Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0221301 Helianthus annuus HOM05D001128 ORTHO05D000721 2.0e-143 512.3 242 100.0
Lsat_1_v5_gn_8_14501 Lactuca sativa HOM05D001128 ORTHO05D000721 1.4e-38 164.1 316 42.7
HanXRQChr12g0369451 Helianthus annuus HOM05D001128 ORTHO05D000721 2.0e-29 133.7 282 41.8
Lsat_1_v5_gn_2_116981 Lactuca sativa HOM05D001128 ORTHO05D000721 1.2e-23 114.4 282 33.3
HanXRQChr14g0458491 Helianthus annuus HOM05D001128 ORTHO05D000721 6.3e-12 75.5 283 29.7
Dinv34448 Davidia involucrata HOM05D001128 ORTHO05D000721 1.8e-11 73.9 272 29.4
Sabra08G0045800 Salix brachista HOM05D001128 ORTHO05D000721 2.7e-10 70.1 296 28.0
Nitab4.5_0000243g0040 Nicotiana tabacum HOM05D001128 ORTHO05D000721 4.5e-10 69.3 298 27.9
Potri.008G062200 Populus trichocarpa HOM05D001128 ORTHO05D000721 7.7e-10 68.6 120 39.2
vmacro07011 Vaccinium macrocarpon HOM05D001128 ORTHO05D000721 7.7e-10 68.6 147 36.7
Gohir.D04G065500 Gossypium hirsutum HOM05D001128 ORTHO05D000721 1.0e-09 68.2 250 28.0
Lj1A945T19 Lonicera japonica HOM05D001128 ORTHO05D000721 1.0e-09 68.2 161 37.3
Actinidia02898 Actinidia chinensis HOM05D001128 ORTHO05D000721 1.3e-09 67.8 163 35.6
Phvul.001G238700 Phaseolus vulgaris HOM05D001128 ORTHO05D000721 1.7e-09 67.4 265 28.7
Potri.010G195800 Populus trichocarpa HOM05D001128 ORTHO05D000721 1.7e-09 67.4 298 27.2
COL.COLO4_25581 Corchorus olitorius HOM05D001128 ORTHO05D000721 2.3e-09 67.0 290 26.9
Gohir.A05G346700 Gossypium hirsutum HOM05D001128 ORTHO05D000721 2.3e-09 67.0 250 27.6
Prupe.2G243200 Prunus persica HOM05D001128 ORTHO05D000721 2.3e-09 67.0 207 28.5
Manes.07G123000 Manihot esculenta HOM05D001128 ORTHO05D000721 2.9e-09 66.6 307 28.3
Glyma.14G063900 Glycine max HOM05D001128 ORTHO05D000721 3.8e-09 66.2 283 25.4
FvH4_7g23630 Fragaria vesca HOM05D001128 ORTHO05D000721 5.0e-09 65.9 278 28.8
Gorai.012G073700 Gossypium raimondii HOM05D001128 ORTHO05D000721 5.0e-09 65.9 250 27.6
HanXRQChr07g0202001 Helianthus annuus HOM05D001128 ORTHO05D000721 8.6e-09 65.1 241 26.6
Thecc.10G030500 Theobroma cacao HOM05D001128 ORTHO05D000721 1.9e-08 63.9 117 40.2
ClCG07G003770 Citrullus lanatus HOM05D001128 ORTHO05D000721 2.5e-08 63.5 257 25.7
Ciclev10031729m.g Citrus clementina HOM05D001128 ORTHO05D000721 2.5e-08 63.5 155 31.6
Cc02_g07190 Coffea canephora HOM05D001128 ORTHO05D000721 2.5e-08 63.5 122 33.6
MSTRG.27358 Avicennia marina HOM05D001128 ORTHO05D000721 3.3e-08 63.2 318 26.7
Lj3C959G13 Lonicera japonica HOM05D001128 ORTHO05D000721 3.3e-08 63.2 252 29.0
Lalb_Chr18g0052901 Lupinus albus HOM05D001128 ORTHO05D000721 4.3e-08 62.8 265 27.2
Nitab4.5_0002822g0050 Nicotiana tabacum HOM05D001128 ORTHO05D000721 5.6e-08 62.4 156 33.3
Rhsim03G0138400 Rhododendron simsii HOM05D001128 ORTHO05D000721 5.6e-08 62.4 157 35.0
RcHm_v2.0_Chr1g0368901 Rosa chinensis HOM05D001128 ORTHO05D000721 7.3e-08 62.0 294 27.6
