Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0220701 Helianthus annuus HOM05D000448 ORTHO05D000291 1.6e-80 302.8 155 100.0
Lsat_1_v5_gn_5_30860 Lactuca sativa HOM05D000448 ORTHO05D000291 3.3e-54 215.3 152 71.1
HanXRQChr16g0523061 Helianthus annuus HOM05D000448 ORTHO05D000291 6.0e-48 194.5 151 70.2
HanXRQChr16g0523051 Helianthus annuus HOM05D000448 ORTHO05D000291 1.0e-47 193.7 150 67.3
HanXRQChr16g0523041 Helianthus annuus HOM05D000448 ORTHO05D000291 2.2e-42 176.0 154 61.7
Lsat_1_v5_gn_5_31161 Lactuca sativa HOM05D000448 ORTHO05D000291 6.4e-34 147.9 100 74.0
ECA248G1701 Erigeron canadensis HOM05D000448 ORTHO05D000291 1.3e-29 133.7 136 50.0
HanXRQChr02g0058091 Helianthus annuus HOM05D000448 ORTHO05D000291 1.4e-28 130.2 147 49.0
Lsat_1_v5_gn_5_29481 Lactuca sativa HOM05D000448 ORTHO05D000291 2.5e-25 119.4 135 45.2
Lsat_1_v5_gn_5_29501 Lactuca sativa HOM05D000448 ORTHO05D000291 1.6e-24 116.7 135 46.7
ECA248G3007 Erigeron canadensis HOM05D000448 ORTHO05D000291 1.0e-23 114.0 136 44.9
Lsat_1_v5_gn_5_30600 Lactuca sativa HOM05D000448 ORTHO05D000291 1.8e-15 86.7 111 40.5
CiPaw.03G111300 Carya illinoinensis HOM05D000448 ORTHO05D000291 1.1e-12 77.4 161 31.1
VMungo0647G0051 Vigna mungo HOM05D000448 ORTHO05D000291 1.8e-12 76.6 147 29.9
Nn3g19311 Nelumbo nucifera HOM05D000448 ORTHO05D000291 2.4e-12 76.3 168 33.3
Prupe.3G154900 Prunus persica HOM05D000448 ORTHO05D000291 4.1e-12 75.5 166 30.7
Prupe.3G155300 Prunus persica HOM05D000264 ORTHO05D000152 9.0e-12 74.3 153 31.4
Dinv37880 Davidia involucrata HOM05D001203 ORTHO05D001059 5.9e-11 71.6 172 29.1
Glyma.07G035800 Glycine max HOM05D000448 ORTHO05D000291 5.9e-11 71.6 166 28.3
Glyma.16G006300 Glycine max HOM05D000448 ORTHO05D000291 7.7e-11 71.2 152 28.3
Lj1g0011572 Lotus japonicus HOM05D000448 ORTHO05D000291 7.7e-11 71.2 143 37.1
Glyma.13G130300 Glycine max HOM05D000448 ORTHO05D000291 1.3e-10 70.5 143 35.0
Lj1g0015920 Lotus japonicus HOM05D000448 ORTHO05D000291 1.3e-10 70.5 149 31.5
MD15G1053400 Malus domestica HOM05D000448 ORTHO05D000291 2.9e-10 69.3 160 30.0
Medtr1g069110 Medicago truncatula HOM05D000448 ORTHO05D000291 3.8e-10 68.9 166 32.5
vmacro20893 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 5.0e-10 68.6 151 29.8
MSTRG.12046 Avicennia marina HOM05D000448 ORTHO05D000291 6.5e-10 68.2 160 28.8
CiPaw.03G111800 Carya illinoinensis HOM05D000448 ORTHO05D000291 6.5e-10 68.2 155 29.7
Medtr7g099570 Medicago truncatula HOM05D000448 ORTHO05D000291 6.5e-10 68.2 146 35.6
TAR626G0212 Trochodendron aralioides HOM05D003596 ORTHO05D004256 6.5e-10 68.2 145 31.7
Glyma.16G005100 Glycine max HOM05D000448 ORTHO05D000291 1.1e-09 67.4 146 28.1
