Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0218101 Helianthus annuus HOM05D035324 ORTHO05D026229 1.8e-44 182.2 90 100.0
HanXRQChr09g0257311 Helianthus annuus HOM05D001112 ORTHO05D000996 2.4e-17 92.0 49 91.8
ECA232G0295 Erigeron canadensis HOM05D001112 ORTHO05D000996 1.9e-14 82.4 56 75.0
Lsat_1_v5_gn_4_144080 Lactuca sativa HOM05D001112 ORTHO05D000996 3.3e-14 81.6 55 76.4
HanXRQChr05g0136681 Helianthus annuus HOM05D035324 ORTHO05D026229 1.2e-11 73.2 38 89.5
ECA232G3624 Erigeron canadensis HOM05D001112 ORTHO05D000996 2.4e-09 65.5 53 60.4
CSS0000013 Camellia sinensis var. sinensis HOM05D001112 ORTHO05D000996 9.3e-09 63.5 47 68.1
CSS0049231 Camellia sinensis var. sinensis HOM05D001112 ORTHO05D000996 9.3e-09 63.5 47 68.1
CSS0039745 Camellia sinensis var. sinensis HOM05D001112 ORTHO05D000996 2.7e-08 62.0 47 63.8
Dinv40138 Davidia involucrata HOM05D001112 ORTHO05D000996 4.6e-08 61.2 54 53.7
Thecc.01G012700 Theobroma cacao HOM05D001112 ORTHO05D000996 7.8e-08 60.5 47 55.3
Duzib264G0734 Durio zibethinus HOM05D001112 ORTHO05D000996 1.0e-07 60.1 51 56.9
HanXRQChr02g0032841 Helianthus annuus HOM05D035324 ORTHO05D225589 1.0e-07 60.1 38 76.3
Hma1.2p1_0315F.1_g122490 Hydrangea macrophylla HOM05D001112 ORTHO05D000996 1.0e-07 60.1 47 59.6
Manes.02G109500 Manihot esculenta HOM05D001112 ORTHO05D000996 1.0e-07 60.1 47 57.4
Rhsim08G0030700 Rhododendron simsii HOM05D001112 ORTHO05D000996 1.0e-07 60.1 49 55.1
Migut.N01964 Erythranthe guttata HOM05D001112 ORTHO05D000996 1.3e-07 59.7 48 58.3
COL.COLO4_22484 Corchorus olitorius HOM05D001112 ORTHO05D000996 1.7e-07 59.3 89 41.6
Gohir.A11G172500 Gossypium hirsutum HOM05D001112 ORTHO05D000996 1.7e-07 59.3 47 55.3
unitig_26.g9979 Utricularia gibba HOM05D001112 ORTHO05D000996 1.7e-07 59.3 48 64.6
Gohir.D03G006200 Gossypium hirsutum HOM05D001112 ORTHO05D000996 3.0e-07 58.5 47 55.3
Gorai.003G006500 Gossypium raimondii HOM05D001112 ORTHO05D000996 3.0e-07 58.5 47 55.3
Lj2A482T67 Lonicera japonica HOM05D001112 ORTHO05D000996 3.0e-07 58.5 48 60.4
Lj4A224T30 Lonicera japonica HOM05D001112 ORTHO05D000996 3.0e-07 58.5 48 60.4
TWI53G0665 Tripterygium wilfordii HOM05D001112 ORTHO05D000996 3.0e-07 58.5 51 51.0
Atru.chr3.888 Acer truncatum HOM05D001112 ORTHO05D026229 3.9e-07 58.2 48 52.1
Atru.chr3.898 Acer truncatum HOM05D001112 ORTHO05D026229 3.9e-07 58.2 48 52.1
AUR62018008 Chenopodium quinoa HOM05D001112 ORTHO05D000996 3.9e-07 58.2 48 56.2
Dinv40133 Davidia involucrata HOM05D001112 ORTHO05D000996 3.9e-07 58.2 54 50.0
Dinv40135 Davidia involucrata HOM05D001112 ORTHO05D000996 3.9e-07 58.2 54 50.0