GSVIVG01016431001 Vitis vinifera HOM05D001128 ORTHO05D000721 7.3e-08 62.0 117 36.8
MELO3C026566.2 Cucumis melo HOM05D001128 ORTHO05D000721 9.5e-08 61.6 267 25.8
ECA238G0704 Erigeron canadensis HOM05D001128 ORTHO05D000721 9.5e-08 61.6 242 27.3
Lj6g0007644 Lotus japonicus HOM05D001128 ORTHO05D000721 9.5e-08 61.6 265 29.1
Actinidia13898 Actinidia chinensis HOM05D001128 ORTHO05D000721 1.2e-07 61.2 148 33.1
SalBow6G4034 Salvia bowleyana HOM05D001128 ORTHO05D000721 1.6e-07 60.8 341 24.3
CSS0013156 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 2.1e-07 60.5 113 37.2
CSS0030928 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 2.1e-07 60.5 113 37.2
Actinidia02379 Actinidia chinensis HOM05D001128 ORTHO05D000721 2.8e-07 60.1 144 35.4
CANSAT56G3374 Cannabis sativa HOM05D001128 ORTHO05D000721 2.8e-07 60.1 112 39.3
Ca_17132_v3 Cicer arietinum L. HOM05D001128 ORTHO05D000721 2.8e-07 60.1 251 26.3
QL08p062120 Quercus lobata HOM05D001128 ORTHO05D000721 2.8e-07 60.1 154 33.8
vmacro20201 Vaccinium macrocarpon HOM05D001128 ORTHO05D000721 2.8e-07 60.1 237 25.7
Dinv37107 Davidia involucrata HOM05D001128 ORTHO05D000721 3.6e-07 59.7 147 34.0
Sabra10G0150300 Salix brachista HOM05D001128 ORTHO05D000721 4.7e-07 59.3 298 25.2
Manes.10G020800 Manihot esculenta HOM05D001128 ORTHO05D000721 8.0e-07 58.5 157 33.8
Hma1.2p1_0026F.1_g016650 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 1.0e-06 58.2 119 31.9
Phvul.008G113400 Phaseolus vulgaris HOM05D001128 ORTHO05D000721 1.0e-06 58.2 218 29.4
CsaV3_5G008580 Cucumis sativus L. HOM05D001128 ORTHO05D000721 1.4e-06 57.8 267 25.8
Dinv16282 Davidia involucrata HOM05D001128 ORTHO05D000721 1.8e-06 57.4 150 32.0
TPR.G11407 Trifolium pratense HOM05D001128 ORTHO05D000721 1.8e-06 57.4 239 29.3
Actinidia13814 Actinidia chinensis HOM05D001128 ORTHO05D000721 2.3e-06 57.0 294 25.5
Cc06_g02010 Coffea canephora HOM05D001128 ORTHO05D000721 2.3e-06 57.0 122 32.8
Cpa.g.sc19.247 Carica papaya HOM05D001128 ORTHO05D000721 3.0e-06 56.6 122 34.4
Duzib106G0526 Durio zibethinus HOM05D001128 ORTHO05D000721 3.0e-06 56.6 113 36.3
Duzib114G0703 Durio zibethinus HOM05D001128 ORTHO05D000721 4.0e-06 56.2 156 32.7
THA.LOC104824295 Tarenaya hassleriana HOM05D001128 ORTHO05D000721 5.2e-06 55.8 295 27.1
VMungo1383G1773 Vigna mungo HOM05D001128 ORTHO05D000721 5.2e-06 55.8 215 28.8
CSS0047983 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 6.8e-06 55.5 83 43.4
Duzib128G2050 Durio zibethinus HOM05D001128 ORTHO05D000721 6.8e-06 55.5 158 33.5
Glyma.11G225400 Glycine max HOM05D001128 ORTHO05D000721 6.8e-06 55.5 262 24.8
Potri.016G105000 Populus trichocarpa HOM05D001128 ORTHO05D000721 6.8e-06 55.5 113 38.1
Ca_07581_v3 Cicer arietinum L. HOM05D001128 ORTHO05D000721 8.9e-06 55.1 189 34.4


User provided reference genes

Program Settings