Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0218701 Helianthus annuus HOM05D007539 ORTHO05D009315 4.7e-117 424.5 206 100.0
Actinidia39861 Actinidia chinensis HOM05D007539 ORTHO05D009315 4.2e-81 305.1 204 73.0
Nitab4.5_0009839g0010 Nicotiana tabacum HOM05D007539 ORTHO05D009315 7.4e-78 294.3 194 74.2
Peaxi162Scf00146g00014 Petunia axillaris HOM05D007539 ORTHO05D009315 1.6e-77 293.1 181 76.8
COL.COLO4_22255 Corchorus olitorius HOM05D007539 ORTHO05D009315 3.7e-77 292.0 195 73.8
ECA238G4618 Erigeron canadensis HOM05D007539 ORTHO05D009315 6.3e-77 291.2 172 80.8
Lj2A124T70 Lonicera japonica HOM05D007539 ORTHO05D009315 4.1e-76 288.5 193 72.5
Sopen10g035220 Solanum pennellii HOM05D007539 ORTHO05D009315 5.3e-76 288.1 173 78.6
Manes.08G015800 Manihot esculenta HOM05D007539 ORTHO05D009315 6.9e-76 287.7 184 75.0
Solyc10g085820.2 Solanum lycopersicum HOM05D007539 ORTHO05D009315 1.5e-75 286.6 173 78.6
Thecc.05G075600 Theobroma cacao HOM05D007539 ORTHO05D009315 1.5e-75 286.6 168 81.0
PGR142G1614 Punica granatum HOM05D007539 ORTHO05D009315 2.6e-75 285.8 194 69.6
Ciclev10009520m.g Citrus clementina HOM05D007539 ORTHO05D009315 3.4e-75 285.4 180 75.6
PGSC0003DMG400008599 Solanum tuberosum HOM05D007539 ORTHO05D009315 3.4e-75 285.4 178 75.3
CAN.G729.5 Capsicum annuum HOM05D007539 ORTHO05D009315 5.9e-75 284.6 172 78.5
Lj5g0010413 Lotus japonicus HOM05D007539 ORTHO05D009315 5.9e-75 284.6 169 78.7
Ca_11568_v3 Cicer arietinum L. HOM05D007539 ORTHO05D009315 1.0e-74 283.9 186 74.2
TWI74G0011 Tripterygium wilfordii HOM05D007539 ORTHO05D009315 1.0e-74 283.9 182 76.4
Psat6g077160 Pisum sativum HOM05D007539 ORTHO05D009315 3.8e-74 282.0 192 71.4
Duzib093G0735 Durio zibethinus HOM05D007539 ORTHO05D009315 5.0e-74 281.6 168 79.8
arahy.Tifrunner.gnm1.ann1.6XWD2H Arachis hypogaea HOM05D007539 ORTHO05D009315 6.5e-74 281.2 172 77.9
arahy.Tifrunner.gnm1.ann1.M3KAW1 Arachis hypogaea HOM05D007539 ORTHO05D009315 6.5e-74 281.2 172 77.9
Cfa016483 Carpinus fangiana HOM05D007539 ORTHO05D009315 1.4e-73 280.0 173 76.3
Aqoxy2G01556 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 1.9e-73 279.6 165 79.4
Aqoxy4G02594 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 1.9e-73 279.6 190 71.6
Cpa.g.sc5.125 Carica papaya HOM05D007539 ORTHO05D009315 1.9e-73 279.6 198 69.2
TPR.G9909 Trifolium pratense HOM05D007539 ORTHO05D009315 1.9e-73 279.6 176 73.9
Gohir.A04G068300 Gossypium hirsutum HOM05D007539 ORTHO05D009315 3.2e-73 278.9 169 79.9
Gorai.009G410900 Gossypium raimondii HOM05D007539 ORTHO05D009315 3.2e-73 278.9 169 79.3
Ah.08g211220 Amaranthus hybridus HOM05D007539 ORTHO05D009315 4.2e-73 278.5 165 77.6
Cc06_g04790 Coffea canephora HOM05D007539 ORTHO05D009315 1.2e-72 276.9 191 70.7
Sc20g0005850 Simmondsia chinensis HOM05D007539 ORTHO05D009315 1.6e-72 276.6 189 71.4
Dinv37358 Davidia involucrata HOM05D007539 ORTHO05D009315 2.1e-72 276.2 185 72.4
Glyma.10G063500 Glycine max HOM05D007539 ORTHO05D009315 2.1e-72 276.2 174 75.3