GSVIVG01035440001 Vitis vinifera HOM05D000448 ORTHO05D000291 1.1e-09 67.4 149 32.2
CiPaw.03G112400 Carya illinoinensis HOM05D000448 ORTHO05D000291 1.4e-09 67.0 141 28.4
Phvul.010G133700 Phaseolus vulgaris HOM05D000448 ORTHO05D000291 1.4e-09 67.0 152 29.6
arahy.Tifrunner.gnm1.ann1.FECP0X Arachis hypogaea HOM05D000448 ORTHO05D000291 1.9e-09 66.6 143 35.0
TPR.G7562 Trifolium pratense HOM05D000448 ORTHO05D000291 1.9e-09 66.6 142 35.9
vmacro03799 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 1.9e-09 66.6 151 33.8
Lalb_Chr25g0289651 Lupinus albus HOM05D000448 ORTHO05D000291 2.5e-09 66.2 143 34.3
vmacro03798 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 2.5e-09 66.2 148 31.8
VMungo0331G1843 Vigna mungo HOM05D000448 ORTHO05D000291 2.5e-09 66.2 154 28.6
Glyma.16G005000 Glycine max HOM05D000448 ORTHO05D000291 3.2e-09 65.9 151 26.5
Peaxi162Scf00565g00719 Petunia axillaris HOM05D000448 ORTHO05D000291 3.2e-09 65.9 140 35.0
Peaxi162Scf01938g00005 Petunia axillaris HOM05D000448 ORTHO05D000291 3.2e-09 65.9 140 35.0
Phvul.010G134000 Phaseolus vulgaris HOM05D000448 ORTHO05D000291 4.2e-09 65.5 154 28.6
CANSAT11G0836 Cannabis sativa HOM05D000448 ORTHO05D000291 5.5e-09 65.1 160 27.5
CiPaw.03G112000 Carya illinoinensis HOM05D000448 ORTHO05D000291 5.5e-09 65.1 141 29.1
TPR.G7563 Trifolium pratense HOM05D000448 ORTHO05D000291 5.5e-09 65.1 143 32.2
CSS0011346 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 9.4e-09 64.3 139 32.4
Migut.A00095 Erythranthe guttata HOM05D000448 ORTHO05D000291 9.4e-09 64.3 145 32.4
Medtr8g019450 Medicago truncatula HOM05D000448 ORTHO05D000291 9.4e-09 64.3 129 31.8
Migut.A00096 Erythranthe guttata HOM05D000448 ORTHO05D000291 1.2e-08 63.9 154 31.2
Glyma.13G202000 Glycine max HOM05D000448 ORTHO05D000291 1.2e-08 63.9 155 29.7
Psat3g049960 Pisum sativum HOM05D000448 ORTHO05D012127 1.2e-08 63.9 140 31.4
vmacro03794 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 1.2e-08 63.9 123 34.1
Atru.chr7.1885 Acer truncatum HOM05D000448 ORTHO05D000291 1.6e-08 63.5 111 34.2
Actinidia29315 Actinidia chinensis HOM05D000448 ORTHO05D000291 1.6e-08 63.5 127 33.9
MD12G1213300 Malus domestica HOM05D000448 ORTHO05D000291 2.1e-08 63.2 154 30.5
Sc23g0005360 Simmondsia chinensis HOM05D000448 ORTHO05D000291 2.1e-08 63.2 142 34.5
Hma1.2p1_0732F.1_g210020 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 2.7e-08 62.8 151 33.8
Medtr8g019290 Medicago truncatula HOM05D000448 ORTHO05D000291 2.7e-08 62.8 119 31.1
Atru.chr7.1898 Acer truncatum HOM05D000448 ORTHO05D000291 3.6e-08 62.4 125 30.4
Cpa.g.sc277.5 Carica papaya HOM05D000448 ORTHO05D000291 3.6e-08 62.4 137 32.8
