Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0218401 Helianthus annuus HOM05D007188 ORTHO05D009102 5.5e-110 401.0 201 100.0
Lsat_1_v5_gn_8_20860 Lactuca sativa HOM05D007188 ORTHO05D009102 3.2e-86 322.0 209 81.3
ECA233G0714 Erigeron canadensis HOM05D007188 ORTHO05D009102 4.8e-82 308.1 207 76.3
Actinidia38870 Actinidia chinensis HOM05D007188 ORTHO05D009102 1.1e-62 243.8 179 67.0
CSS0007320 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 1.9e-62 243.0 202 62.4
CSS0035829 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 2.5e-62 242.7 202 61.9
Migut.F01952 Erythranthe guttata HOM05D007188 ORTHO05D009102 5.5e-62 241.5 193 64.2
Aa31LG3G3010 Aethionema arabicum HOM05D007188 ORTHO05D009102 1.6e-61 240.0 175 68.0
CAN.G694.38 Capsicum annuum HOM05D007188 ORTHO05D009102 2.1e-61 239.6 194 63.9
Cc02_g10880 Coffea canephora HOM05D007188 ORTHO05D009102 6.1e-61 238.0 185 69.2
Duzib106G0123 Durio zibethinus HOM05D007188 ORTHO05D009102 6.1e-61 238.0 196 60.2
Gohir.A05G293300 Gossypium hirsutum HOM05D007188 ORTHO05D009102 6.1e-61 238.0 153 72.5
Aqoxy1G01136 Aquilegia oxysepala HOM05D007188 ORTHO05D009102 1.0e-60 237.3 203 61.6
Gohir.D05G294000 Gossypium hirsutum HOM05D007188 ORTHO05D009102 2.3e-60 236.1 153 71.9
SGA_v2.0_scaffold62G21381 Striga asiatica HOM05D007188 ORTHO05D009102 2.3e-60 236.1 155 74.2
Gorai.009G310600 Gossypium raimondii HOM05D007188 ORTHO05D009102 3.0e-60 235.7 153 71.2
GSVIVG01016213001 Vitis vinifera HOM05D007188 ORTHO05D009102 6.8e-60 234.6 152 73.0
Nn6g35269 Nelumbo nucifera HOM05D007188 ORTHO05D009102 8.9e-60 234.2 153 73.9
RhsimUnG0185400 Rhododendron simsii HOM05D007188 ORTHO05D009102 8.9e-60 234.2 148 75.7
MD01G1102700 Malus domestica HOM05D007188 ORTHO05D009102 2.0e-59 233.0 187 63.1
TWI38G2147 Tripterygium wilfordii HOM05D007188 ORTHO05D009102 2.0e-59 233.0 185 65.4
Nitab4.5_0001760g0020 Nicotiana tabacum HOM05D007188 ORTHO05D009102 2.6e-59 232.6 208 60.6
QL08p054189 Quercus lobata HOM05D007188 ORTHO05D009102 2.6e-59 232.6 153 71.9
TAR623G0008 Trochodendron aralioides HOM05D007188 ORTHO05D009102 2.6e-59 232.6 183 65.6
SalBow4G2327 Salvia bowleyana HOM05D007188 ORTHO05D009102 3.4e-59 232.3 175 66.3
Sopen05g034000 Solanum pennellii HOM05D007188 ORTHO05D009102 3.4e-59 232.3 179 66.5
PGSC0003DMG400023370 Solanum tuberosum HOM05D007188 ORTHO05D009102 4.4e-59 231.9 166 68.7
CANSAT56G0643 Cannabis sativa HOM05D007188 ORTHO05D009102 7.5e-59 231.1 213 58.2
Rhsim09G0148000 Rhododendron simsii HOM05D007188 ORTHO05D009102 7.5e-59 231.1 148 75.0
CiPaw.02G171800 Carya illinoinensis HOM05D007188 ORTHO05D009102 9.8e-59 230.7 186 62.4
Solyc05g055550.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 9.8e-59 230.7 151 72.8
Cfa001805 Carpinus fangiana HOM05D007188 ORTHO05D009102 1.3e-58 230.3 185 63.8
A03p36520 Brassica napus HOM05D007188 ORTHO05D009102 1.7e-58 229.9 170 65.3
C03p44120 Brassica napus HOM05D007188 ORTHO05D009102 3.7e-58 228.8 172 64.5
BolC3t16687H Brassica oleracea HOM05D007188 ORTHO05D009102 4.9e-58 228.4 170 65.3
BraA03t12819Z Brassica rapa HOM05D007188 ORTHO05D009102 4.9e-58 228.4 170 64.7
Potri.008G034900 Populus trichocarpa HOM05D007188 ORTHO05D009102 1.1e-57 227.3 184 65.2