Nn2g13907 Nelumbo nucifera HOM05D007539 ORTHO05D009315 2.1e-72 276.2 167 78.4
Gohir.D04G106800 Gossypium hirsutum HOM05D007539 ORTHO05D009315 3.6e-72 275.4 169 79.3
Potri.016G096900 Populus trichocarpa HOM05D007539 ORTHO05D009315 3.6e-72 275.4 168 77.4
VMungo0720G2140 Vigna mungo HOM05D007539 ORTHO05D009315 3.6e-72 275.4 174 74.7
EL10Ac7g16719 Beta vulgaris HOM05D007539 ORTHO05D009315 6.1e-72 274.6 169 73.4
Oeu045245.1 Olea europaea HOM05D007539 ORTHO05D009315 6.1e-72 274.6 187 69.0
Prupe.7G122900 Prunus persica HOM05D007539 ORTHO05D009315 7.9e-72 274.2 174 76.4
AUR62042699 Chenopodium quinoa HOM05D007539 ORTHO05D009315 1.3e-71 273.5 172 71.5
Migut.L01732 Erythranthe guttata HOM05D007539 ORTHO05D009315 1.3e-71 273.5 188 71.3
Eucgr.K02419 Eucalyptus grandis HOM05D007539 ORTHO05D009315 1.8e-71 273.1 169 74.0
QL07p041368 Quercus lobata HOM05D007539 ORTHO05D009315 3.0e-71 272.3 171 74.3
Eucgr.K02422 Eucalyptus grandis HOM05D007539 ORTHO05D009315 3.9e-71 271.9 169 73.4
SalBow5G4705 Salvia bowleyana HOM05D007539 ORTHO05D009315 1.5e-70 270.0 166 73.5
BcaB01g05802 Brassica carinata HOM05D007539 ORTHO05D009315 2.5e-70 269.2 168 75.6
Phvul.007G226000 Phaseolus vulgaris HOM05D007539 ORTHO05D009315 3.3e-70 268.9 174 73.0
MD12G1102800 Malus domestica HOM05D007539 ORTHO05D009315 7.4e-70 267.7 191 69.1
MELO3C009408.2 Cucumis melo HOM05D007539 ORTHO05D009315 2.2e-69 266.2 163 76.1
Thhalv10014552m.g Eutrema salsugineum HOM05D007539 ORTHO05D009315 3.7e-69 265.4 168 74.4
Medtr1g062250 Medicago truncatula HOM05D007539 ORTHO05D009315 1.1e-68 263.8 198 66.7
RcHm_v2.0_Chr3g0471301 Rosa chinensis HOM05D007539 ORTHO05D009315 1.1e-68 263.8 186 70.4
CARHR209760 Cardamine hirsuta HOM05D007539 ORTHO05D009315 1.8e-68 263.1 168 72.6
MSTRG.10338 Avicennia marina HOM05D007539 ORTHO05D009315 2.4e-68 262.7 185 67.0
Rhsim03G0085100 Rhododendron simsii HOM05D007539 ORTHO05D009315 3.1e-68 262.3 249 57.0
Sed0004549 Sechium edule HOM05D007539 ORTHO05D009315 3.1e-68 262.3 163 75.5
Os08g0560600 Oryza sativa ssp. japonica HOM05D007539 ORTHO05D009315 9.1e-68 260.8 164 72.6
MBI11_g41953_MAGBIO Magnolia biondii HOM05D007539 ORTHO05D009315 4.5e-67 258.5 169 71.6
unitig_8.g4721 Utricularia gibba HOM05D007539 ORTHO05D009315 4.5e-67 258.5 190 65.8
HPP92_014788 Vanilla planifolia HOM05D007539 ORTHO05D009315 4.5e-67 258.5 167 71.3
CDE02G3922 Ceratophyllum demersum HOM05D007539 ORTHO05D009315 1.0e-66 257.3 173 71.1
CANSAT80G1421 Cannabis sativa HOM05D007539 ORTHO05D009315 1.3e-66 256.9 177 72.3
FAN05G2086 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.7e-66 256.5 185 68.6
Zm00001eb175880 Zea mays HOM05D007539 ORTHO05D009315 1.7e-66 256.5 171 67.3
A03p01240 Brassica napus HOM05D007539 ORTHO05D009315 2.9e-66 255.8 182 68.7
GSVIVG01033714001 Vitis vinifera HOM05D007539 ORTHO05D009315 2.9e-66 255.8 187 67.4
FvH4_6g17220 Fragaria vesca HOM05D007539 ORTHO05D009315 5.0e-66 255.0 170 71.8