Dinv40137 Davidia involucrata HOM05D001112 ORTHO05D000996 5.1e-07 57.8 54 50.0
Gohir.D11G179400 Gossypium hirsutum HOM05D001112 ORTHO05D000996 5.1e-07 57.8 47 53.2
Gorai.007G191400 Gossypium raimondii HOM05D001112 ORTHO05D000996 5.1e-07 57.8 47 53.2
QL06p051437 Quercus lobata HOM05D001112 ORTHO05D000996 5.1e-07 57.8 47 57.4
SGA_v2.0_scaffold81G26079 Striga asiatica HOM05D001112 ORTHO05D000996 8.7e-07 57.0 47 55.3
Cpa.g.sc6.305 Carica papaya HOM05D001112 ORTHO05D000996 1.1e-06 56.6 94 40.4
DCAR_010135 Daucus carota HOM05D001112 ORTHO05D000996 1.1e-06 56.6 47 59.6
Dinv40132 Davidia involucrata HOM05D001112 ORTHO05D000996 1.1e-06 56.6 54 50.0
Migut.N01996 Erythranthe guttata HOM05D001112 ORTHO05D000996 1.1e-06 56.6 47 55.3
Duzib147G1546 Durio zibethinus HOM05D001112 ORTHO05D000996 1.5e-06 56.2 51 52.9
Migut.N01955 Erythranthe guttata HOM05D001112 ORTHO05D000996 1.9e-06 55.8 44 59.1
Gohir.A02G173700 Gossypium hirsutum HOM05D001112 ORTHO05D000996 1.9e-06 55.8 47 53.2
CsaV3_6G047440 Cucumis sativus L. HOM05D001112 ORTHO05D000996 2.5e-06 55.5 91 35.2
Eucgr.I02313 Eucalyptus grandis HOM05D001112 ORTHO05D000996 2.5e-06 55.5 47 57.4
Potri.007G063800 Populus trichocarpa HOM05D001112 ORTHO05D000996 2.5e-06 55.5 66 47.0
Nitab4.5_0006899g0030 Nicotiana tabacum HOM05D001112 ORTHO05D000996 3.3e-06 55.1 54 51.9
Migut.O00920 Erythranthe guttata HOM05D001112 ORTHO05D000996 4.3e-06 54.7 49 55.1
Sc07g0001180 Simmondsia chinensis HOM05D001112 ORTHO05D000996 5.6e-06 54.3 51 56.9
Ah.03g143220 Amaranthus hybridus HOM05D001112 ORTHO05D000996 7.3e-06 53.9 48 54.2
arahy.Tifrunner.gnm1.ann1.D9U3VU Arachis hypogaea HOM05D001112 ORTHO05D000996 7.3e-06 53.9 49 51.0
CANSAT01G1089 Cannabis sativa HOM05D001112 ORTHO05D000996 7.3e-06 53.9 100 33.0
Migut.N01956 Erythranthe guttata HOM05D001112 ORTHO05D000996 7.3e-06 53.9 47 59.6
Migut.O00558 Erythranthe guttata HOM05D001112 ORTHO05D000996 7.3e-06 53.9 47 59.6
Phvul.003G266500 Phaseolus vulgaris HOM05D001112 ORTHO05D000996 7.3e-06 53.9 51 56.9
CiPaw.08G127200 Carya illinoinensis HOM05D001112 ORTHO05D000996 9.6e-06 53.5 76 44.7
MELO3C007936.2 Cucumis melo HOM05D001112 ORTHO05D000996 9.6e-06 53.5 91 34.1
Prupe.7G173900 Prunus persica HOM05D001112 ORTHO05D000996 9.6e-06 53.5 47 53.2
QL06p051422 Quercus lobata HOM05D001112 ORTHO05D000996 9.6e-06 53.5 47 53.2
Sabra07G0052700 Salix brachista HOM05D001112 ORTHO05D000996 9.6e-06 53.5 66 45.5
TWI09G0194 Tripterygium wilfordii HOM05D001112 ORTHO05D000996 9.6e-06 53.5 47 51.1


User provided reference genes

Program Settings