Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0221951 Helianthus annuus HOM05D006653 ORTHO05D008346 1.1e-95 353.2 172 100.0
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 6.7e-48 194.5 180 58.9
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 1.8e-45 186.4 179 54.2
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 6.9e-37 157.9 156 51.3
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 5.8e-36 154.8 155 50.3
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 1.1e-34 150.6 172 47.1
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 1.3e-32 143.7 167 45.5
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 2.5e-31 139.4 166 44.0
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 4.3e-31 138.7 170 44.7
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 5.7e-31 138.3 170 44.7
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 9.7e-31 137.5 166 43.4
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 1.6e-30 136.7 171 45.6
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 2.2e-30 136.3 173 46.2
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 3.7e-30 135.6 174 44.8
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 6.3e-30 134.8 181 43.1
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 6.3e-30 134.8 181 43.1
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 1.4e-29 133.7 158 43.7
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 5.3e-29 131.7 168 45.2
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 5.3e-29 131.7 176 42.0
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 5.3e-29 131.7 168 42.3
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 1.2e-28 130.6 166 41.0
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 1.2e-28 130.6 170 41.8
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 1.5e-28 130.2 170 42.4
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 1.5e-28 130.2 171 40.9
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 1.5e-28 130.2 165 41.2
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 2.0e-28 129.8 152 47.4
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 2.6e-28 129.4 134 48.5
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 4.5e-28 128.6 170 40.0
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 4.5e-28 128.6 191 39.3
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 5.9e-28 128.3 168 42.3
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 1.3e-27 127.1 158 41.8
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 1.7e-27 126.7 167 43.1
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 2.2e-27 126.3 165 40.0
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 2.2e-27 126.3 173 42.2
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 2.9e-27 125.9 151 46.4
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 3.8e-27 125.6 167 42.5
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 3.8e-27 125.6 208 35.6
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 5.0e-27 125.2 179 41.3
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 6.5e-27 124.8 197 37.1
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 6.5e-27 124.8 167 41.9
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 1.1e-26 124.0 175 37.1
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 1.1e-26 124.0 175 39.4
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.4e-26 123.6 170 42.4
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 1.4e-26 123.6 170 41.2
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 1.4e-26 123.6 167 41.9
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 2.5e-26 122.9 170 40.0
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 3.2e-26 122.5 171 38.6
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 4.2e-26 122.1 145 43.4
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 4.2e-26 122.1 165 42.4
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 5.5e-26 121.7 152 42.8
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 5.5e-26 121.7 171 40.4
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 5.5e-26 121.7 171 38.6
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 5.5e-26 121.7 187 40.6
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 9.3e-26 120.9 167 39.5
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 9.3e-26 120.9 167 39.5
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 1.2e-25 120.6 174 41.4
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 2.7e-25 119.4 174 40.8
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 2.7e-25 119.4 150 40.7
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 3.6e-25 119.0 167 38.9
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 4.6e-25 118.6 171 38.6
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 6.1e-25 118.2 170 40.0
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 6.1e-25 118.2 165 38.8
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 6.1e-25 118.2 177 41.8
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 1.3e-24 117.1 145 42.8
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 1.3e-24 117.1 155 41.3
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 1.8e-24 116.7 169 40.8
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 1.8e-24 116.7 173 37.6
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 1.8e-24 116.7 163 39.9
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 1.8e-24 116.7 170 38.2
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 3.0e-24 115.9 165 41.8
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 3.9e-24 115.5 170 39.4
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 5.1e-24 115.2 163 41.1
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 5.1e-24 115.2 152 41.4
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 3.3e-23 112.5 170 37.6
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 4.3e-23 112.1 152 40.1
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 5.7e-23 111.7 143 39.9
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 5.7e-23 111.7 170 38.8
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 9.7e-23 110.9 116 49.1
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 9.7e-23 110.9 153 39.9
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 1.3e-22 110.5 165 39.4
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 2.2e-22 109.8 152 38.8
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 2.2e-22 109.8 152 38.8
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 2.2e-22 109.8 218 35.3
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 3.7e-22 109.0 148 39.2
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 6.3e-22 108.2 151 39.7
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 8.2e-22 107.8 172 39.0
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 2.9e-19 99.4 151 37.1
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 3.8e-19 99.0 109 44.0
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 8.5e-19 97.8 165 37.0
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 3.2e-18 95.9 110 47.3
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 3.2e-18 95.9 211 30.3
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 2.3e-16 89.7 99 45.5
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 2.0e-15 86.7 95 47.4
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 7.4e-15 84.7 156 32.7
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 7.4e-15 84.7 155 33.5
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 9.7e-15 84.3 175 34.3
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 1.3e-14 84.0 95 46.3
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 3.7e-14 82.4 90 46.7
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 6.3e-14 81.6 90 46.7
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 8.2e-14 81.3 90 45.6
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 1.8e-13 80.1 169 32.5
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 3.1e-13 79.3 94 44.7
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 2.0e-12 76.6 161 32.9
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 2.0e-12 76.6 85 45.9
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 3.4e-12 75.9 149 33.6
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 5.9e-12 75.1 176 33.0
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 7.7e-12 74.7 166 27.1
Lsat_1_v5_gn_5_133280 Lactuca sativa HOM05D005717 ORTHO05D007221 2.9e-11 72.8 58 60.3
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 3.8e-11 72.4 95 44.2
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 2.5e-10 69.7 90 45.6
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 2.5e-10 69.7 83 45.8
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 3.6e-09 65.9 81 44.4
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 1.3e-06 57.4 219 24.2


User provided reference genes

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