PSO339G1895 Papaver somniferum HOM05D007539 ORTHO05D009315 1.4e-65 253.4 169 72.8
FAN14G0473 Fragaria x ananassa HOM05D007539 ORTHO05D009315 4.2e-65 251.9 170 71.2
FAN05G5748 Fragaria x ananassa HOM05D007539 ORTHO05D009315 5.5e-65 251.5 167 71.9
Sabra16G0100100 Salix brachista HOM05D007539 ORTHO05D009315 7.2e-65 251.1 211 61.1
SGA_v2.0_scaffold224G42914 Striga asiatica HOM05D007539 ORTHO05D009315 7.2e-65 251.1 185 65.4
Nitab4.5_0000725g0080 Nicotiana tabacum HOM05D007539 ORTHO05D009315 7.9e-64 247.7 211 60.7
Lalb_Chr02g0155351 Lupinus albus HOM05D007539 ORTHO05D009315 1.0e-63 247.3 152 75.7
ATR0950G005 Amborella trichopoda HOM05D007539 ORTHO05D009315 3.9e-63 245.4 166 70.5
FAN02G2576 Fragaria x ananassa HOM05D007539 ORTHO05D009315 3.9e-63 245.4 170 70.0
CsaV3_3G036460 Cucumis sativus L. HOM05D007539 ORTHO05D009315 1.7e-61 240.0 185 64.9
Ah.12g063350 Amaranthus hybridus HOM05D007539 ORTHO05D009315 4.1e-60 235.3 139 77.0
vmacro07349 Vaccinium macrocarpon HOM05D007539 ORTHO05D009315 5.3e-60 235.0 145 75.9
CiPaw.09G005200 Carya illinoinensis HOM05D007539 ORTHO05D009315 9.1e-60 234.2 143 77.6
Glyma.13G148000 Glycine max HOM05D007539 ORTHO05D009315 5.9e-59 231.5 144 75.7
TAR633G2614 Trochodendron aralioides HOM05D006793 ORTHO05D009315 2.9e-58 229.2 181 64.6
BolC3t12712H Brassica oleracea HOM05D007539 ORTHO05D009315 5.5e-57 224.9 241 50.6
ClCG10G019640 Citrullus lanatus HOM05D007539 ORTHO05D009315 6.1e-56 221.5 147 70.7
Aa31LG1G21630 Aethionema arabicum HOM05D007539 ORTHO05D009315 3.0e-55 219.2 147 71.4
C03p01600 Brassica napus HOM05D007539 ORTHO05D009315 1.5e-54 216.9 139 74.8
BcaB01g05814 Brassica carinata HOM05D007539 ORTHO05D009315 7.4e-54 214.5 139 74.1
Lsat_1_v5_gn_2_18420 Lactuca sativa HOM05D007539 ORTHO05D009315 2.8e-53 212.6 122 82.0
AUR62040192 Chenopodium quinoa HOM05D007539 ORTHO05D009315 1.2e-48 197.2 122 71.3
AL6G13050 Arabidopsis lyrata HOM05D007539 ORTHO05D009315 1.8e-47 193.4 121 73.6
Carub.0006s0239 Capsella rubella HOM05D007539 ORTHO05D009315 1.8e-47 193.4 122 73.0
BraA03t09504Z Brassica rapa HOM05D007539 ORTHO05D009315 2.9e-42 176.0 217 46.1
AagrBONN_evm.TU.Sc2ySwM_117.3355 Anthoceros agrestis HOM05D007539 ORTHO05D009315 3.4e-38 162.5 169 46.2
Mapoly0014s0214 Marchantia polymorpha HOM05D007539 ORTHO05D009315 4.8e-37 158.7 179 45.8
FAN09G1910 Fragaria x ananassa HOM05D007539 ORTHO05D009315 3.4e-30 136.0 77 83.1
QL07p041388 Quercus lobata HOM05D007539 ORTHO05D009315 4.1e-28 129.0 74 74.3
CBR_g37238 Chara braunii HOM05D007539 ORTHO05D009315 1.2e-22 110.9 248 29.8
FAN13G0623 Fragaria x ananassa HOM05D002804 ORTHO05D003755 5.0e-10 68.9 87 54.0
CSS0032451 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 1.6e-08 63.9 90 44.4
CSS0027054 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 2.1e-08 63.5 72 52.8
CSS0044668 Camellia sinensis var. sinensis HOM05D021154 ORTHO05D009315 1.1e-07 61.2 73 50.7


User provided reference genes

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