Gorai.010G097800 Gossypium raimondii HOM05D000448 ORTHO05D000291 3.6e-08 62.4 143 29.4
VMungo0331G2013 Vigna mungo HOM05D000448 ORTHO05D000291 3.6e-08 62.4 150 25.3
Migut.A00934 Erythranthe guttata HOM05D000448 ORTHO05D000291 4.6e-08 62.0 148 30.4
Medtr0470s0020 Medicago truncatula HOM05D000448 ORTHO05D000291 4.6e-08 62.0 129 30.2
Medtr8g019050 Medicago truncatula HOM05D000448 ORTHO05D000291 4.6e-08 62.0 129 30.2
QL02p061270 Quercus lobata HOM05D000448 ORTHO05D000291 4.6e-08 62.0 147 32.0
QL02p061382 Quercus lobata HOM05D000448 ORTHO05D000291 4.6e-08 62.0 147 32.0
Actinidia38444 Actinidia chinensis HOM05D000448 ORTHO05D000291 6.1e-08 61.6 153 28.8
Gohir.D06G084400 Gossypium hirsutum HOM05D000448 ORTHO05D000291 6.1e-08 61.6 133 30.8
Nn6g35571 Nelumbo nucifera HOM05D000448 ORTHO05D000291 6.1e-08 61.6 164 28.0
Potri.006G223800 Populus trichocarpa HOM05D000448 ORTHO05D000291 6.1e-08 61.6 153 30.1
Gohir.A06G085200 Gossypium hirsutum HOM05D000448 ORTHO05D000291 7.9e-08 61.2 143 30.1
Cfa007125 Carpinus fangiana HOM05D000448 ORTHO05D000291 1.0e-07 60.8 148 28.4
Ciclev10008164m.g Citrus clementina HOM05D000448 ORTHO05D000291 1.0e-07 60.8 140 32.1
TPR.G28388 Trifolium pratense HOM05D000448 ORTHO05D000291 1.0e-07 60.8 157 26.8
arahy.Tifrunner.gnm1.ann1.9NB33V Arachis hypogaea HOM05D000448 ORTHO05D000291 1.4e-07 60.5 137 33.6
MBI14_g45558_MAGBIO Magnolia biondii HOM05D000448 ORTHO05D000291 1.4e-07 60.5 137 28.5
TPR.G28390 Trifolium pratense HOM05D000448 ORTHO05D000291 1.4e-07 60.5 154 28.6
TAR383G0082 Trochodendron aralioides HOM05D000448 ORTHO05D000291 1.8e-07 60.1 147 29.9
CANSAT56G0856 Cannabis sativa HOM05D000448 ORTHO05D000291 2.3e-07 59.7 128 28.9
CiPaw.15G088600 Carya illinoinensis HOM05D000448 ORTHO05D000291 2.3e-07 59.7 159 26.4
COL.COLO4_35168 Corchorus olitorius HOM05D000448 ORTHO05D000291 2.3e-07 59.7 137 30.7
CANSAT25G2897 Cannabis sativa HOM05D000448 ORTHO05D000291 3.0e-07 59.3 151 32.5
Oeu039515.1 Olea europaea HOM05D000448 ORTHO05D000291 3.0e-07 59.3 156 28.8
QL02p061422 Quercus lobata HOM05D000448 ORTHO05D000291 3.0e-07 59.3 147 30.6
CANSAT56G2866 Cannabis sativa HOM05D000448 ORTHO05D000291 3.9e-07 58.9 152 26.3
Cc06_g19850 Coffea canephora HOM05D000448 ORTHO05D000291 3.9e-07 58.9 103 31.1
Medtr8g019060 Medicago truncatula HOM05D000448 ORTHO05D000291 3.9e-07 58.9 154 27.3
Medtr8g019280 Medicago truncatula HOM05D000448 ORTHO05D000291 3.9e-07 58.9 119 30.3
Nn1g04197 Nelumbo nucifera HOM05D000448 ORTHO05D000291 3.9e-07 58.9 140 32.1
Actinidia27564 Actinidia chinensis HOM05D000448 ORTHO05D000291 5.1e-07 58.5 157 31.8