Eucgr.G02872 Eucalyptus grandis HOM05D007188 ORTHO05D009102 1.4e-57 226.9 163 66.3
Phvul.007G099300 Phaseolus vulgaris HOM05D007188 ORTHO05D009102 1.4e-57 226.9 200 59.0
Solyc02g033060.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 1.8e-57 226.5 179 65.4
AL3G21760 Arabidopsis lyrata HOM05D007188 ORTHO05D009102 2.4e-57 226.1 165 66.1
Sed0000210 Sechium edule HOM05D007188 ORTHO05D009102 2.4e-57 226.1 196 59.7
AT3G10405 Arabidopsis thaliana HOM05D007188 ORTHO05D009102 3.1e-57 225.7 165 66.1
Peaxi162Scf00176g01519 Petunia axillaris HOM05D007188 ORTHO05D009102 4.1e-57 225.3 214 57.9
Sabra08G0023300 Salix brachista HOM05D007188 ORTHO05D009102 4.1e-57 225.3 173 67.1
CARHR084890 Cardamine hirsuta HOM05D007188 ORTHO05D009102 5.4e-57 224.9 158 69.6
CsaV3_5G036040 Cucumis sativus L. HOM05D007188 ORTHO05D009102 5.4e-57 224.9 191 59.2
arahy.Tifrunner.gnm1.ann1.3RW2WH Arachis hypogaea HOM05D007188 ORTHO05D009102 7.0e-57 224.6 158 67.7
arahy.Tifrunner.gnm1.ann1.CRM3NE Arachis hypogaea HOM05D007188 ORTHO05D009102 7.0e-57 224.6 158 67.7
Glyma.20G183500 Glycine max HOM05D007188 ORTHO05D009102 1.6e-56 223.4 203 59.6
Manes.07G133140 Manihot esculenta HOM05D007188 ORTHO05D009102 1.6e-56 223.4 154 68.8
Thhalv10021497m.g Eutrema salsugineum HOM05D007188 ORTHO05D009102 2.0e-56 223.0 200 58.0
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 3.5e-56 222.2 150 72.7
VMungo0720G2339 Vigna mungo HOM05D007188 ORTHO05D009102 3.5e-56 222.2 174 63.2
Atru.chr12.855 Acer truncatum HOM05D007188 ORTHO05D009102 1.0e-55 220.7 159 68.6
Sp3g08680 Schrenkiella parvula HOM05D007188 ORTHO05D009102 1.3e-55 220.3 158 67.1
MELO3C012404.2 Cucumis melo HOM05D007188 ORTHO05D009102 2.9e-55 219.2 191 58.1
AUR62014280 Chenopodium quinoa HOM05D007188 ORTHO05D009102 5.0e-55 218.4 157 68.8
CDE09G0470 Ceratophyllum demersum HOM05D007188 ORTHO05D009102 1.1e-54 217.2 203 56.7
Carub.0003s0959 Capsella rubella HOM05D007188 ORTHO05D009102 1.9e-54 216.5 158 67.1
unitig_88.g27814 Utricularia gibba HOM05D007188 ORTHO05D009102 3.3e-54 215.7 154 68.2
Lj5g0026151 Lotus japonicus HOM05D007188 ORTHO05D009102 1.2e-53 213.8 205 56.1
Sc06g0002050 Simmondsia chinensis HOM05D007188 ORTHO05D009102 1.2e-53 213.8 146 69.9
Lalb_Chr21g0313651 Lupinus albus HOM05D007188 ORTHO05D009102 1.6e-53 213.4 153 68.0
RcHm_v2.0_Chr1g0362491 Rosa chinensis HOM05D007188 ORTHO05D009102 1.6e-53 213.4 180 60.6
Zm00001eb022660 Zea mays HOM05D007188 ORTHO05D009102 4.7e-53 211.8 153 68.6
TPR.G10293 Trifolium pratense HOM05D007188 ORTHO05D009102 6.1e-53 211.5 152 65.8
PSO063G4012 Papaver somniferum HOM05D007188 ORTHO05D009102 8.0e-53 211.1 194 56.7
Psat6g181120 Pisum sativum HOM05D007188 ORTHO05D009102 8.0e-53 211.1 152 65.8
ClCG05G021230 Citrullus lanatus HOM05D007188 ORTHO05D009102 1.0e-52 210.7 181 58.6
FAN01G3175 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.8e-52 209.9 181 59.1
Ca_10538_v3 Cicer arietinum L. HOM05D007188 ORTHO05D009102 3.1e-52 209.1 156 64.7
Medtr1g094160 Medicago truncatula HOM05D007188 ORTHO05D009102 4.0e-52 208.8 153 64.7
Dinv31237 Davidia involucrata HOM05D007188 ORTHO05D009102 5.2e-52 208.4 147 73.5
Sopen02g011440 Solanum pennellii HOM05D007188 ORTHO05D009102 8.9e-52 207.6 132 75.0
