus HOM05D007229 ORTHO05D009131 4.9e-49 198.4 181 59.1
BraA09t40379Z Brassica rapa HOM05D007229 ORTHO05D009131 4.9e-49 198.4 181 59.1
BcaC07g39946 Brassica carinata HOM05D007229 ORTHO05D009131 1.9e-48 196.4 182 58.2
C08p31620 Brassica napus HOM05D007229 ORTHO05D009131 1.9e-48 196.4 182 58.2
BolC8t50783H Brassica oleracea HOM05D007229 ORTHO05D009131 1.9e-48 196.4 182 58.2
MELO3C020131.2 Cucumis melo HOM05D007229 ORTHO05D009131 1.9e-48 196.4 123 74.8
BcaB01g00004 Brassica carinata HOM05D007229 ORTHO05D009131 2.4e-48 196.1 181 59.1
BcaB01g00005 Brassica carinata HOM05D007229 ORTHO05D009131 2.4e-48 196.1 181 59.1
SEGI_31216 Sequoiadendron giganteum HOM05D007229 ORTHO05D009131 2.4e-48 196.1 147 65.3
CsaV3_5G010830 Cucumis sativus L. HOM05D007229 ORTHO05D009131 3.2e-48 195.7 123 74.8
AT3G56290 Arabidopsis thaliana HOM05D007229 ORTHO05D009131 7.0e-48 194.5 180 55.6
Sed0026302 Sechium edule HOM05D007229 ORTHO05D009131 9.2e-48 194.1 119 75.6
Aqoxy2G00722 Aquilegia oxysepala HOM05D007229 ORTHO05D009131 1.2e-47 193.7 131 72.5
ClCG07G004950 Citrullus lanatus HOM05D007229 ORTHO05D009131 1.6e-47 193.4 145 65.5
Duzib106G0259 Durio zibethinus HOM05D007229 ORTHO05D009131 1.6e-47 193.4 141 66.7
Sp5g06210 Schrenkiella parvula HOM05D007229 ORTHO05D009131 1.6e-47 193.4 183 56.8
C06p23470 Brassica napus HOM05D007229 ORTHO05D009131 2.7e-47 192.6 185 58.4
BcaC08g44777 Brassica carinata HOM05D007229 ORTHO05D009131 3.5e-47 192.2 182 58.2
A07p22880 Brassica napus HOM05D007229 ORTHO05D009131 3.5e-47 192.2 182 58.2
BraA07t29954Z Brassica rapa HOM05D007229 ORTHO05D009131 3.5e-47 192.2 182 58.2
CARHR166450 Cardamine hirsuta HOM05D007229 ORTHO05D009131 3.5e-47 192.2 183 56.8
AUR62031491 Chenopodium quinoa HOM05D000154 ORTHO05D000092 3.5e-47 192.2 112 81.2
BolC6t37520H Brassica oleracea HOM05D007229 ORTHO05D009131 4.6e-47 191.8 182 58.2
THA.LOC104824356 Tarenaya hassleriana HOM05D007229 ORTHO05D009131 4.6e-47 191.8 119 76.5
Os01g0823600 Oryza sativa ssp. japonica HOM05D007229 ORTHO05D009131 1.3e-46 190.3 122 72.1
HPP92_017919 Vanilla planifolia HOM05D007229 ORTHO05D009131 1.7e-46 189.9 119 71.4
Thhalv10006268m.g Eutrema salsugineum HOM05D007229 ORTHO05D009131 3.9e-46 188.7 182 61.0
Aa31LG10G11190 Aethionema arabicum HOM05D007229 ORTHO05D009131 6.6e-46 188.0 184 58.2
AL5G37620 Arabidopsis lyrata HOM05D007229 ORTHO05D009131 1.5e-45 186.8 181 59.1
Carub.0005s2307 Capsella rubella HOM05D007229 ORTHO05D009131 2.5e-45 186.0 147 63.9
Pp3c19_14460 Physcomitrium patens HOM05D007229 ORTHO05D009131 2.5e-45 186.0 117 72.6
Mapoly0032s0114 Marchantia polymorpha HOM05D007229 ORTHO05D009131 5.2e-43 178.3 116 69.8
BcaB02g07659 Brassica carinata HOM05D007229 ORTHO05D009131 8.9e-43 177.6 187 55.6
SMO230G0076 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 7.1e-40 167.9 121 66.1
vmacro09972 Vaccinium macrocarpon HOM05D007229 ORTHO05D009131 7.1e-40 167.9 185 49.7
ATR0681G125 Amborella trichopoda HOM05D007229 ORTHO05D009131 6.0e-39 164.9 100 76.0
Nitab4.5_0003695g0030 Nicotiana tabacum HOM05D007229 ORTHO05D009131 1.7e-38 163.3 185 51.9
Nitab4.5_0000109g0540 Nicotiana tabacum HOM05D000154 ORTHO05D009131 3.3e-37 159.1 143 57.3
SMO230G0102 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 5.4e-32 141.7 101 67.3
SMO230G0113 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 5.4e-32 141.7 101 67.3
Ah.10g035980 Amaranthus hybridus HOM05D007229 ORTHO05D009131 4.4e-26 122.1 179 43.0
Sed0009884 Sechium edule HOM05D007229 ORTHO05D009131 4.9e-25 118.6 123 52.0
SabraUnG0004000 Salix brachista HOM05D007229 ORTHO05D009131 2.1e-23 113.2 129 54.3
MD01G1165900 Malus domestica HOM05D000154 ORTHO05D000092 3.0e-22 109.4 58 82.8
FAN01G1364 Fragaria x ananassa HOM05D007229 ORTHO05D009131 1.5e-21 107.1 118 58.5
Nn2g10342 Nelumbo nucifera HOM05D000154 ORTHO05D000092 2.5e-21 106.3 67 71.6
AagrBONN_evm.TU.Sc2ySwM_344.3614 Anthoceros agrestis HOM05D007229 ORTHO05D009131 2.4e-19 99.8 87 59.8
Zm00001eb149430 Zea mays HOM05D007229 ORTHO05D009131 4.5e-18 95.5 64 71.9
Eucgr.J00129 Eucalyptus grandis HOM05D007229 ORTHO05D009131 7.1e-08 61.6 94 43.6


User provided reference genes

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