Duzib150G0219 Durio zibethinus HOM05D000448 ORTHO05D000291 5.1e-07 58.5 164 31.1
FAN20G0495 Fragaria x ananassa HOM05D000448 ORTHO05D000291 5.1e-07 58.5 148 28.4
FAN27G1920 Fragaria x ananassa HOM05D000448 ORTHO05D000291 5.1e-07 58.5 148 28.4
Medtr0514s0010 Medicago truncatula HOM05D000448 ORTHO05D000291 5.1e-07 58.5 125 30.4
RcHm_v2.0_Chr2g0094191 Rosa chinensis HOM05D000448 ORTHO05D000291 5.1e-07 58.5 151 28.5
Thecc.09G059800 Theobroma cacao HOM05D000448 ORTHO05D000291 5.1e-07 58.5 137 30.7
VMungo1383G2601 Vigna mungo HOM05D000448 ORTHO05D000291 5.1e-07 58.5 143 29.4
MSTRG.10528 Avicennia marina HOM05D000448 ORTHO05D000291 6.7e-07 58.2 168 28.6
AUR62009260 Chenopodium quinoa HOM05D000448 ORTHO05D000291 6.7e-07 58.2 129 31.8
Migut.I00414 Erythranthe guttata HOM05D000448 ORTHO05D000291 6.7e-07 58.2 152 28.3
Migut.L01539 Erythranthe guttata HOM05D000448 ORTHO05D000291 6.7e-07 58.2 162 30.2
Medtr8g018980 Medicago truncatula HOM05D000448 ORTHO05D000291 6.7e-07 58.2 116 32.8
Oeu047503.1 Olea europaea HOM05D000448 ORTHO05D000291 6.7e-07 58.2 153 29.4
Duzib168G2236 Durio zibethinus HOM05D000448 ORTHO05D000291 8.8e-07 57.8 158 29.7
FAN24G3054 Fragaria x ananassa HOM05D000448 ORTHO05D000291 8.8e-07 57.8 149 30.2
Thecc.09G082000 Theobroma cacao HOM05D000448 ORTHO05D000291 8.8e-07 57.8 130 29.2
vmacro03797 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 8.8e-07 57.8 135 32.6
vmacro17436 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 8.8e-07 57.8 146 25.3
CANSAT25G3158 Cannabis sativa HOM05D000448 ORTHO05D000291 1.1e-06 57.4 156 29.5
Cpa.g.sc277.6 Carica papaya HOM05D000448 ORTHO05D000291 1.1e-06 57.4 156 30.8
Duzib168G2221 Durio zibethinus HOM05D000448 ORTHO05D000291 1.1e-06 57.4 150 28.0
Migut.B01480 Erythranthe guttata HOM05D000448 ORTHO05D000291 1.1e-06 57.4 154 31.8
Gohir.D06G039500 Gossypium hirsutum HOM05D000448 ORTHO05D000291 1.1e-06 57.4 98 33.7
Prupe.3G142200 Prunus persica HOM05D000448 ORTHO05D000291 1.1e-06 57.4 166 28.3
vmacro03791 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 1.1e-06 57.4 131 31.3
Duzib150G0465 Durio zibethinus HOM05D000448 ORTHO05D000291 1.5e-06 57.0 131 30.5
ECA234G0709 Erigeron canadensis HOM05D000448 ORTHO05D000291 1.5e-06 57.0 129 33.3
Medtr7g055630 Medicago truncatula HOM05D000448 ORTHO05D000291 1.5e-06 57.0 134 29.1
Sc23g0005330 Simmondsia chinensis HOM05D000448 ORTHO05D000291 1.5e-06 57.0 139 30.2
Actinidia03310 Actinidia chinensis HOM05D000448 ORTHO05D000291 2.0e-06 56.6 127 29.9
arahy.Tifrunner.gnm1.ann1.27XKAM Arachis hypogaea HOM05D000448 ORTHO05D000291 2.0e-06 56.6 143 30.1
CSS0002364 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 2.0e-06 56.6 127 29.1