FAN06G0953 Fragaria x ananassa HOM05D007188 ORTHO05D009102 3.4e-51 205.7 179 57.5
FAN06G2123 Fragaria x ananassa HOM05D007188 ORTHO05D009102 3.4e-51 205.7 179 57.5
Os10g0545100 Oryza sativa ssp. japonica HOM05D007188 ORTHO05D009102 4.4e-51 205.3 167 62.3
FAN03G0393 Fragaria x ananassa HOM05D007188 ORTHO05D009102 7.5e-51 204.5 181 57.5
FAN10G2630 Fragaria x ananassa HOM05D007188 ORTHO05D009102 7.5e-51 204.5 179 57.0
Glyma.10G207400 Glycine max HOM05D007188 ORTHO05D009102 1.9e-49 199.9 184 57.6
THA.LOC104826897 Tarenaya hassleriana HOM05D007188 ORTHO05D009102 3.5e-48 195.7 179 57.5
BcaC01g04184 Brassica carinata HOM05D007188 ORTHO05D009102 7.8e-48 194.5 171 57.3
Thecc.10G085100 Theobroma cacao HOM05D007188 ORTHO05D009102 1.5e-46 190.3 119 73.1
COL.COLO4_36178 Corchorus olitorius HOM05D007188 ORTHO05D009102 9.5e-46 187.6 216 51.4
Prupe.2G208300 Prunus persica HOM05D007188 ORTHO05D009102 9.8e-43 177.6 116 71.6
EL10Ac4g08743 Beta vulgaris HOM05D007188 ORTHO05D009102 1.7e-42 176.8 148 60.1
Haze_16743 Corylus avellana HOM05D007188 ORTHO05D009102 2.2e-42 176.4 185 53.0
Mapoly0050s0048 Marchantia polymorpha HOM05D007188 ORTHO05D009102 2.9e-42 176.0 152 55.3
Mapoly0278s0008 Marchantia polymorpha HOM05D007188 ORTHO05D009102 2.9e-42 176.0 152 55.3
Pp3c2_18450 Physcomitrium patens HOM05D007188 ORTHO05D009102 1.9e-41 173.3 176 50.6
vmacro04839 Vaccinium macrocarpon HOM05D007188 ORTHO05D009102 2.4e-41 172.9 141 63.1
Nitab4.5_0000096g0330 Nicotiana tabacum HOM05D007188 ORTHO05D009102 5.4e-41 171.8 179 55.3
Hund14950 Selenicereus undatus HOM05D007188 ORTHO05D009102 1.7e-39 166.8 139 59.0
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 1.9e-33 146.7 147 49.0
Ciclev10033195m.g Citrus clementina HOM05D007188 ORTHO05D009102 1.3e-31 140.6 90 75.6
SMO358G0267 Selaginella moellendorffii HOM05D007188 ORTHO05D009102 3.0e-31 139.4 160 43.8
FvH4_7g18710 Fragaria vesca HOM05D007188 ORTHO05D009102 6.0e-24 115.2 119 49.6
PSO339G6470 Papaver somniferum HOM05D007188 ORTHO05D009102 8.7e-23 111.3 113 53.1
CBR_g28804 Chara braunii HOM05D007188 ORTHO05D009102 1.8e-20 103.6 178 34.3
MCO11G330 Micromonas commoda HOM05D007188 ORTHO05D009102 4.0e-20 102.4 146 34.9
SEGI_08985 Sequoiadendron giganteum HOM05D007188 ORTHO05D009102 4.0e-20 102.4 97 55.7
Cre10.g464650 Chlamydomonas reinhardtii HOM05D007188 ORTHO05D009102 6.6e-15 85.1 148 31.8
PRCOL_00002171 Prasinoderma coloniale HOM05D007188 ORTHO05D009102 6.9e-12 75.1 137 32.8
Rhsim09G0147800 Rhododendron simsii HOM05D007188 ORTHO05D009102 6.9e-12 75.1 207 32.9
FAN10G3168 Fragaria x ananassa HOM05D007188 ORTHO05D009102 7.6e-11 71.6 87 44.8
RhsimUnG0185100 Rhododendron simsii HOM05D007188 ORTHO05D009102 2.2e-10 70.1 182 32.4
Oeu034116.1 Olea europaea HOM05D007188 ORTHO05D009102 1.9e-09 67.0 51 66.7
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 2.4e-09 66.6 48 58.3
AUR62034156 Chenopodium quinoa HOM05D007188 ORTHO05D009102 4.2e-09 65.9 63 55.6
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 3.5e-08 62.8 44 70.5
vmacro04837 Vaccinium macrocarpon HOM05D000026 ORTHO05D000094 4.3e-06 55.8 39 69.2


User provided reference genes

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