CSS0023530 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 2.0e-06 56.6 127 29.1
CANSAT25G0679 Cannabis sativa HOM05D000448 ORTHO05D000291 2.0e-06 56.6 140 27.9
Phvul.010G133800 Phaseolus vulgaris HOM05D000448 ORTHO05D000291 2.0e-06 56.6 147 23.8
Prupe.1G407000 Prunus persica HOM05D000448 ORTHO05D000291 2.0e-06 56.6 148 30.4
RcHm_v2.0_Chr2g0094201 Rosa chinensis HOM05D000448 ORTHO05D000291 2.0e-06 56.6 163 27.0
Sc23g0005320 Simmondsia chinensis HOM05D000448 ORTHO05D000291 2.0e-06 56.6 152 28.9
Sopen08g017860 Solanum pennellii HOM05D000448 ORTHO05D000291 2.0e-06 56.6 166 28.3
AUR62009255 Chenopodium quinoa HOM05D000448 ORTHO05D000291 2.5e-06 56.2 100 31.0
ECA234G4737 Erigeron canadensis HOM05D000448 ORTHO05D000291 2.5e-06 56.2 129 33.3
FvH4_1g08140 Fragaria vesca HOM05D000448 ORTHO05D000291 2.5e-06 56.2 147 26.5
FAN19G2762 Fragaria x ananassa HOM05D000544 ORTHO05D000291 2.5e-06 56.2 147 26.5
FAN23G0378 Fragaria x ananassa HOM05D000544 ORTHO05D000291 2.5e-06 56.2 148 25.7
FAN28G0857 Fragaria x ananassa HOM05D000448 ORTHO05D000291 2.5e-06 56.2 148 25.7
Gohir.D06G084166 Gossypium hirsutum HOM05D000448 ORTHO05D000291 2.5e-06 56.2 148 27.7
Medtr8g019110 Medicago truncatula HOM05D000448 ORTHO05D000291 2.5e-06 56.2 145 29.7
Medtr8g019260 Medicago truncatula HOM05D000448 ORTHO05D000291 2.5e-06 56.2 145 29.7
Phvul.010G133900 Phaseolus vulgaris HOM05D000448 ORTHO05D000291 3.3e-06 55.8 146 25.3
Psat6g065480 Pisum sativum HOM05D000448 ORTHO05D000291 3.3e-06 55.8 106 33.0
Prupe.2G107700 Prunus persica HOM05D000448 ORTHO05D000291 3.3e-06 55.8 162 28.4
TAR626G0570 Trochodendron aralioides HOM05D000448 ORTHO05D000291 3.3e-06 55.8 116 31.9
Actinidia25224 Actinidia chinensis HOM05D000448 ORTHO05D000291 4.3e-06 55.5 149 27.5
CSS0037448 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 4.3e-06 55.5 148 26.4
Cc08_g01410 Coffea canephora HOM05D000448 ORTHO05D000291 4.3e-06 55.5 125 32.0
Gorai.010G097700 Gossypium raimondii HOM05D000448 ORTHO05D000291 4.3e-06 55.5 148 27.7
Lsat_1_v5_gn_5_78760 Lactuca sativa HOM05D000448 ORTHO05D000291 4.3e-06 55.5 143 30.8
Lj1A655T54 Lonicera japonica HOM05D000448 ORTHO05D000291 4.3e-06 55.5 107 28.0
MD08G1068900 Malus domestica HOM05D000448 ORTHO05D000291 4.3e-06 55.5 158 29.1
MD12G1214700 Malus domestica HOM05D000448 ORTHO05D000291 4.3e-06 55.5 99 32.3
Psat4g184120 Pisum sativum HOM05D000448 ORTHO05D000291 4.3e-06 55.5 115 25.2
Rhsim05G0013100 Rhododendron simsii HOM05D000448 ORTHO05D000291 4.3e-06 55.5 151 28.5
COL.COLO4_35167 Corchorus olitorius HOM05D000448 ORTHO05D000291 5.7e-06 55.1 155 27.1
Eucgr.B00705 Eucalyptus grandis HOM05D000448 ORTHO05D000291 5.7e-06 55.1 159 27.7
Oeu010820.1 Olea europaea HOM05D000448 ORTHO05D000291 5.7e-06 55.1 147 27.9
QL02p000380 Quercus lobata HOM05D000448 ORTHO05D000291 5.7e-06 55.1 147 27.2
SalBow4G0505 Salvia bowleyana HOM05D000448 ORTHO05D000291 5.7e-06 55.1 148 29.7
SalBow4G2869 Salvia bowleyana HOM05D000448 ORTHO05D000291 5.7e-06 55.1 148 29.1
Solyc08g062330.3 Solanum lycopersicum HOM05D000448 ORTHO05D000291 5.7e-06 55.1 166 27.7
SGA_v2.0_scaffold20G09213 Striga asiatica HOM05D000448 ORTHO05D000291 5.7e-06 55.1 132 27.3
CiPaw.04G072700 Carya illinoinensis HOM05D000448 ORTHO05D000291 7.4e-06 54.7 145 31.7
COL.COLO4_00210 Corchorus olitorius HOM05D000448 ORTHO05D000291 7.4e-06 54.7 160 28.1
COL.COLO4_30807 Corchorus olitorius HOM05D000448 ORTHO05D000291 7.4e-06 54.7 153 29.4
Duzib168G1304 Durio zibethinus HOM05D000448 ORTHO05D000291 7.4e-06 54.7 155 29.0
Duzib168G2346 Durio zibethinus HOM05D000448 ORTHO05D000291 7.4e-06 54.7 143 32.2
Eucgr.L00439 Eucalyptus grandis HOM05D000448 ORTHO05D000291 7.4e-06 54.7 150 26.7
Glyma.10G042950 Glycine max HOM05D000448 ORTHO05D000291 7.4e-06 54.7 150 32.0
Hma1.2p1_0231F.1_g097530 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 7.4e-06 54.7 144 31.2
Hma1.2p1_0231F.1_g097610 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 7.4e-06 54.7 144 31.2
Hma1.2p1_0231F.1_g097613 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 7.4e-06 54.7 144 31.2
PGSC0003DMG400013763 Solanum tuberosum HOM05D000448 ORTHO05D000291 7.4e-06 54.7 128 29.7
Thecc.09G132900 Theobroma cacao HOM05D000448 ORTHO05D000291 7.4e-06 54.7 169 26.6
vmacro03789 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 7.4e-06 54.7 131 30.5
Eucgr.C03571 Eucalyptus grandis HOM05D000448 ORTHO05D000291 9.7e-06 54.3 173 26.0
FvH4_2g31330 Fragaria vesca HOM05D000448 ORTHO05D000291 9.7e-06 54.3 139 30.2
FAN20G1233 Fragaria x ananassa HOM05D000448 ORTHO05D000291 9.7e-06 54.3 139 28.8
Gorai.010G043800 Gossypium raimondii HOM05D000448 ORTHO05D000291 9.7e-06 54.3 114 31.6
Hma1.2p1_0196F.1_g085070 Hydrangea macrophylla HOM05D000448 ORTHO05D000291 9.7e-06 54.3 126 31.7
Nn5g28226 Nelumbo nucifera HOM05D000448 ORTHO05D000291 9.7e-06 54.3 107 29.9
SalBow1G7265 Salvia bowleyana HOM05D000448 ORTHO05D000291 9.7e-06 54.3 147 30.6
Sopen08g017880 Solanum pennellii HOM05D000448 ORTHO05D000291 9.7e-06 54.3 137 29.2
Thecc.09G081800 Theobroma cacao HOM05D000448 ORTHO05D000291 9.7e-06 54.3 147 29.3
vmacro17171 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 9.7e-06 54.3 153 28.8


User provided reference genes

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